Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone12ag1015 ATGTTGGAATCATTAACCTGTTTCCATAGCTCTAAAGGATATGATATTATTAAGCAAAGGAATCTAACTGGGGTTAACTCATACACTACTAGTTCAAGATTGTATACTTATTCTTGCTGTAAGAAAGTGCCATCATCATCCTTTACCACGAAAAACAGCGCAAATCATTACTGTTTTGTCTCCAGAGTCGTCCATAATGATACTTCACCCCTATTTTCCTCGAAATCTGGTTGGAGATTCTACTACTTACAGAACCATAAACCGTGCGCTAGAGAAAGATTCCTAACATATTCAACTCTTGAAGTTGCCAGTGCTGTTGATGTCATCAATGATTTAGGGTTGGATACATTGACATTTCTTGCCGTTACTGTCATGGTCGTACCTGCATTCAGGATAATCAAAGCTAGCCCTATACTGGGTTTCTTCTTTGCTGGAGTTATGCTCAATCAGTTTGGTGTAATTAGAAATCTTACAGATGTTAAAGTTCTTTCTGAATGGGGGATCCTTTTCTTGTTATTTGAGATGGGCTTAGAGCTTTCATTTGCACGGCTAAAAGCTCTTGCAAAATTTGCCTTTGGAATGGGACTGACACAGGTCGTGTTATGTACTCTTGCTTTCACAGCATTTGAGCTTCCCCCTAATGGGGCCATTGGAACAAGAATCTTGGAGTTCCTTTTTCACTCCCGGTCTGACTTGGTTAACATCAGAAGCATTGATGAAGCTGTAGTGATAGGTGCTGCTCTCTCTCTGTCTTCTTCTGCTTTTGTTCTTCAGCTTCTTGCAGAGAAAGGTGAGCTTCCAACAAGATTTGGCTCAGCAACTCTGGGGATTCTTCTCTTACAGGACATTGCAGTTGTCCCTCTCTTAGTCATACTTCCTGTTCTAGAGAGTCAGAATCTGGTAGAAGAAAGTGTTTGGCCAATGCTTGCTAAAGAAAGTTTGAAGGCCTTGGGAGGACTGGGTCTGCTTTCTCTTGGAGGGAAGTTTCTTCTTAGGCGAGTTTTTGAGTTTGTGGCAGAAGCAAGGAGTTCGGAAGCTTTTGTTGCTCTTTGCCTACTTACAGTTGCTGGCACTTCGCTTCTCACCCAGAAGTTGGGCTTCAGTGATACACTTGGAGCATTTTTGGCGGGGGCATTATTAGCTGAAACTAATTTCAGGACACAGATCGAAGCAGATATCAGACCTTTTAGAGGTTTACTCCTTGGGTTGTTCTTTGTGACCACAGGAACCTCCATTGACATGCAGCTTCTTTTGCGAGAATGGCCAAATGTACTCTCACTCTTAGCAGGTTTAATTGTTATCAAGACACTGATAATAACAGCCATAGGACCCCGTGTGGGGCTCACACTACAAGAAAGTGTAAGAATAGGATTACTTCTATCACAAGGAGGCGAGTTTGGATTTGTAGTTTTTTCTCTAGCCAACAGGCTTGGAGTGCTTCCACTTGAGCTTAACAAGCTTCTCATAATCGTTGTTGTGCTTTCAATGGCATTAACCCCAGTGCTTAATGAAGCTGGAAGAAAAGCAGCCGAATTAATCGATCAAAAGCTTGATGAAGTTGATAAAGCTCCGGACATGGTTAATTTTGATGCTGCCGAACCTGTAATCATTCTTGGATTTGGACAAATGGGCCAGGTGCTTGCAAATTTCTTATCTGCCCCATTAGCTTCTGGAGGGGAGGGCGATGTTGCGGGATGGCCTTATGTAGCTTTTGATCTCGACCCTTCTGTTGTTAAAGCATCTAGAGACCTTGGTTTTCCTATTCTTTATGGGGATGGATCAAGACCAGCCGTTCTTCAATCTGCTGGAATCTCTTCCCCAAAAGCTGTTATGGTTATGTACACAGGCCGGAGCAGAACAATGGAAGCTGTTCAAAGGCTTAGATCTGCTTTCCCTGCTATCCCAATATATGCAAGAGCTCAAGACCTTGTTCATCTCTTAGAGCTAAAGAAAGCAGGTGCAACTGATGCCATTCTAGAAGATGCCGAGACCAGTTTACAGCTTGGCTCTAAGCTCTTGAAGGGGCTGGGTGTGATGTCAGATGATGTCACTTTTCTGAGTCAGCTTGTCCGGAATTCAATGGAGTTACAAGCTCAAGAAGCACTTGACAAAACCAACGAACAGGATTTAGATTCCATGAAGCCATTACAGGTGAGAGTTGGTGATTTGATTGGGACTCGACTGCCTGCTTCGGTTTCTTCACCGGAAGCAAAAATGTTGCTGGTGAATCAGGCAGCAGATTCTCATATTTTACGGATTCAAAGGGAAGTAGAGGGTGGTTCTGTGATCAAGCTGTCTCCTGATGATTTAGAAGAAGGGAAGGGAGTTTTGTATTGTGAACTTGATGCAACAGACAATAATAACAATTTCTCCCTTAACTCTGGCGAAAAGGAAGATAAACATGTCGTGGACCAGTTAATGCCGTGCATTACGACCATCACGGAGGAATCATCTTAA 2457 42.94 MLESLTCFHSSKGYDIIKQRNLTGVNSYTTSSRLYTYSCCKKVPSSSFTTKNSANHYCFVSRVVHNDTSPLFSSKSGWRFYYLQNHKPCARERFLTYSTLEVASAVDVINDLGLDTLTFLAVTVMVVPAFRIIKASPILGFFFAGVMLNQFGVIRNLTDVKVLSEWGILFLLFEMGLELSFARLKALAKFAFGMGLTQVVLCTLAFTAFELPPNGAIGTRILEFLFHSRSDLVNIRSIDEAVVIGAALSLSSSAFVLQLLAEKGELPTRFGSATLGILLLQDIAVVPLLVILPVLESQNLVEESVWPMLAKESLKALGGLGLLSLGGKFLLRRVFEFVAEARSSEAFVALCLLTVAGTSLLTQKLGFSDTLGAFLAGALLAETNFRTQIEADIRPFRGLLLGLFFVTTGTSIDMQLLLREWPNVLSLLAGLIVIKTLIITAIGPRVGLTLQESVRIGLLLSQGGEFGFVVFSLANRLGVLPLELNKLLIIVVVLSMALTPVLNEAGRKAAELIDQKLDEVDKAPDMVNFDAAEPVIILGFGQMGQVLANFLSAPLASGGEGDVAGWPYVAFDLDPSVVKASRDLGFPILYGDGSRPAVLQSAGISSPKAVMVMYTGRSRTMEAVQRLRSAFPAIPIYARAQDLVHLLELKKAGATDAILEDAETSLQLGSKLLKGLGVMSDDVTFLSQLVRNSMELQAQEALDKTNEQDLDSMKPLQVRVGDLIGTRLPASVSSPEAKMLLVNQAADSHILRIQREVEGGSVIKLSPDDLEEGKGVLYCELDATDNNNNFSLNSGEKEDKHVVDQLMPCITTITEESS 818
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 8556218 8561336 + Conep12aG0104300.1 Cone12ag1015 449859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone12ag1015 818 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 42 784 - GO:0009507(PANTHER)|GO:0016020(PANTHER)
Cone12ag1015 818 Gene3D - 111 511 IPR038770 -
Cone12ag1015 818 Pfam TrkA-N domain 535 658 IPR003148 GO:0006813(InterPro)
Cone12ag1015 818 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 535 673 IPR036291 -
Cone12ag1015 818 FunFam K(+) efflux antiporter 3, chloroplastic 111 510 - -
Cone12ag1015 818 Gene3D - 534 705 - -
Cone12ag1015 818 FunFam Glutathione-regulated potassium-efflux system protein KefB 532 704 - -
Cone12ag1015 818 Pfam Sodium/hydrogen exchanger family 122 503 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Cone12ag1015 818 ProSiteProfiles RCK N-terminal domain profile. 534 666 IPR003148 GO:0006813(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0413 Cone-Chr11:2044628 Cone12ag1015 Cone-Chr12:8556218 7.04E-95 dispersed
Cone12ag1015 Cone-Chr12:8556218 Cone18ag1094 Cone-Chr18:8008730 8.84E-81 dispersed
Cone12ag1015 Cone-Chr12:8556218 Cone8ag1043 Cone-Chr8:9593958 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone12ag1015 K03455 - vvi:100259410 1079.7