Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone12ag1091 ATGGAGATTGTGATCAAAATTGTAGCATACGTATTCTTCTTCTTCTTTAGCTTCCTCTCATACCATTTTGTCAAGAAACAAAAGACAAAATCGAAACACGTACTAACTAATTATAAGCTCCCTCCTGGCTCAATGGGATTCCCATTCATTGGTCAAACCCTCCAACTCTACTCTCAAGACCCTAATTTCTTCTTCTCTTCCAAGCAAAAGAAATATGGAGAGATATTTAAAAGCCATATACTTGGCTGCCCATGTGTGATGGTAGCTAGTCCAGAGGCAGCACGGTTTGTGCTAGTCACTCACGCTCACTTGTTCAGGCCAACTTACCCTAAATGCAAAGAGACCTTGATTGGCCCCTCTGCAATCTTCTTCCACTATGGAAACTACCATTCTCACCTTAGAAAGCTCGTTCAGAACTCTCTATCACCGGACAGAATCCGGAAGCTGATTCCCGACATTGAGGCCGTCGCCGATTCCGCCCTTCACTGTTGTGCTTCGGCCGGTCAAGCAGTCAACACCTTTCTTGAAATGAAAAAGTTCTCTTTCGATGCGGGGATTCTAGCTATATTTGGCGAATTGGATGGTAATTGCAAGAAAAAGCTCAAGGAGAATTACTGCATACTGAATAAAGGCTACAATTCTTTCCCTACAAATATACCAGGAACCGCATATTCCAAGGCACTTTTGGCGAGGAAGAGGTTGAGTGAGATTCTGGGTGAGCTGATAAGCGAGAGGAAGGAGAAGAGATTAGCGGAGAAGGATTTGCTGGGTCATCTTCTGAACTCAAAGGATGAAAAGGGTCAGGCTTTGACTGATGACCAGATTGCTGATAACATAATCGGAGTATTGTTTGCTGCTCAGGACACGACGGCTAGTGTTATTACATGGCTTCTTAAGTACCTTAACGATGATCACAAGCTTTTCGAGGCTGTTAAGGCAGAGCATATGGCAATATATGAAGCAAATGATGGAGGGAAGAAGCACTTGACTTGGTCTCAGATTAAAAACATGCCTCTCACTTATAGAGTTGTATTAGAGAGCTTAAGGATGGCAAGCATTATTTCTTTCACTTTTAGGGAGGCAGTGATTGATGTTGAATACCAAGGGTACCTGATACCAAAGGGCTGGAAGGTGATGCCTTTATTCAGGAACATTCATCATAACTCAGATTTCTTCTCTGATCCTCATCATTTTGATCCTTCCAGATTTGAGGTTTCTCCGAAGCCCAATACATTTATGCCATTTGGCAATGGAGTTCATGCTTGTCCTGGTAATGAGCTGGCCAAGCTTGAGATTCTCATATTAATCCATCTCCTTGTTACCAAATTCAGGTGGGAGGTAAAGGGATATTATAGTGGGATCCAGTACGGCCCATTTCCAGTTCCTCAACATGGGCTTCCCGCCTCATTTTGGAAAGAGCCCAATACTACTTCCTCTTCTTAA 1443 43.1 MEIVIKIVAYVFFFFFSFLSYHFVKKQKTKSKHVLTNYKLPPGSMGFPFIGQTLQLYSQDPNFFFSSKQKKYGEIFKSHILGCPCVMVASPEAARFVLVTHAHLFRPTYPKCKETLIGPSAIFFHYGNYHSHLRKLVQNSLSPDRIRKLIPDIEAVADSALHCCASAGQAVNTFLEMKKFSFDAGILAIFGELDGNCKKKLKENYCILNKGYNSFPTNIPGTAYSKALLARKRLSEILGELISERKEKRLAEKDLLGHLLNSKDEKGQALTDDQIADNIIGVLFAAQDTTASVITWLLKYLNDDHKLFEAVKAEHMAIYEANDGGKKHLTWSQIKNMPLTYRVVLESLRMASIISFTFREAVIDVEYQGYLIPKGWKVMPLFRNIHHNSDFFSDPHHFDPSRFEVSPKPNTFMPFGNGVHACPGNELAKLEILILIHLLVTKFRWEVKGYYSGIQYGPFPVPQHGLPASFWKEPNTTSSS 480
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
12 8915820 8918484 + Conep12aG0112600.1 Cone12ag1091 449935
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone12ag1091 480 FunFam Abscisic acid 8 29 472 - -
Cone12ag1091 480 Pfam Cytochrome P450 41 447 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone12ag1091 480 PRINTS P450 superfamily signature 285 302 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone12ag1091 480 PRINTS P450 superfamily signature 422 433 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone12ag1091 480 PRINTS P450 superfamily signature 342 353 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone12ag1091 480 PRINTS P450 superfamily signature 413 422 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone12ag1091 480 PRINTS E-class P450 group IV signature 422 440 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone12ag1091 480 PRINTS E-class P450 group IV signature 276 302 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone12ag1091 480 PRINTS E-class P450 group IV signature 406 422 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone12ag1091 480 PRINTS E-class P450 group IV signature 337 353 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone12ag1091 480 PRINTS E-class P450 group IV signature 63 86 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone12ag1091 480 SUPERFAMILY Cytochrome P450 35 471 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone12ag1091 480 Gene3D Cytochrome P450 29 472 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone12ag1091 480 PANTHER CYTOCHROME P450 26 39 450 - GO:0004497(PANTHER)|GO:0010295(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)
Cone12ag1091 480 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 415 424 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cone12ag1091 480 CDD CYP90-like 69 467 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag1091 Cone-Chr12:8915820 Cone9ag0347 Cone-Chr9:1528409 2.04E-184 dispersed
Cone12ag1091 Cone-Chr12:8915820 Cone8ag1134 Cone-Chr8:9977254 7.04E-303 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone12ag1091 K09843 - vvi:100246968 713.375