Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone12ag0958 ATGGCCCTCAGCTTGTTTACGTTTCTGTTTAAGATATCAATAATCACCATTTTAATGGGAAATGTTAATATGAAGATCTCTCATTCTCAAAGCCAATTGAGAATCGGTTTCTACGCCCAAACATGTCCTAACGCAGAATCCATTGTTCGAGCCGTAGTCAGAGATGCCGCCGCTTCAGATGCCAATTTGGCCGCCGTTTTGCTCCGACTCCATTTCCACGACTGCTTTGTCGAGGGGTGCGACGCTTCGATTCTGATTGAAAACGCACCGGGCGTTGAGAAAACGGCGTTTGGGCACCAAGGGGTGGGAGGGTTTGGGGTGATAGAGAAGGCCAAACTGGAGTTGGAACAAGCGTGTCGAGGAACTGTTTCGTGCGCTGATATTGTGGCTTTAGCTGCTCGAGAAGCCATTGTTCTGGCAGGTGGACCGGGATACGAGGTGCCGACTGGTCGGAGAGATGGACGGGTTTCGAATGTATCGCTTGCAGACGACATGCCGGATGTGAACGACTCGGTTCAGACGCTTCGGACTAGATTCTTACAGAAGGGTTTAACAGATAAGGACCTTGTCCTGCTCAGTGCTGCACATACAATAGGAACCACGGCATGCTTCTTCATGACAGAAAGGCTCTACAACTTCTCTAATGGAGTCGGGTCGGACCCATCCATAGACCCGATTTTTCTTGGAGAGCTCAAGGCTAGGTGTCCTTTTGACGGACCTAATAATGTTAGATTGCCGATCGATAACGGAAGTGAGAATAAATTCGATAACAAAATCTTGCAAAACATTAGGGAGGGATTTTCCGTGCTTGCTTCCGATGCGAGGCTTAATGATGACCCGTCTACTAAGTCGATCGTCGACTCTTACTTTGGTGCCCTTGATCCATTTTTCGGGCCATCTTTCGAGGCTGATTTCATCGAGTCGATTGTGAAGATGGGTCAGATTGGTGTCAAAACGGGTCTTGATGGTGAAATCAGGCGAGTTTGTGGAGCTTTTAACTAA 1002 48.1 MALSLFTFLFKISIITILMGNVNMKISHSQSQLRIGFYAQTCPNAESIVRAVVRDAAASDANLAAVLLRLHFHDCFVEGCDASILIENAPGVEKTAFGHQGVGGFGVIEKAKLELEQACRGTVSCADIVALAAREAIVLAGGPGYEVPTGRRDGRVSNVSLADDMPDVNDSVQTLRTRFLQKGLTDKDLVLLSAAHTIGTTACFFMTERLYNFSNGVGSDPSIDPIFLGELKARCPFDGPNNVRLPIDNGSENKFDNKILQNIREGFSVLASDARLNDDPSTKSIVDSYFGALDPFFGPSFEADFIESIVKMGQIGVKTGLDGEIRRVCGAFN 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 8270317 8272639 + Conep12aG0098600.1 Cone12ag0958 449802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone12ag0958 333 SUPERFAMILY Heme-dependent peroxidases 32 333 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0958 333 FunFam Peroxidase 166 312 - -
Cone12ag0958 333 Gene3D Peroxidase, domain 2 166 312 - -
Cone12ag0958 333 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Cone12ag0958 333 Pfam Peroxidase 49 289 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0958 333 ProSiteProfiles Plant heme peroxidase family profile. 32 333 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0958 333 FunFam Peroxidase 36 176 - -
Cone12ag0958 333 PANTHER PEROXIDASE 25-RELATED 25 329 IPR000823 GO:0004601(PANTHER)|GO:0004601(InterPro)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Cone12ag0958 333 ProSitePatterns Peroxidases active site signature. 64 75 IPR019794 GO:0004601(InterPro)
Cone12ag0958 333 Gene3D - 36 333 - -
Cone12ag0958 333 CDD secretory_peroxidase 32 332 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cone12ag0958 333 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0958 333 PRINTS Plant peroxidase signature 66 86 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0958 333 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0958 333 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0958 333 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0958 333 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0958 333 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0958 333 PRINTS Plant peroxidase signature 307 320 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0958 333 PRINTS Plant peroxidase signature 42 61 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0958 333 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0958 333 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0958 333 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0958 333 PRINTS Haem peroxidase superfamily signature 64 78 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0958 333 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0958 Cone-Chr12:8270317 Cone8ag0991 Cone-Chr8:9325373 9.26E-95 dispersed
Cone12ag0958 Cone-Chr12:8270317 Cone12ag0959 Cone-Chr12:8329077 4.24E-93 tandem
Cone12ag0958 Cone-Chr12:8270317 Cone8ag0989 Cone-Chr8:9230218 5.17E-161 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone12ag0958 K00430 - cit:102607425 449.514