Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone12ag0959 ATGGAGGGTAGTTTGATCTCTAATACTCGGGCATTGCCCATTTTGATCATTGTATTGCTTGGTCTTGTTGGGTGCAGCCTAGGGAATGGGCAAGGCGGCACGCGTGTCGGATTCTACTCACGTACATGTCCTAGAGCCGAGTCCATTGTTCGGTCCACTGTCGAGTCTCATTTTCGATCTAAACCTACCATCGCTCCCGGCCTTTTGAGGATGCATTTTCATGATTGCTTCGTGCAGGGATGTGATGCTTCCATCCTCATTGATGGCCCAAACACGGAGAAGACTGCACCACCGAACCTTGCGTTGAGAGGTTATGAAGTTATTGATGATGCTAAGACCAAGCTTGAAGCTGCTTGTCCTGGGGTTGTTTCATGTGCAGATATTCTTGCCCTTGCAGCTCGAGACTCCGTTGTCCTGACCAAAGGACTAACTTGGCAAGTGCCTACTGGACGAAGAGATGGTCGGATTTCATTGGCTTCCGATACCTCCAATCTTCCTGGATTCAGAGAATCAGTTGATTCCCAGAAACAAAAGTTCGCTGACAAGGGTCTCAACACTCAAGATCTAGTCACTCTTGTCGGCGGACACACAATCGGCACAGCAGCTTGCACATTGTTCAGTTACCGACTGTACAACTTCACAACAACCACTGCAAGTGGGGCCGACTCCACCATAAACCCTGCATTTGTTCCTCAACTTCGAGCACTTTGCCCACAAAATGGTGACAGGACCGTCCGAGTCGGGTTGGATACCGGAAGTGTCAACAGCTTTGATACGTCTTTCTTTGCAAACATAAGGAATGGACGTGGGGTTTTGGAGTCGGACCAGAAGCTATGGACAGACTCCACAACTCAAAGTATTGTCCAAGGCTTTTTGGGGAGAGGTTCTCGGGTTCTGAACTTCAACAAGGAGTTTGGAAGATCCATGGTGAAGATGAGCAATATCGATGTCAAAACCGGCACTGTCGGTGAAATTAGGAAGATTTGCTCTGCAATTAACTAA 1002 48.2 MEGSLISNTRALPILIIVLLGLVGCSLGNGQGGTRVGFYSRTCPRAESIVRSTVESHFRSKPTIAPGLLRMHFHDCFVQGCDASILIDGPNTEKTAPPNLALRGYEVIDDAKTKLEAACPGVVSCADILALAARDSVVLTKGLTWQVPTGRRDGRISLASDTSNLPGFRESVDSQKQKFADKGLNTQDLVTLVGGHTIGTAACTLFSYRLYNFTTTTASGADSTINPAFVPQLRALCPQNGDRTVRVGLDTGSVNSFDTSFFANIRNGRGVLESDQKLWTDSTTQSIVQGFLGRGSRVLNFNKEFGRSMVKMSNIDVKTGTVGEIRKICSAIN 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 8329077 8330298 - Conep12aG0098700.1 Cone12ag0959 449803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone12ag0959 333 Gene3D Peroxidase, domain 2 166 312 - -
Cone12ag0959 333 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0959 333 PRINTS Haem peroxidase superfamily signature 65 79 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0959 333 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0959 333 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0959 333 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0959 333 PRINTS Plant peroxidase signature 248 263 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0959 333 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0959 333 PRINTS Plant peroxidase signature 67 87 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0959 333 PRINTS Plant peroxidase signature 264 281 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0959 333 PRINTS Plant peroxidase signature 43 62 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0959 333 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0959 333 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0959 333 PRINTS Plant peroxidase signature 307 320 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0959 333 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0959 333 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Cone12ag0959 333 PANTHER PEROXIDASE 25-RELATED 23 329 IPR000823 GO:0004601(PANTHER)|GO:0004601(InterPro)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Cone12ag0959 333 ProSiteProfiles Plant heme peroxidase family profile. 33 333 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0959 333 SUPERFAMILY Heme-dependent peroxidases 35 333 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0959 333 Pfam Peroxidase 50 291 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0959 333 Gene3D - 37 333 - -
Cone12ag0959 333 FunFam Peroxidase 37 167 - -
Cone12ag0959 333 ProSitePatterns Peroxidases active site signature. 65 76 IPR019794 GO:0004601(InterPro)
Cone12ag0959 333 CDD secretory_peroxidase 35 332 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cone12ag0959 333 FunFam Peroxidase 166 312 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0959 Cone-Chr12:8329077 Cone8ag0991 Cone-Chr8:9325373 2.29E-226 dispersed
Cone12ag0958 Cone-Chr12:8270317 Cone12ag0959 Cone-Chr12:8329077 4.24E-93 tandem
Cone12ag0959 Cone-Chr12:8329077 Cone12ag0960 Cone-Chr12:8332212 2.60E-214 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone12ag0959 K00430 - cit:102624908 503.827