Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone12ag0948 ATGGCGGAATATTGGAATAAGAAAACTCGTGGGAGTTTCATCGCTCCTGTTTTCGTTATGCAAGGATTTGGTATTCTAGCCGGTGGCACTATCGCGATCATCGTTGCATCGATCTTCAAGTATTTATACCCTGCACCATCTTATATGGTTGATGCTATTGCCTCTACCGTACCCCAAGCCGATTATGTATGGAGAATAATTCTCATGTTTGGTGCTCTACCTGCTGCTTTGACCTACTATTGGCGTATGAAAATGCCGGAAACTGCCTGTTACCCTGCCCTGGTAGCCCAGGATCGCAACAAGGCTTCTCGTGACATGGAAAAGGTCTTAAATGTTGAGATTGATGAAGGGATTAGTAGACAACAAGACAAAGATCAGGATCAAGAGAATGGAGGAAGAAACTCTTTTAAGCTCTTCTCTAAACCATAG 429 43.59 MAEYWNKKTRGSFIAPVFVMQGFGILAGGTIAIIVASIFKYLYPAPSYMVDAIASTVPQADYVWRIILMFGALPAALTYYWRMKMPETACYPALVAQDRNKASRDMEKVLNVEIDEGISRQQDKDQDQENGGRNSFKLFSKP 142
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 8223413 8223841 + Conep12aG0097600.1 Cone12ag0948 449792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone12ag0948 142 Pfam Sugar (and other) transporter 6 124 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Cone12ag0948 142 SUPERFAMILY MFS general substrate transporter 1 91 IPR036259 -
Cone12ag0948 142 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 2 139 - -
Cone12ag0948 142 MobiDBLite consensus disorder prediction 116 131 - -
Cone12ag0948 142 MobiDBLite consensus disorder prediction 116 142 - -
Cone12ag0948 142 Gene3D MFS general substrate transporter like domains 1 106 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0948 Cone-Chr12:8223413 Cone20ag0453 Cone-Chr20:2323048 7.38E-69 dispersed
Cone12ag0948 Cone-Chr12:8223413 Cone17ag1273 Cone-Chr17:9167568 1.28E-69 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone12ag0948 K08176 - mtr:11432789 184.496