Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone12ag0947 ATGGCGAAAACCGATCTAGAAGTTCTTGATAGCAGGATCGGGATTCTCACAAAACTTCTTGGAAGAATCTACTACCATGTTCCGGGTTCTTCAAAGCCGGGAAGCTTGCCTCCTAATGTTGCTGCTGCTGTTAATGGGGTTGCCCTCTGTGGAACCTTTGCTGGACAACTCTTCTTCGGAAGACTTGGCGATAAGCTCGGAAGAAAACGTGTCTATGGAATCACTCTTCTGCTCATGGTTATCTTCTCGATCGGTTCCGGACTTTCTTTCGGTCCCTCGCCTCAATCCGTCATGAATATTCTCTGCTTTTTCAGGTAA 318 46.86 MAKTDLEVLDSRIGILTKLLGRIYYHVPGSSKPGSLPPNVAAAVNGVALCGTFAGQLFFGRLGDKLGRKRVYGITLLLMVIFSIGSGLSFGPSPQSVMNILCFFR 105
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 8222927 8223281 + Conep12aG0097500.1 Cone12ag0947 449791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone12ag0947 105 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 42 105 - -
Cone12ag0947 105 Gene3D MFS general substrate transporter like domains 11 105 IPR036259 -
Cone12ag0947 105 Pfam Major Facilitator Superfamily 38 104 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Cone12ag0947 105 SUPERFAMILY MFS general substrate transporter 36 94 IPR036259 -
Cone12ag0947 105 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 105 IPR020846 GO:0022857(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0947 Cone-Chr12:8222927 Cone17ag1273 Cone-Chr17:9167568 1.08E-50 dispersed
Cone12ag0947 Cone-Chr12:8222927 Cone20ag0453 Cone-Chr20:2323048 1.99E-52 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone12ag0947 K08176 - rcu:8274096 151.754