Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone12ag0961 ATGGAAGCTTCACCAATCAGAAAGACATCATTCGCTATGTTGCTACTCATCTTCATTGCTTCCATGGTCGCCACCACGGCGCAAGGACAAGGGACTCGTGTGGGGTTCTATTCCAAAACATGTCCTACAGCCGAATCAATTGTTAGGTCAACAGTCGGAGCTCATTTCAAGACCGATCCAACTGTTGCTCCGGGTCTCTTAAGAATGCACTTCCATGACTGCTTTGTCCAAGGCTGCGACAGCTCCGTCCTTATTAGCGGGCCCGGCACTGAGAAAACTGCCGGTCCTAATCTCGGATTAAGAGGATATGAAGTTATTGACGATGCCAAAACCCAGCTTGAAGCTGCTTGCCCCGGTGCTGTCTCTTGTGCTGATATTCTTGCTCTTGCTGCTCGTGACTCCGTTGTTCTGACTAGTGGAGCAAGCTGGGCAGTGCCTACCGGACGCAGAGATGGGAGAATCTCTCGAGCATCCGATGCTTCTAATTTGCCCGGATTCACAGACTCCGTCGATGTTCAGAAGCAAAAGTTCGCTGCACTTGGTCTCAACACTCAAGACCTTGTAACCCTTCTTGGAGGGCACACAATTGGAACCAGTGCATGCCAATTTTTTAGGTACAGATTATATAATTTCACTACAAGTGGAAACGGTGCCGACACATCTATCGCTGCGTCGTTCGTTTCTACCTTGAGAGCACTCTGCCCTGAAAATGGTGATGCCACCAAGCGGGTCGGGCTTGATAATGGCAGCCAAACCAAGTTTGATACGTCGTTTTATGCAAACTTGAGAAGCGGCCGGGGAGTGCTTGAGTCGGACCAAAAGCTGTGGACTGATGCTTCTACAAGATCATTCGTACAAGGTTTCTTGGGTGCTGGTTCTCAAAAGTTGAACTTCAACGTCGAGTTTGGAAAATCAATGGTGAAGATGAGTAACATTGGAGTGAAGACCGGAACTAATGGCGAGATTCGCAAAATTTGTTCTGCCATAAACTAA 993 48.24 MEASPIRKTSFAMLLLIFIASMVATTAQGQGTRVGFYSKTCPTAESIVRSTVGAHFKTDPTVAPGLLRMHFHDCFVQGCDSSVLISGPGTEKTAGPNLGLRGYEVIDDAKTQLEAACPGAVSCADILALAARDSVVLTSGASWAVPTGRRDGRISRASDASNLPGFTDSVDVQKQKFAALGLNTQDLVTLLGGHTIGTSACQFFRYRLYNFTTSGNGADTSIAASFVSTLRALCPENGDATKRVGLDNGSQTKFDTSFYANLRSGRGVLESDQKLWTDASTRSFVQGFLGAGSQKLNFNVEFGKSMVKMSNIGVKTGTNGEIRKICSAIN 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 8336470 8337673 - Conep12aG0098900.1 Cone12ag0961 449805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone12ag0961 330 ProSitePatterns Peroxidases active site signature. 63 74 IPR019794 GO:0004601(InterPro)
Cone12ag0961 330 FunFam Peroxidase 35 176 - -
Cone12ag0961 330 Pfam Peroxidase 48 288 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0961 330 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0961 330 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0961 330 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0961 330 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0961 330 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0961 330 CDD secretory_peroxidase 33 329 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cone12ag0961 330 ProSiteProfiles Plant heme peroxidase family profile. 31 330 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0961 330 Gene3D Peroxidase, domain 2 164 309 - -
Cone12ag0961 330 FunFam Peroxidase 164 309 - -
Cone12ag0961 330 PANTHER PEROXIDASE 25-RELATED 22 326 IPR000823 GO:0004601(PANTHER)|GO:0004601(InterPro)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Cone12ag0961 330 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0961 330 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0961 330 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0961 330 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0961 330 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0961 330 PRINTS Plant peroxidase signature 304 317 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0961 330 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0961 330 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0961 330 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0961 330 Gene3D - 35 330 - -
Cone12ag0961 330 SUPERFAMILY Heme-dependent peroxidases 33 330 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0961 330 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0961 Cone-Chr12:8336470 Cone8ag0990 Cone-Chr8:9320744 2.55E-195 dispersed
Cone12ag0960 Cone-Chr12:8332212 Cone12ag0961 Cone-Chr12:8336470 1.58E-168 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone12ag0961 K00430 - rcu:8258720 503.056