Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone12ag1295 | ATGGCTTCTGGGACAGATTACCCGCCTCTATTATTCATCTTTGAAGCCAATTACCGAAAGAGAAATGTCATACTGGCTAGAAATGAAAAGGGGGAGTCTCTTGAGAACACAAGACACATACACATTAGCAAACCTTCAAGGCAACTCTCAACAGTTTCACACTACGTTAGCCCGGTTCAGTTGAATTCTGCAATTGAATCAGAATTTGATATTGAGATGGTTACCGCAAAACCATCATCAGACTGTGACTCGACATTTGAACCCGTTTTCCGATCGGGGAGTTGTTCTGAAATTGGGCCGAAGCCTTTTATGGAGGATGAGCATGTATGTATCGATGATCTTCTTGAGCATCTGGGTCCCACTGAACACTTCTATTCTCCTGGCGCTTTCTATGGGGTATTTGATGGGCATGGTGGTGTAGATGCAGCTTCCTTTATTAGGCATAACATTTTGAGGTTTATAATCAAAGACACCCATTTCTCTGACTGCATGAATGAGGCTATTAAAAGTGCTTTTCTGAAAGCCGATCAAGCATTTGAAGAAGTTGCTTCTCTAGATACTTCCTCTGGTACTACTGCACTAACCGCTCTTATTTGTGGAAGGAGAATGCTAATTGCCAATGTGGGGGATTGTAGAGCCGTGTTGGGGAAAAGAGGGAAGGCGACGGAGTTATCAAAGGACCACAAGCCAAACTGCAGTTCTGAAAGGCGAAGGATTGAGAGACTAGGTGGTGTGGTATATGACGGTTACCTTAACGGGCGGTTATCAGTTTCACGGGCCCTCGGAGATTGGCATATGAAAGGCCCAAAAGGTTCCTCCCTCAGTTCTTGTCCGTTAAGCGCTGAGCCTGAGGTCCAAGAGGTAGTGCTTGGCCCGGAAGATGAGTTCTTGATATTAGGTTGTGATGGGTTGTGGGATGTTATGAGCAGCCAGTTTGCAGTTATGATTGCTAGGAAGGAGTTGATGATTCATAACGATCCAGAGAGATGTGCTAGGGAGCTTGTTAGGGAGGCTATGAAGAGGAATTCATGCGATAATTTGACGGTTATTGTCATCTGTTTTTCTCCAGATCCTCCACCTCAGATTAGACAGTGA | 1095 | 44.84 | MASGTDYPPLLFIFEANYRKRNVILARNEKGESLENTRHIHISKPSRQLSTVSHYVSPVQLNSAIESEFDIEMVTAKPSSDCDSTFEPVFRSGSCSEIGPKPFMEDEHVCIDDLLEHLGPTEHFYSPGAFYGVFDGHGGVDAASFIRHNILRFIIKDTHFSDCMNEAIKSAFLKADQAFEEVASLDTSSGTTALTALICGRRMLIANVGDCRAVLGKRGKATELSKDHKPNCSSERRRIERLGGVVYDGYLNGRLSVSRALGDWHMKGPKGSSLSSCPLSAEPEVQEVVLGPEDEFLILGCDGLWDVMSSQFAVMIARKELMIHNDPERCARELVREAMKRNSCDNLTVIVICFSPDPPPQIRQ | 364 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 9857607 | 9860330 | + | Conep12aG0133600.1 | Cone12ag1295 | 450139 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone12ag1295 | 364 | SUPERFAMILY | PP2C-like | 85 | 355 | IPR036457 | - | |
Cone12ag1295 | 364 | ProSitePatterns | PPM-type phosphatase domain signature. | 130 | 138 | IPR000222 | GO:0043169(InterPro) | |
Cone12ag1295 | 364 | Gene3D | - | 72 | 357 | IPR036457 | - | |
Cone12ag1295 | 364 | SMART | PP2C_4 | 81 | 352 | IPR001932 | - | |
Cone12ag1295 | 364 | CDD | PP2Cc | 90 | 354 | IPR001932 | - | |
Cone12ag1295 | 364 | PANTHER | PROTEIN PHOSPHATASE 2C | 78 | 354 | IPR015655 | GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0006470(PANTHER) | |
Cone12ag1295 | 364 | ProSiteProfiles | PPM-type phosphatase domain profile. | 91 | 354 | IPR001932 | - | |
Cone12ag1295 | 364 | SMART | PP2C_SIG_2 | 106 | 354 | IPR001932 | - | |
Cone12ag1295 | 364 | FunFam | Probable protein phosphatase 2C 22 | 75 | 357 | - | - | |
Cone12ag1295 | 364 | Pfam | Protein phosphatase 2C | 98 | 346 | IPR001932 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone12ag1295 | Cone-Chr12:9857607 | Cone7ag1942 | Cone-Chr7:12392172 | 4.28E-153 | dispersed | |
Cone14ag0002 | Cone-Chr14:28189 | Cone12ag1295 | Cone-Chr12:9857607 | 2.69E-31 | transposed | |
Cone12ag1295 | Cone-Chr12:9857607 | Cone8ag1336 | Cone-Chr8:10770928 | 1.62E-253 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone12ag1295 | K14803 | - | mdm:103422184 | 525.398 |