Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone12ag1126 ATGTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCCTCTTCCGAACTACCTTTAAAGGCCATTCCCGGCGATTATGGGCTTCCTTTATTCGGCCCAATCAGAGACCGTCTCGACTACTTTTACAACCAAGGCGAGGATGAGTTCTTCCGTTCACGAATCCGCCACCACAGCTCCACCGTCTTCCGAACCAACATGCCGCCAGGTCCGTTCATATCATCTAATCCAAAAGTCATAGCCGTCCTCGACGCCGTTAGCTTCGCAGTTCTCTTAGACAACTCCAAGATCGAGAAACGAGACGTCCTTGACGGAACTTTCATGCCGTCGACCTCCTTCACCGGGAACTACCGCGCATGTGCATTTCTAGACCCGTCCGAACCAGACCACAAAGATCTCAAAAGCTTCTTCCTCTCTATTCTCGCCTCTAACCACCACACTTTCCTCCCTCTCTTCCGTACCTCCTTATCCGAGCTCTTCAGCGAGCTAGAAGATCAAGTGTCGGATACGAAACGCCAAGCAAATTTCAACACAATCAGTGACAGTATGGCCTTCGCATTCGTTTTCCGGATCATCTGCGGCCAAAAGCTGTCAGACCCAAAGTTGCAGTCAGAAGCTCCGAAAATGATCGACAAATGGCTCATATGCCAGCTCGCTCCGCTCGGAACCCTAGGTTTACCGAAGATATTCAAAATCCTAGACGACTTGTCGTTGCGCACGATCAAGTTTCCATTCCTTCTGGTTAAAAAAGATTACGAGAAGCTCTACGACATGTTCTACTCGTCGGCGAGCTCTGTTCTGGACGAAGCAGAGAGTAAGTTCAAAATCCAGCGAGAAAAAGCGTGCCATAATTTGGTCTTTCTCGCCGGTTTTAATGCATATGGCGGGATGAAAATTATGTTTCCCTCCCTAATCAAGTGGGTTGGATCAACAGGCGATACTTTACACCGTCAGCTGGCCGATGAGATCAGGACCGTTTTTAAAGCGGAAGGCGGACTCACTCTACGTGCGCTGGATAAGCTAACTTTGACTAAATCCGTAGTGTACGAGTTTCTAAGAATTGACCCACCGGTTCCGTACCAGTACGGGAAGGCGAAGAAGGATATGGTGGTCAAGAGTCATGACGCGGCGTACGAGATCAAGAAGGGCGAGATGATCTTTGGATATCAGCCGTTCGCTACGAAGGATCCGAAGGTTTTCGAGAACCCTGATGATTTTGTGGGCCATAGGTTTGTAGGGGAGGAGGGAGAAAAGCTGTTGAAGTACGTTTATTGGTCGAATGGACGAGAGACGGATGATCCGACGGCGGAGAATAAACAGTGTCCGGGGAAGAATCTGGTGGTGCTTCTATGTAGAGTTATGTTGGCGGAGTTTTTCCTCCGTTACGATACGTTTACGTTCGAGACGAAGAAGACGCTGGGATCGGCGGCGGTGACAGTGATCTTCAAGTCATTGACCAAGGCGACTAGCTAG 1467 49.15 MSSSSSSSSSSSSSELPLKAIPGDYGLPLFGPIRDRLDYFYNQGEDEFFRSRIRHHSSTVFRTNMPPGPFISSNPKVIAVLDAVSFAVLLDNSKIEKRDVLDGTFMPSTSFTGNYRACAFLDPSEPDHKDLKSFFLSILASNHHTFLPLFRTSLSELFSELEDQVSDTKRQANFNTISDSMAFAFVFRIICGQKLSDPKLQSEAPKMIDKWLICQLAPLGTLGLPKIFKILDDLSLRTIKFPFLLVKKDYEKLYDMFYSSASSVLDEAESKFKIQREKACHNLVFLAGFNAYGGMKIMFPSLIKWVGSTGDTLHRQLADEIRTVFKAEGGLTLRALDKLTLTKSVVYEFLRIDPPVPYQYGKAKKDMVVKSHDAAYEIKKGEMIFGYQPFATKDPKVFENPDDFVGHRFVGEEGEKLLKYVYWSNGRETDDPTAENKQCPGKNLVVLLCRVMLAEFFLRYDTFTFETKKTLGSAAVTVIFKSLTKATS 488
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 9073403 9074869 + Conep12aG0116200.1 Cone12ag1126 449970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone12ag1126 488 FunFam Allene oxide synthase, chloroplastic 16 488 - -
Cone12ag1126 488 SUPERFAMILY Cytochrome P450 17 465 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone12ag1126 488 PANTHER CYTOCHROME P450 26 21 460 - GO:0016125(PANTHER)|GO:0016491(PANTHER)
Cone12ag1126 488 CDD CYP74 50 478 - -
Cone12ag1126 488 Gene3D Cytochrome P450 16 484 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone12ag1126 488 PRINTS E-class P450 group IV signature 439 457 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone12ag1126 488 PRINTS E-class P450 group IV signature 376 390 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone12ag1126 488 PRINTS E-class P450 group IV signature 339 355 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone12ag1126 488 PRINTS E-class P450 group IV signature 392 410 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone12ag1126 488 Pfam Cytochrome P450 114 461 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag1031 Cone-Chr12:8642341 Cone12ag1126 Cone-Chr12:9073403 1.63E-238 dispersed
Cone12ag1126 Cone-Chr12:9073403 Cone3ag1324 Cone-Chr3:32186773 5.08E-121 dispersed
Cone12ag1126 Cone-Chr12:9073403 Cone17ag1313 Cone-Chr17:9317475 2.19E-181 wgd
Cone12ag1126 Cone-Chr12:9073403 Cone20ag0160 Cone-Chr20:698999 5.24E-183 wgd
Cone12ag1126 Cone-Chr12:9073403 Cone4ag1880 Cone-Chr4:13437908 6.77E-182 wgd
Cone12ag1126 Cone-Chr12:9073403 Cone7ag1789 Cone-Chr7:11734720 4.15E-178 wgd
Cone12ag1126 Cone-Chr12:9073403 Cone8ag1170 Cone-Chr8:10108017 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone12ag1126 K01723 - cit:102614058 658.677