Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone12ag1121 | ATGCCGCGTTCTCATTTCTACAAACTCATTCTGTCGTCAACTCTCCGGGCCAAACAATTGAGAATTCCAGAAAACTTCCTCAGGAAAATCAGGGATGAGCTCTCTACAGTTGCTACACTTTTAGTTCCTGATGGTCATGTTTGGCGTATAGGATTGAAGAAAGCTGATAACAAGTTTTGGCTTCAAGATGGTTGGCAGGAATTTATTGACCATTACTCCATCCGTGTGGGGTATTTCTTACTGTTCAGATACGAAGGGAAATCAAATTTCAATGTTTACATTTATAACTTGAAAACGTCTGAAATAGACTATCAATCCACTACTCTTGGAGGGACTCAGAGGACCACCTATGCGAATCAAAGTGCTATATTCGAAGAGTTAGAAGATGATGACTCGGCTTCTGACTCTTTAAAAGACACGGTTTTTCAAGAAGTTGTAGATAAACAGAAATCCTCCAAAGTTTCTATTCCTTTTTCACAAAATTTATTCAATGGATCTTCTACAAATAAGAAGAGCATGAATTGGACTGATGAAGAGGACCCTGATTCACCAAAGCATGCTGATAATTCACAAACTGAACTTCAGCCTAAAAGAAGGGGTAGAAAAAAGCAGAAAACTGATTCTAATGAGCATGGTCCATCCACCAAAAAAGAAGGGCAAGTAACAATGCGCATTAGATTTTATGAGAGTGCTTCTATCAGGAAGAGACCAGTGACCACAGAAGAAAGAGATAGTGCCATTAATTCAGCCAAAGCTTTTAATCCCATTAATCCTTTCTGCAGGGTTGTCTTACGGCCTTCCTATCTGTACAAAGGCTGTATAATGTATCTTCCATCCTGCTTTGCAGAGAAGAGTTTATGTGGGGTTTCTGGATTCATCAAGCTTCAGATTTGGGACGGAAGACAGTGGCCTGTTAGATGCTTGTATAGAGGAGGTAGAGCCAAGTTAAGCCAGGGATGGTACGAATTCTCATCAGAGAATAATTTGGAAGAAGGAGATGTTTGTGTCTTTGAGCTGATCAAGGGAAAAGAAATTACTCTAAAAGTGACCATTTTCCGGGTTGTTGAAGATGTTAAACTCATGACCCCACCACCTACAACGTGGCCGAAAAGCTTGAGCAGAGTAAACTAG | 1131 | 40.23 | MPRSHFYKLILSSTLRAKQLRIPENFLRKIRDELSTVATLLVPDGHVWRIGLKKADNKFWLQDGWQEFIDHYSIRVGYFLLFRYEGKSNFNVYIYNLKTSEIDYQSTTLGGTQRTTYANQSAIFEELEDDDSASDSLKDTVFQEVVDKQKSSKVSIPFSQNLFNGSSTNKKSMNWTDEEDPDSPKHADNSQTELQPKRRGRKKQKTDSNEHGPSTKKEGQVTMRIRFYESASIRKRPVTTEERDSAINSAKAFNPINPFCRVVLRPSYLYKGCIMYLPSCFAEKSLCGVSGFIKLQIWDGRQWPVRCLYRGGRAKLSQGWYEFSSENNLEEGDVCVFELIKGKEITLKVTIFRVVEDVKLMTPPPTTWPKSLSRVN | 376 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 9050836 | 9053503 | + | Conep12aG0115700.1 | Cone12ag1121 | 449965 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone12ag1121 | 376 | ProSiteProfiles | B3 DNA-binding domain profile. | 5 | 98 | IPR003340 | GO:0003677(InterPro) | |
Cone12ag1121 | 376 | Gene3D | - | 1 | 98 | IPR015300 | - | |
Cone12ag1121 | 376 | MobiDBLite | consensus disorder prediction | 173 | 197 | - | - | |
Cone12ag1121 | 376 | MobiDBLite | consensus disorder prediction | 165 | 221 | - | - | |
Cone12ag1121 | 376 | PANTHER | B3 DOMAIN-CONTAINING | 4 | 343 | IPR050655 | - | |
Cone12ag1121 | 376 | ProSiteProfiles | B3 DNA-binding domain profile. | 260 | 355 | IPR003340 | GO:0003677(InterPro) | |
Cone12ag1121 | 376 | Pfam | B3 DNA binding domain | 262 | 354 | IPR003340 | GO:0003677(InterPro) | |
Cone12ag1121 | 376 | Pfam | B3 DNA binding domain | 10 | 95 | IPR003340 | GO:0003677(InterPro) | |
Cone12ag1121 | 376 | SUPERFAMILY | DNA-binding pseudobarrel domain | 3 | 97 | IPR015300 | - | |
Cone12ag1121 | 376 | SUPERFAMILY | DNA-binding pseudobarrel domain | 253 | 353 | IPR015300 | - | |
Cone12ag1121 | 376 | CDD | B3_DNA | 5 | 96 | IPR003340 | GO:0003677(InterPro) | |
Cone12ag1121 | 376 | SMART | B3_2 | 260 | 355 | IPR003340 | GO:0003677(InterPro) | |
Cone12ag1121 | 376 | SMART | B3_2 | 6 | 98 | IPR003340 | GO:0003677(InterPro) | |
Cone12ag1121 | 376 | CDD | B3_DNA | 258 | 353 | IPR003340 | GO:0003677(InterPro) | |
Cone12ag1121 | 376 | Gene3D | - | 237 | 358 | IPR015300 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone12ag1121 | Cone-Chr12:9050836 | Cone3ag1122 | Cone-Chr3:29806884 | 1.08E-54 | dispersed | |
Cone10ag1130 | Cone-Chr10:8141996 | Cone12ag1121 | Cone-Chr12:9050836 | 3.69E-135 | wgd | |
Cone12ag1121 | Cone-Chr12:9050836 | Cone3ag1121 | Cone-Chr3:29791630 | 1.06E-129 | wgd | |
Cone12ag1121 | Cone-Chr12:9050836 | Cone8ag1166 | Cone-Chr8:10086216 | 5.46E-249 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
44503 | None | None | None | None | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone12ag1121 | - | - | - | 0.0 |