Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone12ag1091 | ATGGAGATTGTGATCAAAATTGTAGCATACGTATTCTTCTTCTTCTTTAGCTTCCTCTCATACCATTTTGTCAAGAAACAAAAGACAAAATCGAAACACGTACTAACTAATTATAAGCTCCCTCCTGGCTCAATGGGATTCCCATTCATTGGTCAAACCCTCCAACTCTACTCTCAAGACCCTAATTTCTTCTTCTCTTCCAAGCAAAAGAAATATGGAGAGATATTTAAAAGCCATATACTTGGCTGCCCATGTGTGATGGTAGCTAGTCCAGAGGCAGCACGGTTTGTGCTAGTCACTCACGCTCACTTGTTCAGGCCAACTTACCCTAAATGCAAAGAGACCTTGATTGGCCCCTCTGCAATCTTCTTCCACTATGGAAACTACCATTCTCACCTTAGAAAGCTCGTTCAGAACTCTCTATCACCGGACAGAATCCGGAAGCTGATTCCCGACATTGAGGCCGTCGCCGATTCCGCCCTTCACTGTTGTGCTTCGGCCGGTCAAGCAGTCAACACCTTTCTTGAAATGAAAAAGTTCTCTTTCGATGCGGGGATTCTAGCTATATTTGGCGAATTGGATGGTAATTGCAAGAAAAAGCTCAAGGAGAATTACTGCATACTGAATAAAGGCTACAATTCTTTCCCTACAAATATACCAGGAACCGCATATTCCAAGGCACTTTTGGCGAGGAAGAGGTTGAGTGAGATTCTGGGTGAGCTGATAAGCGAGAGGAAGGAGAAGAGATTAGCGGAGAAGGATTTGCTGGGTCATCTTCTGAACTCAAAGGATGAAAAGGGTCAGGCTTTGACTGATGACCAGATTGCTGATAACATAATCGGAGTATTGTTTGCTGCTCAGGACACGACGGCTAGTGTTATTACATGGCTTCTTAAGTACCTTAACGATGATCACAAGCTTTTCGAGGCTGTTAAGGCAGAGCATATGGCAATATATGAAGCAAATGATGGAGGGAAGAAGCACTTGACTTGGTCTCAGATTAAAAACATGCCTCTCACTTATAGAGTTGTATTAGAGAGCTTAAGGATGGCAAGCATTATTTCTTTCACTTTTAGGGAGGCAGTGATTGATGTTGAATACCAAGGGTACCTGATACCAAAGGGCTGGAAGGTGATGCCTTTATTCAGGAACATTCATCATAACTCAGATTTCTTCTCTGATCCTCATCATTTTGATCCTTCCAGATTTGAGGTTTCTCCGAAGCCCAATACATTTATGCCATTTGGCAATGGAGTTCATGCTTGTCCTGGTAATGAGCTGGCCAAGCTTGAGATTCTCATATTAATCCATCTCCTTGTTACCAAATTCAGGTGGGAGGTAAAGGGATATTATAGTGGGATCCAGTACGGCCCATTTCCAGTTCCTCAACATGGGCTTCCCGCCTCATTTTGGAAAGAGCCCAATACTACTTCCTCTTCTTAA | 1443 | 43.1 | MEIVIKIVAYVFFFFFSFLSYHFVKKQKTKSKHVLTNYKLPPGSMGFPFIGQTLQLYSQDPNFFFSSKQKKYGEIFKSHILGCPCVMVASPEAARFVLVTHAHLFRPTYPKCKETLIGPSAIFFHYGNYHSHLRKLVQNSLSPDRIRKLIPDIEAVADSALHCCASAGQAVNTFLEMKKFSFDAGILAIFGELDGNCKKKLKENYCILNKGYNSFPTNIPGTAYSKALLARKRLSEILGELISERKEKRLAEKDLLGHLLNSKDEKGQALTDDQIADNIIGVLFAAQDTTASVITWLLKYLNDDHKLFEAVKAEHMAIYEANDGGKKHLTWSQIKNMPLTYRVVLESLRMASIISFTFREAVIDVEYQGYLIPKGWKVMPLFRNIHHNSDFFSDPHHFDPSRFEVSPKPNTFMPFGNGVHACPGNELAKLEILILIHLLVTKFRWEVKGYYSGIQYGPFPVPQHGLPASFWKEPNTTSSS | 480 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 12 | 8915820 | 8918484 | + | Conep12aG0112600.1 | Cone12ag1091 | 449935 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone12ag1091 | 480 | FunFam | Abscisic acid 8 | 29 | 472 | - | - | |
| Cone12ag1091 | 480 | Pfam | Cytochrome P450 | 41 | 447 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag1091 | 480 | PRINTS | P450 superfamily signature | 285 | 302 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag1091 | 480 | PRINTS | P450 superfamily signature | 422 | 433 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag1091 | 480 | PRINTS | P450 superfamily signature | 342 | 353 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag1091 | 480 | PRINTS | P450 superfamily signature | 413 | 422 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag1091 | 480 | PRINTS | E-class P450 group IV signature | 422 | 440 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag1091 | 480 | PRINTS | E-class P450 group IV signature | 276 | 302 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag1091 | 480 | PRINTS | E-class P450 group IV signature | 406 | 422 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag1091 | 480 | PRINTS | E-class P450 group IV signature | 337 | 353 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag1091 | 480 | PRINTS | E-class P450 group IV signature | 63 | 86 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag1091 | 480 | SUPERFAMILY | Cytochrome P450 | 35 | 471 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag1091 | 480 | Gene3D | Cytochrome P450 | 29 | 472 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag1091 | 480 | PANTHER | CYTOCHROME P450 26 | 39 | 450 | - | GO:0004497(PANTHER)|GO:0010295(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER) | |
| Cone12ag1091 | 480 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 415 | 424 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone12ag1091 | 480 | CDD | CYP90-like | 69 | 467 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone12ag1091 | Cone-Chr12:8915820 | Cone9ag0347 | Cone-Chr9:1528409 | 2.04E-184 | dispersed | |
| Cone12ag1091 | Cone-Chr12:8915820 | Cone8ag1134 | Cone-Chr8:9977254 | 7.04E-303 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone12ag1091 | K09843 | - | vvi:100246968 | 713.375 |