Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone12ag1430 ATGAGAGGTTACTCCTTCTTCCAGAGAGCCTCTGTGGCCTTCCATGACTACCCCACACTCTCTAAGATTCTCGTTGTATTCTCTGTCAGTGGTGGAGGAATGGTTGCATATTCCCAAGGCAGAACATTCTACACTGCATATGCTGACGCCGGCCGACCAGACGACCAGAGTAAGAGGAAGAAGGTGGTTGTGGTTGGAACTGGATGGGGCGGGACCAGTTTCTTGAAAAACCTGAAAAGTTCATCGTACGATGTTCATGTCGTCTCCCCTCAAAACTATTTCGCATTCACTCCTTTGCTGCCGAGTGTCACTTGCGGAACCGTTGAAGCTCGCAGCATCGTCGAACCAATCCGAAGCATCACCAAGAAGAACGGCTTAGAGATACAATTCAGGGAAGGTCAATGCTACAAGATCGATGCTCAGAAGAAAAAAATATACTGTGAATCAAAGAACCACACAAGTTTGGGCGGGAAAGAAGAATTCTCCATGGACTATGACTACTTGATCATAGCAATGGGAGCAAAATCAAACACATTCAACACGCCTGGCGTTGAAGAGCATGCCCATTTCTTAAAAGCAGTAGAAGATGCTCAGAGGATCCGTCAATCAGTTCTAGACTGTTTCGAAAGAGCAAGTCTCCCTAGTTTAAGTGAAGAAGAGAAGAAAAGAATCCTCCATTTTGTAATTGTAGGAGGCGGTCCCACCGGAGTCGAATTTGCCGCAGAGCTTCACGACTTTGTGACAGAGGATTTGTCCAATTTATACCCTTCACTTAAAGACCATGCTAAAATCACTCTCCTTGAAGCAGGGGATCATATTCTGAACATGTTCGATAAAAGAATTTCTGAATTTGCTGAAACCAAGTTCCAAAGGGACGGAATCGATGTGAAAACTGGGTCAATGGTGGTTAAGCTATCCGACAAGGAAATCTCGACGAAAGAAAGAGCAACCGGACAGAACGTGTCTATACCTTATGGAATGGTTGTCTGGTCAACTGGGATCGGGCCCCGTCCGGAAGTTGTCGACTTCATGAAACAGATTGGTCAGAATAACCGCCGAGCGTTGGCGACGGACGAGTGGCTTAGGGTCGAAGGATGCGACGGGGTCTACGCGTTGGGGGATTGCGCGACGATAAATCAGCGCAAGGTCATGGAAGATATTTCAGTGATATTTAGCAAGGCAGATAAGAACAAATTGGGTACTCTTAGTGTGAAGGACTTCAAAGAAGTGGTAAATGATATTTGTGAAAGGTATCCACAAGTTCAGCTCTACTTGAAGAAGAAACAGATGAAGAATTTCAATCAATTGCTGACTATAACCGAAGGTGATGCCAAGAAACAACAGCCTGCTGAAATGGACATAGAAAGATTCAAATCTGCTCTATCTGAAGTGGATTCTCAGATGAAGAATCTACCAGCAACAGCTCAGGTTGCAGCTCAACAAGGTGAGTATCTTGCAGGCTGTTACAACCGCTGGGAGCAGTGTGAAACTTATCCAGAAGGCCCTCTTAGGTTTCGAGGATCCGGTCGTCATCGTTTCCATCCCTTCAGGTATAAGCATTTGGGGCAGTTTGCTCCACTGGGTGGGGAGCAAACAGCTGCACAGCTTCCTGGAGATTGGGTTTCCATTGGCAAGAGTTCCCAGTGGCTTTGGTACTCTGTCTATGCAAGTAAGCAGGTGAGCTGGCGTACAAGGATGTTGGTGGTTTCTGATTGGATCAGGACCTCAGTCTTTGGAAGGGATTCTAGCAGAATCTGA 1758 46.25 MRGYSFFQRASVAFHDYPTLSKILVVFSVSGGGMVAYSQGRTFYTAYADAGRPDDQSKRKKVVVVGTGWGGTSFLKNLKSSSYDVHVVSPQNYFAFTPLLPSVTCGTVEARSIVEPIRSITKKNGLEIQFREGQCYKIDAQKKKIYCESKNHTSLGGKEEFSMDYDYLIIAMGAKSNTFNTPGVEEHAHFLKAVEDAQRIRQSVLDCFERASLPSLSEEEKKRILHFVIVGGGPTGVEFAAELHDFVTEDLSNLYPSLKDHAKITLLEAGDHILNMFDKRISEFAETKFQRDGIDVKTGSMVVKLSDKEISTKERATGQNVSIPYGMVVWSTGIGPRPEVVDFMKQIGQNNRRALATDEWLRVEGCDGVYALGDCATINQRKVMEDISVIFSKADKNKLGTLSVKDFKEVVNDICERYPQVQLYLKKKQMKNFNQLLTITEGDAKKQQPAEMDIERFKSALSEVDSQMKNLPATAQVAAQQGEYLAGCYNRWEQCETYPEGPLRFRGSGRHRFHPFRYKHLGQFAPLGGEQTAAQLPGDWVSIGKSSQWLWYSVYASKQVSWRTRMLVVSDWIRTSVFGRDSSRI 585
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 10384867 10387567 + Conep12aG0147600.1 Cone12ag1430 450274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone12ag1430 585 SUPERFAMILY FAD/NAD(P)-binding domain 220 379 IPR036188 -
Cone12ag1430 585 Gene3D - 52 451 - -
Cone12ag1430 585 Gene3D - 452 584 - -
Cone12ag1430 585 PRINTS FAD-dependent pyridine nucleotide reductase signature 226 244 - -
Cone12ag1430 585 PRINTS FAD-dependent pyridine nucleotide reductase signature 354 376 - -
Cone12ag1430 585 PRINTS FAD-dependent pyridine nucleotide reductase signature 165 183 - -
Cone12ag1430 585 PRINTS FAD-dependent pyridine nucleotide reductase signature 62 81 - -
Cone12ag1430 585 Pfam Pyridine nucleotide-disulphide oxidoreductase 60 380 IPR023753 GO:0016491(InterPro)
Cone12ag1430 585 ProSiteProfiles EF-hand calcium-binding domain profile. 382 417 IPR002048 GO:0005509(InterPro)
Cone12ag1430 585 SUPERFAMILY FAD/NAD(P)-binding domain 59 278 IPR036188 -
Cone12ag1430 585 Pfam NDH2 C-terminal domain 520 581 IPR054585 -
Cone12ag1430 585 PANTHER NADH DEHYDROGENASE 47 585 IPR045024 GO:0003954(InterPro)|GO:0006116(InterPro)
Cone12ag1430 585 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 428 584 - -
Cone12ag1430 585 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 51 411 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag1430 Cone-Chr12:10384867 Cone6ag1051 Cone-Chr6:6132461 8.42E-303 dispersed
Cone12ag1429 Cone-Chr12:10380651 Cone12ag1430 Cone-Chr12:10384867 1.35E-272 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone12ag1430 K03885 - csv:101209855 945.266