Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone12ag1415 ATGTCAGTAGAAAGAAGATTTATTACTGTGTCGGTAATTGCAAATGACATGACGCTGTTTCTGTACTTGTTCTTGTTCTTGTTCTTCACTTCGATTCGACAATGTCGGGCGAAAGATACTATGTTGTTTGACAGCTTACTAAGCGATGAAAGAGAAGACAGTCTTGTTTCATCAGGGGAAAGATTTCAACTAGGATTCTTTACTCCTAATGGAAGCATTGATATTACAAGAAGATACCTTGGAATATGGTACTACAATTCGAATCCACGTGCCATTGTGTGGATCGCAAATCGCGACAGCCCCGTTTCGGGTCCGAACACTGTCCTTACCATTTCCAATGATGGAAACCTTAAATTGTCGGATGCGAAGGGAAATAAGGTTTTTTGGTCTACTAATCTTGAAAAGACCTCATCTTCATCATCGTTTTCTTCTTCTCTTTCCCGAACAGTGAAGCTTTTCGATGATGGAAATCTGGTCTTTACTGAAGAAGACCAAGAAGATCAATCTATAAAAATCCTCTGGCAGAGTTTTAACAACCCAACAGATACGTTTCTTCCAGGCATGAGAATGGACGAAAATTTAATCCTAACTTCATGGAAAAGCTATAATGATCCATCTCAAGGGAACTTCACTTTTCAGTTAGATCAAGATGGAGGGAATAATCAGTTCAGCATTTGGAAGAGATCAGTTAGATATTGGAAAAGTGGAGTTTCCGGAAAGTTCATCACAACAGACGAAATGCCTTCCTCAATGTTATACCTTCTTTTAAATTTCACTTCAAGTATAGTCCATAATGATTCGATCCCATATCTGATATCCTCAATGTACAATGATACGAGGTTAGTTATGAGTTCTTTGGGCCAAGCCCAGTATCTAAAACGGGACAGCGAAAAGGTCTGGTCTCTCGTTTGGATCGAGCCAAGAGATAGATGCAGTGTTTATAATGTTTGCGGAAATTTCGCTTCTTGTAATAGTAAAGGTGATGTGCTTTGTAAATGTCTGCCCGGTTTTAGTCCTTCTTCCCCGGAAAGTTGGAATGCTGGTGATTATTCCGGTGGGTGCGTTAGAAAGTCGTTGATATGCAACAAGGATTCAGGTGGGGACACTTTCTTGAGCTTAAAGATGATGAAGGCGGGAAACCCGGATTCTCAATTTAATGCAAAGAGTGATATAGAATGCAAAATAGAGTGCCTTAATAATTGCCAATGCCAAGCTTATTCATATGTGGAAGCAGAGATTATAGAACGGAGCGGGACTGGAAATCCTTCTTGTTGGATCTGGTCAGAAGACCTTAACAATCTCCAAGAGGAATATGATAGCGGCCGCGATCTCTACATTCGTGTTGCACTTTCTGATCTAGAATTGACAAAGAGAAATTGTGAAACTTGTGGGACAAACCTCATCCCTTATCCACTTAGCACGGGACCGGAATGTGGTGATCCGGTGTATTTCAATTTCAACTGCAGTGTTGCTAATGGGCAAGTAAGCTTTGAGGTACCGGGGGGAAGTTTCCGGGTCAAGAGTATAAATCCGGAAGAAAGAAAGTTTCTAGTCCAAACCAATGATGCTGGAAATTGCGGGGATAGGAATTGGACAAACAGAACTCTTAGGCTAAATGAGTCGTCTCCGTACCATGTGATCAACTGGTGCAATGCTGATGACGAAGTGGAGATTGGTTGGGACCCACCATCCGAACCGACTTGTTCTTCACAATTGGACTGTCATGATTGGCCTGATTCGACTTGCAATGTAACTGTTTATGGGAAGAAAAAATGCCTCTGTGAGACTGATTTTCACTGGGATGGCTTGGCAATGAATTGCAGTGCACACGATAGTTATAGAAAGAAAACGGATAGAAGAGAAAAGGCGGCCCTGTCTTTGATTATTGCAGTTACATTTGTAGTTCTGTTCATTTTAATGATTGTGGCTGGTACCATGTTTTATACTTATTTCTGGAGAAGCAGGCAGATGAAGAGACAACAAAGCTGGGGGAACAGTCAGAAGGATGCTGCACTTCAACTCTATGAAAACGAGAGACGAGTCAAGGATCTTCTCGAATCAGGCAGGTTTAAAGAAGAAGATACAAAAGGGATTGACATTCCGTGTTTCGATGTGGAAAGTATTTTAACTGCAACAAGTAACTTCTCAAATGCCAACAAGCTGGGACAAGGAGGATTTGGACCTGTTTACAAGGGCAAGTTTCCTGGTGGACAAGAAGTTGCTGTAAAGAGGCTTTCAAGTGGTTCGGGACAGGGCTTCGAGGAATTCAAGAACGAGGTTCTATTGATCGCAAAACTTCAGCATAGAAATCTCGTTAGACTTCTAGGCTATTGTGTTGAAGGAGATGAGAAGATGTTGCTTTATGAGTACATGCCGAACAAGAGCTTAGACTCCTTCATATTTGATCGGAAGCTATGCGTGTTACTGGACTGGGAAATGCGCTTCAAAATAATTTCGGGCATTGCTCGAGGCCTTCTGTACCTTCACCAAGATTCCAGATTGAGGATTATTCATAGAGATCTCAAAACGAGCAACATTCTTCTAGATGAGGAGATGAATCCGAAAATATCCGATTTTGGCTTGGCGAGGATCTTCGGAGGCAAAGAAACCGTTACAAATACCAAAAGAGTAGTAGGAACTTATGGGTACATGTCACCAGAGTATGCATTAGACGGGTTATTTTCGGTCAAATCCGACGTCTTCAGCTTTGGCGTAGTAATTATAGAGATGATAAGTGGAAAAAGAAACACTGGATTCTATCACTCGGAACAAGCTTTGAGTCTTTTAGGCTATGCATGGCATATGTGGATAGAAGACAAGGCAATGGATTTGATGGACCCTACACTGTGTAGGAAAAATTGCAACACAAATGAATATATGAAGTGTGTGAATTTAGGGCTTTTATGTGTACAAGAAGATCCATGTGATAGGCCTACAATGTCTAATGTGATTTTCATGCTTGGGAGTGAAACGGCAACTCTTCCTTCTCCGAAACAGCCGGCTTTCGTAGTGAGGAGATGTCCTTCCAGTCGAGCTTCTTCTTCCGGTAAACCAGAAACTTTCTCGAATAACGAGCTAACTGTCACTTTAGAAGATGGCAGATAG 3105 41.58 MSVERRFITVSVIANDMTLFLYLFLFLFFTSIRQCRAKDTMLFDSLLSDEREDSLVSSGERFQLGFFTPNGSIDITRRYLGIWYYNSNPRAIVWIANRDSPVSGPNTVLTISNDGNLKLSDAKGNKVFWSTNLEKTSSSSSFSSSLSRTVKLFDDGNLVFTEEDQEDQSIKILWQSFNNPTDTFLPGMRMDENLILTSWKSYNDPSQGNFTFQLDQDGGNNQFSIWKRSVRYWKSGVSGKFITTDEMPSSMLYLLLNFTSSIVHNDSIPYLISSMYNDTRLVMSSLGQAQYLKRDSEKVWSLVWIEPRDRCSVYNVCGNFASCNSKGDVLCKCLPGFSPSSPESWNAGDYSGGCVRKSLICNKDSGGDTFLSLKMMKAGNPDSQFNAKSDIECKIECLNNCQCQAYSYVEAEIIERSGTGNPSCWIWSEDLNNLQEEYDSGRDLYIRVALSDLELTKRNCETCGTNLIPYPLSTGPECGDPVYFNFNCSVANGQVSFEVPGGSFRVKSINPEERKFLVQTNDAGNCGDRNWTNRTLRLNESSPYHVINWCNADDEVEIGWDPPSEPTCSSQLDCHDWPDSTCNVTVYGKKKCLCETDFHWDGLAMNCSAHDSYRKKTDRREKAALSLIIAVTFVVLFILMIVAGTMFYTYFWRSRQMKRQQSWGNSQKDAALQLYENERRVKDLLESGRFKEEDTKGIDIPCFDVESILTATSNFSNANKLGQGGFGPVYKGKFPGGQEVAVKRLSSGSGQGFEEFKNEVLLIAKLQHRNLVRLLGYCVEGDEKMLLYEYMPNKSLDSFIFDRKLCVLLDWEMRFKIISGIARGLLYLHQDSRLRIIHRDLKTSNILLDEEMNPKISDFGLARIFGGKETVTNTKRVVGTYGYMSPEYALDGLFSVKSDVFSFGVVIIEMISGKRNTGFYHSEQALSLLGYAWHMWIEDKAMDLMDPTLCRKNCNTNEYMKCVNLGLLCVQEDPCDRPTMSNVIFMLGSETATLPSPKQPAFVVRRCPSSRASSSGKPETFSNNELTVTLEDGR 1034
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 10330505 10334140 - Conep12aG0146100.1 Cone12ag1415 450259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone12ag1415 1034 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 791 995 - -
Cone12ag1415 1034 Gene3D Transferase(Phosphotransferase) domain 1 791 996 - -
Cone12ag1415 1034 SUPERFAMILY Protein kinase-like (PK-like) 699 987 IPR011009 -
Cone12ag1415 1034 Pfam D-mannose binding lectin 92 194 IPR001480 -
Cone12ag1415 1034 ProSiteProfiles EGF-like domain profile. 307 343 IPR000742 -
Cone12ag1415 1034 Pfam Protein tyrosine and serine/threonine kinase 718 984 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone12ag1415 1034 Gene3D - 37 179 IPR036426 -
Cone12ag1415 1034 Pfam S-locus glycoprotein domain 233 340 IPR000858 GO:0048544(InterPro)
Cone12ag1415 1034 ProSitePatterns Serine/Threonine protein kinases active-site signature. 836 848 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone12ag1415 1034 CDD EGF_CA 309 338 - -
Cone12ag1415 1034 Pfam PAN-like domain 361 433 IPR003609 -
Cone12ag1415 1034 Gene3D Phosphorylase Kinase; domain 1 677 790 - -
Cone12ag1415 1034 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 680 790 - -
Cone12ag1415 1034 ProSiteProfiles PAN/Apple domain profile. 361 449 IPR003609 -
Cone12ag1415 1034 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 23 1000 - -
Cone12ag1415 1034 SMART serkin_6 715 986 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone12ag1415 1034 ProSiteProfiles Protein kinase domain profile. 715 1002 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone12ag1415 1034 SUPERFAMILY alpha-D-mannose-specific plant lectins 92 205 IPR036426 -
Cone12ag1415 1034 SMART ntp_6 365 448 IPR003609 -
Cone12ag1415 1034 ProSiteProfiles Bulb-type lectin domain profile. 40 173 IPR001480 -
Cone12ag1415 1034 CDD STKc_IRAK 721 987 - -
Cone12ag1415 1034 Pfam Domain of unknown function (DUF3403) 989 1034 IPR021820 GO:0004674(InterPro)
Cone12ag1415 1034 SMART blect_4 44 180 IPR001480 -
Cone12ag1415 1034 MobiDBLite consensus disorder prediction 1010 1034 - -
Cone12ag1415 1034 CDD PAN_AP_plant 359 449 - -
Cone12ag1415 1034 CDD B_lectin 44 180 IPR001480 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag1305 Cone-Chr10:10183519 Cone12ag1415 Cone-Chr12:10330505 0 dispersed
Cone12ag1415 Cone-Chr12:10330505 Cone3ag1372 Cone-Chr3:32704170 6.83E-245 dispersed
Cone12ag1413 Cone-Chr12:10327058 Cone12ag1415 Cone-Chr12:10330505 0 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81987 PF00248 Aldo_ket_red 1.30E-25 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone12ag1415 - - - 0.0