Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone12ag0956 ATGGCTGCCAATCTTGAAGCTGGTAATAACAAACTCTCAAACACCTTAGATGACCATGACAAAACTGACTACTCTCAGAGGGCACAGTGGCTCCGAGCTGCCGTTCTGGGAGCCAATGACGGGTTGGTCTCGGTTGCATCGTTAATGATGGGTGTTGGAGCCGTGAAGAAAGACAGTCGAGCCATGCTGCTTGTTGGGTTCGCGGGGTTAGTAGCAGGAGCTTGTAGCATGGCTATTGGAGAGTTCGTATCAGTTTACACTCAGTATGATATAGAGAAAGCCCAGATGAAGAGAGACAAAGAGAAGAGAAGGAGTAACGATAATGGTGGAGATCAAAGTCGTGAAGATGGAGGTGACTGGGAGAGAGAAAAACTGCCGAGTCCAATTCAGGCTGCGGTAGCATCTGCATTTGCGTTTTCAGTCGGAGCAGTGATGCCGCTCCTAGCTGCAGCATTTATTAGGAGTCATAAAGTGAGGCTTGGGGTGGTGGCTGCAGTGGCTAGTCTGGCACTGGTGGTGTTCGGAGCGGTGGGAGCAAGACTAGGGAACACTCCGATGGGAAAATCCTCCGCAAGAGTGCTTGTAGGAGGATGGATGGCTATGGCTATCACTTTTGGGCTAACCAAGTTAATTGGCACTGCCGGAATGCAAATGTAA 657 49.92 MAANLEAGNNKLSNTLDDHDKTDYSQRAQWLRAAVLGANDGLVSVASLMMGVGAVKKDSRAMLLVGFAGLVAGACSMAIGEFVSVYTQYDIEKAQMKRDKEKRRSNDNGGDQSREDGGDWEREKLPSPIQAAVASAFAFSVGAVMPLLAAAFIRSHKVRLGVVAAVASLALVVFGAVGARLGNTPMGKSSARVLVGGWMAMAITFGLTKLIGTAGMQM 218
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 8261745 8262401 + Conep12aG0098400.1 Cone12ag0956 449800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone12ag0956 218 CDD Nodulin-21 29 185 - -
Cone12ag0956 218 MobiDBLite consensus disorder prediction 96 122 - -
Cone12ag0956 218 MobiDBLite consensus disorder prediction 1 20 - -
Cone12ag0956 218 Pfam VIT family 121 208 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
Cone12ag0956 218 Pfam VIT family 31 106 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
Cone12ag0956 218 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 17 212 IPR008217 GO:0005381(PANTHER)|GO:0005384(PANTHER)|GO:0005384(InterPro)|GO:0006880(PANTHER)|GO:0016020(PANTHER)|GO:0030026(PANTHER)|GO:0030026(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0956 Cone-Chr12:8261745 Cone7ag1445 Cone-Chr7:10230273 1.61E-81 dispersed
Cone12ag0955 Cone-Chr12:8257753 Cone12ag0956 Cone-Chr12:8261745 1.75E-71 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone12ag0956 K22736 - mdm:103433977 251.521