Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone12ag1227 ATGGCCCCTTTTTTCTCTTATTTTCTTTCCATCTTCTTCCTCTTACCACTAAGTCTGGCCCTTTCAACGGATCAGACCTTCATTTTCCGAGTTGACAGCCACTCGAAGCCGTCCATTTTCCCCTCTCATTACCACTGGTACTCTTCCGAATTCGCTGACCCTCTGCGGATCCTTCACGTATACGACACCGTCTTCCATGGCTTCTCTGCGACTCTCAACCCGGATCAAGTGGCCTCCATCCGACAACACCCTTCCGTCCTCGCCGTTTTCGAAGACCGCCGCCGTCAGCTCCACACCACGCGCTCCCCTCAGTTCCTCGGACTCCAGACCCAGCACGGACTCTGGTCCAAATCAGACTACGGCTCCGACGTAATAATCGGAGTGTTCGACACAGGAATCTGGCCGGAGCGACGGAGCTTCAGCGACTCACACCTAGGTCCAGTGCCGGAAAAGTGGAAAGGAGTTTGTCAAACCGGAGTGAAATTCACATCCCGTAGCTGTACCCGCAAAATCGTCGGAGCCAGATTCTTCTCCAAAGGTCACGATGCTTCAGCCAGTGTAGGCGGTCCTGTAATCGGAGCCAACGATACAGTGGAATACCGGTCACCTAGAGACGCAGACGGGCATGGGACCCACACCGCATCAACGGCAGCGGGAAGGTATGCATTCCAGGCAAGCATGGAAGGCTACGCAGCCGGAATAGCGAAAGGAGTCGCTCCAAAAGCTCGTTTGGCGGTTTACAAAGTCTGCTGGAAGAATTCAGGCTGTTTCGATTCGGATATTCTCGCCGCATTTGATGCGGCAGTCAATGACGGTGTTGACGTCATATCAATCTCGATTGGCGGTGGGGACGGTATCTCATCACCCTACTATCTCGACCCTATTGCGATAGGAGCATACGGCGCCGCTTCGAGAGGAGTGTTTATCTCATCCTCAGCTGGAAACGACGGACCTAGTGGGATGTCTGTTACCAATGTAGCGCCGTGGATCACGACGGTCGGAGCGGGGACGATCGACCGGAACTTCCCGGCGGTTGTTATTCTCGGAAATGGAAGGAAGCTCTCCGGCGTTTCGTTGTACGCTGGAGCACCGTTGGGTGGGAAAATGTATCCTCTGGTTTATCCTGGAAAATCAGGGATTCTCTCTGCTTCACTGTGTATGGAAAATTCGCTTGATCCGAATCTGGTTCGAGGTAAGATCGTGATCTGCGATCGTGGAAGTAGTGCAAGAGTGTCTAAAGGTTTGGTTGTTAAGCAAGCTGGAGGAGTAGGAATGATTCTCGCAAACGGAATTTCAACCGGAGAAGGACTGGTGGGAGACGCTCACCTCCTTCCTGCCTGTGCCGTCGGCTCCGATGAAGGCGATGCCGCCAAGGCTTACATCACATCCTCTGCATATCCGACGGCCACAATTGAATTCGACGGCACCGTGATCGGAATCAAGCCTGCACCAATCGTCGCTTCGTTTTCCGGACGAGGACCAAACGGTTTGAACCCCGAAATTCTCAAACCGGACTTGATCGCTCCAGGTGTGAACATCCTCGCCGCTTGGACCGATGCTGTGGGACCTACTGGCTTACAGTCCGATACACGAAAAACAGAGTTCAGTATTCTGTCTGGGACATCCATGGCGTGTCCTCACGTCAGTGGAGCAGCAGCTTTACTGAAATCTGCTCATCCGGATTGGAGTCCGGCTGCATTGAGATCCGCGTTGATGACATCGGCGACCGTAATTGACAACCGACGGCAGCCGATGACCGAGGAGTCCTCTGGGAAAGCTTCTACGCCGTACGATTTCGGAGCTGGTCATGTCAGCTTGGATCGAGCAATGGACCCTGGACTTGTTTACGACATTTCGAATAATGATTACATCAACTTCTTATGCGCCATCGGATACGGGCCAAAGGTAATTCAGGTGATTACTCGAACTCCAGTGGTTTGTCCCACAAAGAAGCTGTTGCCTGAGAATTTGAACTATCCGTCCATAGTTGCTCTCTTCTCGAGCTCATCAAGTGGGGTTTCGACCAAGTCGTTTATTAGAACTGTGACTAATGTTGGTCCCTCGAACTCGGTTTATTGGGTGAAAGTCGATGCGCCTAAAGGAGTGACGGTTAATGTGAAGCCAGCAAAGCTAGTGTTTGCAGGTAAGGTAAGGAAGCAGAGCTTTGTAGTTACAGTGACGGGAGAAAGCCGGAACCTGGCTTTGGATGAATCGGGTACCAGGTTCGGGTCGATTTCTTGGGAGGATGGCAAACACATGGTTAGAAGCCCCATTGTGATCACTCTACTAGATCCCTTATAA 2301 52.15 MAPFFSYFLSIFFLLPLSLALSTDQTFIFRVDSHSKPSIFPSHYHWYSSEFADPLRILHVYDTVFHGFSATLNPDQVASIRQHPSVLAVFEDRRRQLHTTRSPQFLGLQTQHGLWSKSDYGSDVIIGVFDTGIWPERRSFSDSHLGPVPEKWKGVCQTGVKFTSRSCTRKIVGARFFSKGHDASASVGGPVIGANDTVEYRSPRDADGHGTHTASTAAGRYAFQASMEGYAAGIAKGVAPKARLAVYKVCWKNSGCFDSDILAAFDAAVNDGVDVISISIGGGDGISSPYYLDPIAIGAYGAASRGVFISSSAGNDGPSGMSVTNVAPWITTVGAGTIDRNFPAVVILGNGRKLSGVSLYAGAPLGGKMYPLVYPGKSGILSASLCMENSLDPNLVRGKIVICDRGSSARVSKGLVVKQAGGVGMILANGISTGEGLVGDAHLLPACAVGSDEGDAAKAYITSSAYPTATIEFDGTVIGIKPAPIVASFSGRGPNGLNPEILKPDLIAPGVNILAAWTDAVGPTGLQSDTRKTEFSILSGTSMACPHVSGAAALLKSAHPDWSPAALRSALMTSATVIDNRRQPMTEESSGKASTPYDFGAGHVSLDRAMDPGLVYDISNNDYINFLCAIGYGPKVIQVITRTPVVCPTKKLLPENLNYPSIVALFSSSSSGVSTKSFIRTVTNVGPSNSVYWVKVDAPKGVTVNVKPAKLVFAGKVRKQSFVVTVTGESRNLALDESGTRFGSISWEDGKHMVRSPIVITLLDPL 766
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 9526803 9529415 + Conep12aG0126700.1 Cone12ag1227 450071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone12ag1227 766 Gene3D - 339 478 - -
Cone12ag1227 766 FunFam Subtilisin-like protease SBT1.5 123 352 - -
Cone12ag1227 766 FunFam Subtilisin-like protease SBT1.5 627 763 - -
Cone12ag1227 766 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 50 759 IPR045051 -
Cone12ag1227 766 CDD PA_subtilisin_like 345 471 - -
Cone12ag1227 766 SUPERFAMILY Protease propeptides/inhibitors 27 95 - -
Cone12ag1227 766 Pfam Subtilase family 121 601 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cone12ag1227 766 Pfam PA domain 370 456 IPR003137 -
Cone12ag1227 766 ProSitePatterns Serine proteases, subtilase family, serine active site. 540 550 IPR023828 -
Cone12ag1227 766 CDD Peptidases_S8_3 96 576 IPR034197 -
Cone12ag1227 766 ProSiteProfiles Serine proteases, subtilase domain profile. 105 610 - -
Cone12ag1227 766 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 98 IPR037045 -
Cone12ag1227 766 FunFam subtilisin-like protease SBT1.5 339 478 - -
Cone12ag1227 766 Gene3D Peptidase S8/S53 domain 123 623 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cone12ag1227 766 PRINTS Subtilisin serine protease family (S8) signature 121 140 IPR015500 -
Cone12ag1227 766 PRINTS Subtilisin serine protease family (S8) signature 205 218 IPR015500 -
Cone12ag1227 766 PRINTS Subtilisin serine protease family (S8) signature 539 555 IPR015500 -
Cone12ag1227 766 SUPERFAMILY Subtilisin-like 97 614 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cone12ag1227 766 Pfam Peptidase inhibitor I9 27 98 IPR010259 -
Cone12ag1227 766 Pfam Fibronectin type-III domain 656 760 IPR041469 -
Cone12ag1227 766 Gene3D - 627 763 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag1227 Cone-Chr12:9526803 Cone17ag0039 Cone-Chr17:246918 1.61E-295 dispersed
Cone12ag1227 Cone-Chr12:9526803 Cone4ag1998 Cone-Chr4:13960673 5.05E-140 wgd
Cone12ag1227 Cone-Chr12:9526803 Cone8ag1278 Cone-Chr8:10541907 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone12ag1227 - - - 0.0