Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone12ag0960 ATGGAGGGTGATTTGATCAGCAAGATTCAGGGAGTACCCATTTTGATCATTATATTGCTTGCTCTTGTTGGGTGCAGTACCCTAGTTCACGGGCAAGCTGGTCCACGTGTCGGGTTCTATAAACGTTCATGTCCTAGAGCCGAGTCCATTATTCAGTCGACCGTTAAGTCTCATTTCCGATCTAAACCTACCATTGCTCCCGGCCTGTTGAGGATGCACTTTCATGATTGCTTCGTGCAGGGATGCGACGGTTCCATCCTCATAGATGGCCCAAACACTGAGAAGACTGCCATACCGAACCTTGCTTTGAGAGGTTATGAAGTCATTGATGATGCAAAGGCAAAGCTTGAAGCTGCATGCCCTGGAGTTGTTTCTTGCGCTGACATTCTTGCACTTGCCGCTCGCGACTCCGTTGTTCTGACCAAAGGAATAACTTGGCAAGTGCCTACTGGACGAAGAGATGGTCGGGTTTCATTGGCTTCCGATACCTCCAATCTGCCTGGATTCAGAGAATCAGTTGATTCCCAGAAGCAAAAGTTTGCTGACAAGGGTCTCAACACTCAAGATCTAGTCGCTCTTGTCGGCGGACACACAATAGGCACAGCAGCTTGCTCGTTGTTCAGATACAGACTCTACAACTTCACAAATACCACTACAAGTGGGGCTGACTCCAGCATAGACCCCTCATTTGTTCCTCAACTCCAAGCACTTTGCCCACAAAATGGTGACGGGACGGTCCGGGTCGGGTTGGATACCCGAAGCGTCAACAGCTTCGATACGTCTTTCTTTGCAAACTTAAGGAATGGACGTGGGGTTTTGGAGTCTGACCAGAAGCTATGGACAGACACCACAACTCAAACTATTGTCCAAGCCTTTTTGAAGAGAGGCTCCCGGGGTTTGAACTTCAACAAGGAGTTTGGAAGATCCATGGTGAAGATGAGCAATATCGGCATCAAAACCGGCACTATCGGTGAAATTCGCAAGATTTGCTCTGCAATTAACTGA 1005 48.26 MEGDLISKIQGVPILIIILLALVGCSTLVHGQAGPRVGFYKRSCPRAESIIQSTVKSHFRSKPTIAPGLLRMHFHDCFVQGCDGSILIDGPNTEKTAIPNLALRGYEVIDDAKAKLEAACPGVVSCADILALAARDSVVLTKGITWQVPTGRRDGRVSLASDTSNLPGFRESVDSQKQKFADKGLNTQDLVALVGGHTIGTAACSLFRYRLYNFTNTTTSGADSSIDPSFVPQLQALCPQNGDGTVRVGLDTRSVNSFDTSFFANLRNGRGVLESDQKLWTDTTTQTIVQAFLKRGSRGLNFNKEFGRSMVKMSNIGIKTGTIGEIRKICSAIN 334
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 8332212 8333425 - Conep12aG0098800.1 Cone12ag0960 449804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone12ag0960 334 FunFam Peroxidase 38 179 - -
Cone12ag0960 334 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0960 334 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0960 334 PRINTS Haem peroxidase superfamily signature 251 266 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0960 334 PRINTS Haem peroxidase superfamily signature 66 80 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0960 334 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0960 334 Pfam Peroxidase 52 293 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0960 334 Gene3D - 38 334 - -
Cone12ag0960 334 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Cone12ag0960 334 Gene3D Peroxidase, domain 2 167 313 - -
Cone12ag0960 334 PANTHER PEROXIDASE 25-RELATED 23 330 IPR000823 GO:0004601(PANTHER)|GO:0004601(InterPro)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Cone12ag0960 334 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0960 334 PRINTS Plant peroxidase signature 265 282 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0960 334 PRINTS Plant peroxidase signature 44 63 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0960 334 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0960 334 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0960 334 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0960 334 PRINTS Plant peroxidase signature 249 264 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0960 334 PRINTS Plant peroxidase signature 68 88 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0960 334 PRINTS Plant peroxidase signature 308 321 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0960 334 ProSitePatterns Peroxidases active site signature. 66 77 IPR019794 GO:0004601(InterPro)
Cone12ag0960 334 SUPERFAMILY Heme-dependent peroxidases 36 334 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0960 334 FunFam Peroxidase 167 313 - -
Cone12ag0960 334 CDD secretory_peroxidase 34 333 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cone12ag0960 334 ProSiteProfiles Plant heme peroxidase family profile. 34 334 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0960 Cone-Chr12:8332212 Cone8ag0992 Cone-Chr8:9328359 1.40E-216 dispersed
Cone12ag0959 Cone-Chr12:8329077 Cone12ag0960 Cone-Chr12:8332212 2.60E-214 tandem
Cone12ag0960 Cone-Chr12:8332212 Cone12ag0961 Cone-Chr12:8336470 1.58E-168 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone12ag0960 K00430 - cit:102624908 500.36