Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone12ag1031 ATGTCTTCTTCCTCTTCTGAATTTCTTTCATCAGAGACACTACCCTTAAGACCCATACCGGGCGGTTACGGGATCCCGTACTTCGGCCCCGTAAAGGACCGTCTGGATTACTTCTACAACCAAGGTGAAACTGAGTTCTTCCGATCCAAGATCCGTAACTACAACTCCACCGTGTTTCGGACCAATGTCCCCCCGGGTCCATTCGTCGCTTCCAACTCCAAAGTTGTCGCCGTTCTAGATGCTGTCAGCTTCACTATCCTTTTTGACAACTCTAAGGTTGAGAAAAAAGACGTTCTGGTCGGAACTTTCATGCCATCTACTGACTTCACAGGGGGATACCGGGTTTGTGGATACCTCGACCCATCTGAACCGGACCACCATGTGCTCAAAGGGCTATTCCTTTCTTTTCTCATGGCTCGTCATTCTACATTCCTCCCTCTCTTTAGAAACGGTCTGTCCGACCTCTTTTTGGATATCGAAGACCAGATATCAGACAAAGGCGTAGCAGAATTCAACAGTTTGAACAGCAAAATGTCATTTGAATTCATGTTTCGTCTTTTGTGTGACAATCGTAGGCCATCCGATACGAAACTGGGATCGGATGGTCCGAAGCTGTTCGATAAATGGCTGCTTGTTCAGCTCGCACCGCTTTTTACACTAGGGTTTCCAAAGGTGTTCAAGTATGTAGAAGATTTCTTACTTCGTACATTACCATATCCATATATCTTAGTCAAACGTGATTACGAGAAGCTTTACGAGGCGTTCGACACGTCGGCAAAGTCGTTTCTGGACGAAGCAGCTCGTCTAGGGATCGAGAGAGAGAAAGCTTGTCACAACTTGATTTTCCTTGCTTCCGGACAAGCATACGTAGGGATGAAGCCTTTGTTTCCATCTTTGATCAAGTTTGTCGGGTTCGCAGGAGAAGGTTTACACAAGCAGCTAGCTGATGAGATCAGGACCGTCGTTAAATCCGAGGGTGGGGTCACTTTCAGTTCGTTGGACAAGATGAGTTTGACCAAGTCAGTGGTGTACGAGGTTCTACGACTCGAACCTCCGGCTAAGTATCAGTTCGGTAAGGCCAAGGAGGATATAGTGGTCCACAGCCACGATGCGACGTATCAGATAAAGAAAGGCGAGACGATCTATGGATTTCAGCCGTTGGCTACAAGAGATCCTAGGATTTTCGAGAATCCTGAGGATTTTGTGAGCCATAGGTTTGTAGGGGAGGATGGAGAGAAGTTGCTGAAGTATGTTTATTGGTCAAATGGAAGGGAGACTGATAATCCGACGGCGGATAATAAGCAGTGTCCAGGGAAGAATCTTGTGCCCTTGATGTGTAAGATTGTGTTGGTGGAGCTGTTCTTACGTTATGACACGTTTACGTTTGAGATGGGAACGTCGCTTGGTCAACCAATCGTGAAGATCAAGTCGTTGACCAAGGCCACTACTATATAG 1455 46.67 MSSSSSEFLSSETLPLRPIPGGYGIPYFGPVKDRLDYFYNQGETEFFRSKIRNYNSTVFRTNVPPGPFVASNSKVVAVLDAVSFTILFDNSKVEKKDVLVGTFMPSTDFTGGYRVCGYLDPSEPDHHVLKGLFLSFLMARHSTFLPLFRNGLSDLFLDIEDQISDKGVAEFNSLNSKMSFEFMFRLLCDNRRPSDTKLGSDGPKLFDKWLLVQLAPLFTLGFPKVFKYVEDFLLRTLPYPYILVKRDYEKLYEAFDTSAKSFLDEAARLGIEREKACHNLIFLASGQAYVGMKPLFPSLIKFVGFAGEGLHKQLADEIRTVVKSEGGVTFSSLDKMSLTKSVVYEVLRLEPPAKYQFGKAKEDIVVHSHDATYQIKKGETIYGFQPLATRDPRIFENPEDFVSHRFVGEDGEKLLKYVYWSNGRETDNPTADNKQCPGKNLVPLMCKIVLVELFLRYDTFTFEMGTSLGQPIVKIKSLTKATTI 484
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 8642341 8643795 + Conep12aG0106000.1 Cone12ag1031 449875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone12ag1031 484 Pfam Cytochrome P450 312 459 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone12ag1031 484 Gene3D Cytochrome P450 14 483 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone12ag1031 484 PANTHER CYTOCHROME P450 26 19 457 - GO:0016125(PANTHER)|GO:0016491(PANTHER)
Cone12ag1031 484 FunFam Allene oxide synthase, chloroplastic 14 483 - -
Cone12ag1031 484 PRINTS E-class P450 group IV signature 336 352 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone12ag1031 484 PRINTS E-class P450 group IV signature 373 387 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone12ag1031 484 PRINTS E-class P450 group IV signature 389 407 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone12ag1031 484 PRINTS E-class P450 group IV signature 436 454 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone12ag1031 484 CDD CYP74 48 476 - -
Cone12ag1031 484 SUPERFAMILY Cytochrome P450 14 461 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag1031 Cone-Chr12:8642341 Cone12ag1126 Cone-Chr12:9073403 1.63E-238 dispersed
Cone12ag1031 Cone-Chr12:8642341 Cone8ag1170 Cone-Chr8:10108017 1.12E-244 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone12ag1031 K01723 - vvi:100252012 619.387