Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone12ag1009 ATGGCTACCGCTGCGTTGCTCCGTTCTTTGCGACAGCGTGATGTCGTTTCTACTTCTCTTTCCGCTTACCGATCCTTAACTGGAAATTCCAAGCCGTCATGGGTACAATCCCATATTGGACAAAAATGGGCAAGTTTGGCTAGACCATTCAGTTCAAAATCATCTGGGAACGATGTAATTGGTATTGACTTGGGTACCACCAACTCTTGCGTTGCAGTTATGGAGGGGAAGACTCCCAAAGTTATTGAGAATTCTGAGGGAGCTAGGACCACTCCATCTGTTGTTGCTTTCAACCAGAAAGGAGAACTCCTTGTGGGTACTCCAGCCAAGCGTCAGGCTGTGACTAACCCAACAAACACTGTTTTCGGGACTAAACGTCTGATTGGTAGACGCTTTAATGATCCTCAAACTCAAAAGGAGATGAAAATGGTTCCTTACAAAATTGTCAAGGCCCCAAATGGAGATGCTTGGGTTGAAGTCAACAGTCAGCAGTATTCACCGAGTCAAATTGGAGCTTTCATCCTGACCAAGATGAAGGAAACTGCAGAGGCTTACCTTGGTAAGTCCGTTTCAAAGGCTGTGATCACTGTGCCTGCTTATTTTAATGATGCACAAAGACAAGCAACCAAGGATGCTGGGAGAATTGCTGGCCTTGATGTAATGAGGATCATTAATGAGCCCACAGCAGCTGCACTTTCTTATGGAATGAACAATAAGGAGGGTCTCATTGCAGTGTTTGATCTTGGAGGTGGTACATTTGATGTATCCATTCTAGAGATTTCTAATGGTGTCTTTGAGGTGAAAGCGACAAATGGCGACACTTTCTTGGGAGGAGAGGATTTTGACAATGCCTTGTTGGACTTCTTAGTTAGTGAATACAAGAGAACCGAGGCCATAGACCTTTCCAAAGACAGGCTTGCATTGCAGAGGCTCAGAGAAGCAGCAGAAAAAGCGAAGATAGAGCTCTCATCAACATCCCAAACCGAAATTAACCTCCCATTCATTACAGCCGATGCATCTGGTGCGAAACATCTGAACATCACTCTAACTAGATCAAAGTTTGAAAGCCTTGTAAATGACTTAATTGAGAGGACAAAGGCTCCCTGTAAGAACTGTTTGAAGGATGCTGGGATATCCACCAAGGAGGTAGATGAGGTACTTCTTGTGGGTGGAATGACCCGTGTACCAAAAGTACAAGAAGTGGTTGCAGAGATATTCGGGAAGAGCCCCAGCAAAGGAGTAAACCCAGATGAAGCAGTTGCTCTAGGAGCTGCTATCCAGGGAGGTATTCTCCGTGGAGATGTTAAAGAACTCCTTCTCCTAGACATTACACCTTTATCTCTAGGTATAGAAACCTTAGGTGGCATATTCACAAAGCTGATCGGGCGAAACACTACTATTCCCACAAAGAAAAGCCAGGTGTTTTCAACTGCAGCTGATAATCAAACTCAAGTGGGTATTAAGGTACTTCAAGGAGAGAGAGAAATGGCTTCTGACAATAAGCTTCTAGGAGAATTCGATCTCGTGGGTATACCTCCTGCTCCTAGAGGATTACCTCAGATTGAGGTCACTTTTGACATTGATGCAAATGGGATTGTGACCGTCTCTGCAAAGGACAAAGCGACAGGGAAAGAACAGCAGATCACTATTCGATCGTCTGGAGGCCTATCTGAAGATGAAATAGATAAGATGGTTAAAGAAGCAGAGTTGCATGCTCAAAGGGATCAAGAGAGGAAGGCTTTGATTGATATTAGAAACAGTGCAGATACGACAATATACAGTATAGAGAAGAGCTTGAGCGAGTATAGGGAGAAGATACCAAGTGAGGTGGCGAAAGAGATTGAAGATGCAGTGGCGGATTTGAGAAAAGAAATGGCAGAGGATGATGTGGAGGCTATTAAGTCGAAGCTTGATGCTGCTAATAAAGCCGTATCAAAGATTGGTCAACATATGGCCGGTGGGTCCGGTGGTGGCGGCTCAGCTGGTGGTGATCAGGCCCCTGACGCAGAATATGAAGAGGTCAAGAAGTAA 2031 44.81 MATAALLRSLRQRDVVSTSLSAYRSLTGNSKPSWVQSHIGQKWASLARPFSSKSSGNDVIGIDLGTTNSCVAVMEGKTPKVIENSEGARTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTVFGTKRLIGRRFNDPQTQKEMKMVPYKIVKAPNGDAWVEVNSQQYSPSQIGAFILTKMKETAEAYLGKSVSKAVITVPAYFNDAQRQATKDAGRIAGLDVMRIINEPTAAALSYGMNNKEGLIAVFDLGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNALLDFLVSEYKRTEAIDLSKDRLALQRLREAAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSKFESLVNDLIERTKAPCKNCLKDAGISTKEVDEVLLVGGMTRVPKVQEVVAEIFGKSPSKGVNPDEAVALGAAIQGGILRGDVKELLLLDITPLSLGIETLGGIFTKLIGRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKLLGEFDLVGIPPAPRGLPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSEDEIDKMVKEAELHAQRDQERKALIDIRNSADTTIYSIEKSLSEYREKIPSEVAKEIEDAVADLRKEMAEDDVEAIKSKLDAANKAVSKIGQHMAGGSGGGGSAGGDQAPDAEYEEVKK 676
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 8532946 8536296 + Conep12aG0103700.1 Cone12ag1009 449853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone12ag1009 676 PRINTS 70kDa heat shock protein signature 437 456 - -
Cone12ag1009 676 PRINTS 70kDa heat shock protein signature 518 534 - -
Cone12ag1009 676 PRINTS 70kDa heat shock protein signature 58 71 - -
Cone12ag1009 676 PRINTS 70kDa heat shock protein signature 251 261 - -
Cone12ag1009 676 PRINTS 70kDa heat shock protein signature 414 434 - -
Cone12ag1009 676 PRINTS 70kDa heat shock protein signature 109 117 - -
Cone12ag1009 676 PRINTS 70kDa heat shock protein signature 193 213 - -
Cone12ag1009 676 PRINTS 70kDa heat shock protein signature 383 399 - -
Cone12ag1009 676 PRINTS 70kDa heat shock protein signature 86 98 - -
Cone12ag1009 676 FunFam Molecular chaperone DnaK 556 655 - -
Cone12ag1009 676 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 431 555 IPR029047 -
Cone12ag1009 676 SUPERFAMILY Actin-like ATPase domain 59 239 IPR043129 -
Cone12ag1009 676 ProSitePatterns Heat shock hsp70 proteins family signature 3. 386 400 IPR018181 -
Cone12ag1009 676 FunFam Chaperone protein DnaK HSP70 427 610 - -
Cone12ag1009 676 Gene3D - 556 653 IPR029048 -
Cone12ag1009 676 Coils Coil 611 643 - -
Cone12ag1009 676 SUPERFAMILY Actin-like ATPase domain 240 431 IPR043129 -
Cone12ag1009 676 FunFam Molecular chaperone DnaK 60 241 - -
Cone12ag1009 676 Pfam Hsp70 protein 59 651 IPR013126 GO:0005524(InterPro)|GO:0140662(InterPro)
Cone12ag1009 676 Hamap Chaperone protein DnaK [dnaK]. 56 674 IPR012725 GO:0005524(InterPro)|GO:0006457(InterPro)|GO:0051082(InterPro)
Cone12ag1009 676 MobiDBLite consensus disorder prediction 648 676 - -
Cone12ag1009 676 CDD HSPA9-like_NBD 56 431 - -
Cone12ag1009 676 ProSitePatterns Heat shock hsp70 proteins family signature 1. 62 69 IPR018181 -
Cone12ag1009 676 ProSitePatterns Heat shock hsp70 proteins family signature 2. 245 258 IPR018181 -
Cone12ag1009 676 PANTHER HEAT SHOCK PROTEIN 70KDA 59 614 IPR013126 GO:0005524(InterPro)|GO:0005737(PANTHER)|GO:0005739(PANTHER)|GO:0140662(InterPro)
Cone12ag1009 676 Gene3D Actin; Chain A, domain 4 278 365 - -
Cone12ag1009 676 FunFam Molecular chaperone DnaK 278 365 - -
Cone12ag1009 676 Coils Coil 301 328 - -
Cone12ag1009 676 FunFam Heat shock protein 9 122 173 - -
Cone12ag1009 676 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 433 589 IPR029047 -
Cone12ag1009 676 Gene3D - 60 428 - -
Cone12ag1009 676 FunFam Chaperone protein HscA homolog 242 302 - -
Cone12ag1009 676 NCBIfam molecular chaperone DnaK 59 651 IPR012725 GO:0005524(InterPro)|GO:0006457(InterPro)|GO:0051082(InterPro)
Cone12ag1009 676 Gene3D - 235 415 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag1009 Cone-Chr12:8532946 Cone3ag0942 Cone-Chr3:4892431 3.39E-227 dispersed
Cone8ag1036 Cone-Chr8:9570545 Cone12ag1009 Cone-Chr12:8532946 4.55E-304 transposed
Cone10ag1084 Cone-Chr10:7522206 Cone12ag1009 Cone-Chr12:8532946 0 wgd
Cone12ag1009 Cone-Chr12:8532946 Cone3ag1071 Cone-Chr3:29369223 0 wgd
Cone12ag1009 Cone-Chr12:8532946 Cone8ag1035 Cone-Chr8:9569340 8.19E-25 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone12ag1009 K04043 - csv:101216102 1202.19