Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone12ag1403 ATGGAATTGAGAAGAGCCCGTTTTGTTGCTTTCTTCTTCGTCATTCTAATCTGCCAGTTGTCTACATCAAGTTCAGGAAGGAAGAGAAGAAAATCAGCGACGGTTTTCGACAACTGTGGTGGCAGAGGTTTGGCAGAGCAGACGAGAACTCGTTGCAGGAAAGAGTTGACACTCAGAGAAGATAATGTCAAAATGTATGATTCAAATACCCCACAAAACACACTTGATGGCATCAACTTATTATCCTTAGTTCAAAAGCAAACACTTCTACATTGCTTGAGAAAGAGAAACCTTACATTTTGTGGTTCTAGCGAAGATGATAACCGTAACTGTCAGTTCAGTATCTGTCTCCAGTCCATTCTTCATGGGTCACATTTTCATAGAAGAAGAAACCTAGTTAGTAATTCACAAGGCCCAACACCAGCCGCAGCTCAGTCTCCAGTTCAAACCCCTAAACATCGTCAACCCACAAAAAGGCCTCCTCAACATCTTCCACATTTACATGCTAAAATGCTGCGTTCCCTAGCAGAGAAGCCCGACAACAATAAAAAGATAATTGCTGCAACTCTTGCGGTTTTGATTTTTGTCTTTGCATTGCTTATATTTTGCTGTCTTAAGAGGAGGGGAAACAGAATCAGCCTGAAAGATTCAAAGAGAGATGAGAGTCCTCTTCTCAACTTATCCTCGAATGATTTATCAGCAGGTTCTTCAGAGAAGTCATTTAGTATAGGACATGCAAACACAAAGAATTTCATGCTCAATAGTGTAAATAATACTAACCCATTAAGTAGAAATCTGTCCTTTAAGGCTCAAAACAATCACTTGCCAGGTGAAGCTCCATCATCCAATGGAGCATCACCTTGTCTGCCTCTAAAACCTCCCCCTGGAAGATCAGCTCATCCTCCTCCACCTCCCACACAACCACCACCTCAGCCGCCGCCGCCGCCTCCACCACCACCTCGTCCTCCGCCGCCATTAAAACCTGCTCCTTCAAAACTGATGCATGGTAAGACTAAAGCCGCACCACCACTCCCACCTCGTCGAGGTCTATGTGGTTCTAATGATGTCAGCGATTCGGATGGGGAGTCATATAATAAGGCCAAGTTAAAGCCTTTCTTTTGGGATAAGGTCCTCGCAAGTTCCGATCATTCCATGGTTTGGCATGAGATCAGTTCCGGGTCATTCCAGTTCAATGAGGAAACGATGGAGTCTCTATTTGGTTATGTTCCGGTGAATAAGAACAAAGGTGAGGGAAGTAGAACTTCATCATCCTCAGAATTAGGAGTCCAGTATATTAAGATTATTGATGGAAAGAAAGCACAAAACCTATCAATTCTTCTACGTGCCCTAAATGTTACAATAGAAGAAGTTGTTGATGCCCTACAAGAAGGTAATGAGCTTCCAATGGAGCTCCTGCAAACCTTGTTGAAGATGGCACCAACCGCAGATGAGGAACTAAAGCTTAGATTATTCATCGGCGACCTTAACCAACTAGGCCCTGCAGAACGGTTCCTCAAGGTCTTGGTTGACATCCCGTTTTCTTTTAAGCGACTAGAGACACTGCTCTTCATGTTCACACTCCAAGAAGAACTTCCTGTAATTAAGGACAGCTTTGCAACCTTAGAGGCTCCATGTCGAAAATGGCAGGTTGCTTGTAAAGTGCTCAGAAACAGCAGGCTATTCTTGAAACTGTTAGAAGCTGTTTTGAAAACCGGAAACCGTATGAATGACGGAACATTCCGAGGGGGTGCTCAGGCATTTAAGCTTGACACGCTCTTGAAACTCTCCGACGTTAAAGGGACTGATGGAAAAACCACCCTCTTACTCTACATCGTTCAAGAGATAATCCGATCAGAGGGTGTACGAGCTGTCCGTATGTTGCGAAAAAGTGGGCCTCTGACCAGCGAGAGTTCCAATGATGTATCTGTCGAACACTATCGCCAGCTAGGACTTGAAGTGGTCTCTGGTTTAAGCACGGAACTTGAAGATGTCAAAAAGGCAGCTGCCATTGATGGTGATGGAATAACAGCTATGGTTAGTAAGCTTGGGAAATGGTTGGTAAAGACCCGAGATTTTATGAATTCTGAGATAAATAACCTTGATGAAGAAAGTGGATTTCAGCATTCGGTTTCGGGTTTTTTGGAGCAAGCTGAGGGTGACATAATGTGGCTAATGGAAGAGGAGAAGAAGATGATGTCTTTGGTTAAGAGCACATCGGATTATTTCCATGGAGATTCGGCGAAAGACGAAGGATTGAGATTGTTCGTGATCGTCCGAGATTTCTTGGTTATGTTGGATAAAGCATGTAAAGAAGTTAGAAGTTTGGCTATGAAGCCGGTGAAAGTGAATACTGGTAGAAAAGAGACTCCAAAGAGTTCATCTGCTTCTTCAGAAAATCGTCATACGGCTTCCCAGGTTGTTAGACAAAGATTGTTTCCGGCAATTACAGAACGTAGAACATATGATGATTTCAGCTCAGATGAGGGAAGTCCTTAG 2496 43.51 MELRRARFVAFFFVILICQLSTSSSGRKRRKSATVFDNCGGRGLAEQTRTRCRKELTLREDNVKMYDSNTPQNTLDGINLLSLVQKQTLLHCLRKRNLTFCGSSEDDNRNCQFSICLQSILHGSHFHRRRNLVSNSQGPTPAAAQSPVQTPKHRQPTKRPPQHLPHLHAKMLRSLAEKPDNNKKIIAATLAVLIFVFALLIFCCLKRRGNRISLKDSKRDESPLLNLSSNDLSAGSSEKSFSIGHANTKNFMLNSVNNTNPLSRNLSFKAQNNHLPGEAPSSNGASPCLPLKPPPGRSAHPPPPPTQPPPQPPPPPPPPPRPPPPLKPAPSKLMHGKTKAAPPLPPRRGLCGSNDVSDSDGESYNKAKLKPFFWDKVLASSDHSMVWHEISSGSFQFNEETMESLFGYVPVNKNKGEGSRTSSSSELGVQYIKIIDGKKAQNLSILLRALNVTIEEVVDALQEGNELPMELLQTLLKMAPTADEELKLRLFIGDLNQLGPAERFLKVLVDIPFSFKRLETLLFMFTLQEELPVIKDSFATLEAPCRKWQVACKVLRNSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLSDVKGTDGKTTLLLYIVQEIIRSEGVRAVRMLRKSGPLTSESSNDVSVEHYRQLGLEVVSGLSTELEDVKKAAAIDGDGITAMVSKLGKWLVKTRDFMNSEINNLDEESGFQHSVSGFLEQAEGDIMWLMEEEKKMMSLVKSTSDYFHGDSAKDEGLRLFVIVRDFLVMLDKACKEVRSLAMKPVKVNTGRKETPKSSSASSENRHTASQVVRQRLFPAITERRTYDDFSSDEGSP 831
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 10298466 10301564 + Conep12aG0144800.1 Cone12ag1403 450247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone12ag1403 831 MobiDBLite consensus disorder prediction 783 831 - -
Cone12ag1403 831 SUPERFAMILY Formin homology 2 domain (FH2 domain) 313 777 - -
Cone12ag1403 831 MobiDBLite consensus disorder prediction 131 164 - -
Cone12ag1403 831 PANTHER FORMIN-RELATED 91 827 IPR027643 GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro)
Cone12ag1403 831 MobiDBLite consensus disorder prediction 287 330 - -
Cone12ag1403 831 MobiDBLite consensus disorder prediction 219 239 - -
Cone12ag1403 831 MobiDBLite consensus disorder prediction 271 364 - -
Cone12ag1403 831 Pfam Formin Homology 2 Domain 365 765 IPR015425 -
Cone12ag1403 831 Gene3D Formin, FH2 domain 365 805 IPR042201 -
Cone12ag1403 831 SMART it6_source 359 780 IPR015425 -
Cone12ag1403 831 MobiDBLite consensus disorder prediction 131 155 - -
Cone12ag1403 831 MobiDBLite consensus disorder prediction 223 239 - -
Cone12ag1403 831 ProSiteProfiles Formin homology-2 (FH2) domain profile. 359 792 IPR015425 -
Cone12ag1403 831 MobiDBLite consensus disorder prediction 786 806 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag1403 Cone-Chr12:10298466 Cone19ag0400 Cone-Chr19:3372812 2.87E-110 dispersed
Cone10ag1297 Cone-Chr10:10119840 Cone12ag1403 Cone-Chr12:10298466 9.96E-182 wgd
Cone12ag1403 Cone-Chr12:10298466 Cone6ag0090 Cone-Chr6:438757 2.69E-183 wgd
Cone12ag1403 Cone-Chr12:10298466 Cone9ag0106 Cone-Chr9:462691 1.91E-181 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone12ag1403 K28090 - mdm:103429074 662.529