Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone12ag1436 | ATGGGGCGGAAGAGATCTGGTTTGAGGAAGAAGAATCTGGGGATCTACGCACAGTTTTTAGCGGGCTTCGTGTTGATCTGTGCTGTACAAGTTTCGCTTGGAATTACTAATCCCAATGACTTTACTGCCATTAGTAACTTGTATACTTCGTGGGGTTCCCCTGTTCTTCCTGGCTGGGGTGTTGGACAAGACCCGTGTGGTGATAAGTGGCAAGGCGTTGAATGTAATAACTCCGTCATTATAAGAATAGTTATTAATGCTGCTACTTTGGGAGGAGAGTTGAGTGATAGCTTGGGAATGTTCACTTCTATCCAATCAATAGACCTCAGCAACAATAACATTGGGGGAAGTATTCCATCGAACTTGCCTGTTACTATGCAAAACCTTTTTCTTTCAGCTAATCAATTTACTGGAAGCATCCCAAGTTCCTTATCATCTTTGACTCAGCTAGCAGCCATGTCACTGAATGACAATCACTTAAGTGGAGAAATACCAGATTCTTTTGCAGCTCTTACAGGATTGGTCAACTTGGACTTATCCAGCAACAATTTTAGCGGTCCACTGCCTTCCTCTCTACAAGATTTAGTGGTTTTGACCACTCTGCGTTTGCAGAATAATCAGCTTTTGGGGACCCTCAACGTTTTACAGGATCTTCCAATAAAAGACTTGAATGTAGAGAATAATCTCTTCTCTGGACCCATACCTGAAAAGTTACTGAATATCCCAACTTTTAGAAAGGATGGAAACCCATGGAATTCTACTGTTTCTCCAGCATCTCCACCTTCACTCTCATCAAAGCCTTCACAGGCGGGTCCATCACCATCATTTTTTCCAACACCACCTTCTGGGAAGTCACCCGCAAAACAGTCTGATGGACCATCTGCCTCAAAGGAATCAAATGCTGGAAAAAAGGGTAAATCTACCAAAAGGGTAGTTTGGATATCAATTGCAGGAGTGTTGTCATTTATTATTTTGGCTCTAGCACTTGTGCTTTTTATGCCAAGGTGTATGAAAAGGAGCAGAAGGGCCGACGCAATTTCCAAGCGGCATCAAATAGGTGCTTACAGGGGTGACAGAGAGAGTCCCAGGCACAGTCCCTTGGTCCAGCCAACCAGTGAAACACATAAAGTTCCAATACCTAAGGAGGATGTTCCAGTGCCAAAGGAGGAACATCAAACAGAGACTCAAAGAGTGGGGGCAATACGAAAGCCACAGAAAGAGAAAGAGAGAGATATGCAAAGAATGGGCATAAGACCAAAACAAGATGATCATGAGATAGACATTAGTGCAGATGATGTTCATCTGATGCCTCCTCCTCCACCACCACCTCCTGTTCAGAAGGTCATCGTTGAACCTATTGTTCCAGCTGAAGTTTCTCCTGTAAGGCCTTCCAGCAGAACAATCAATACCCCTACTTTTGCAAAGTCCTTCACCATTGCATCCCTTCAGCAATATACAAATAGCTTTTCACAAGAGAATCTCATTGGAGTCGGAATGCTGGGTAGTGTTTATAGGGCACGGCTTCCTAATGGAAAGCTGCTTGCGGTGAAGAAACTGGACAAAAGAGCTTCCAGTGTGCAGAAGAACAATGAATTCCTTGAGTTAGTGAACGACATTGATAAAATCCGACATGCAAATGTCGTTGAACTTGTGGGCTGTTGTGCGGAGCATGATCAAAGGCTTCTGATTTACGAGTACTGCATTAATGGAACTCTACAGGACGCTCTACATTCAGATGAGGAATTCAAAAAGAAACTCTCTTGGAATGCCCGTGTTCGAATGGCCCTTGGGGCTGCTAGAGCACTAGAGTACTTGCATGAGGTCTGTCATCCGCCTGTTATACACAGGAACTTCAAGTCTGCAAATGTTCTTCTTGATGATGAACTCTCTGTGCATGTCTCTGATTGTGGTTTAGCTCGATTGATATCATCTGGTTCTGTTAGTCAGTTATCAGGGCATCTACTATCAATGTATGGCTATGGGGCTCCAGAATTTGAATCCGGCATTTATACGCTTCAAAGTGACGGTTATAGCTTTGGGGTTGTCATGTTAGAGCTTTTGACCGGCCGAATGTCCTATGACAAGGCAAAGACTAGAGGAGAGCAATTTCTGGTGAGATGGGCAATCCCACAGCTTCATGACATTGATGCATTATCAAGAATGGTTGATCCTTCTCTCCATGGTCAATATCCAGCAAAATCCTTGTCGCACTTTGCCGATATCATATCTCGATGTGTTCAGCCGGAGCCTGAATTCAGGCCACTCATGTCAGAAGTTGTACAGGACTTATTTGACATGCTAAGGAGAGAGCCACGTGGCAGTGGATCAAGCCAGGATTGA | 2340 | 44.06 | MGRKRSGLRKKNLGIYAQFLAGFVLICAVQVSLGITNPNDFTAISNLYTSWGSPVLPGWGVGQDPCGDKWQGVECNNSVIIRIVINAATLGGELSDSLGMFTSIQSIDLSNNNIGGSIPSNLPVTMQNLFLSANQFTGSIPSSLSSLTQLAAMSLNDNHLSGEIPDSFAALTGLVNLDLSSNNFSGPLPSSLQDLVVLTTLRLQNNQLLGTLNVLQDLPIKDLNVENNLFSGPIPEKLLNIPTFRKDGNPWNSTVSPASPPSLSSKPSQAGPSPSFFPTPPSGKSPAKQSDGPSASKESNAGKKGKSTKRVVWISIAGVLSFIILALALVLFMPRCMKRSRRADAISKRHQIGAYRGDRESPRHSPLVQPTSETHKVPIPKEDVPVPKEEHQTETQRVGAIRKPQKEKERDMQRMGIRPKQDDHEIDISADDVHLMPPPPPPPPVQKVIVEPIVPAEVSPVRPSSRTINTPTFAKSFTIASLQQYTNSFSQENLIGVGMLGSVYRARLPNGKLLAVKKLDKRASSVQKNNEFLELVNDIDKIRHANVVELVGCCAEHDQRLLIYEYCINGTLQDALHSDEEFKKKLSWNARVRMALGAARALEYLHEVCHPPVIHRNFKSANVLLDDELSVHVSDCGLARLISSGSVSQLSGHLLSMYGYGAPEFESGIYTLQSDGYSFGVVMLELLTGRMSYDKAKTRGEQFLVRWAIPQLHDIDALSRMVDPSLHGQYPAKSLSHFADIISRCVQPEPEFRPLMSEVVQDLFDMLRREPRGSGSSQD | 779 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 10403858 | 10408388 | - | Conep12aG0148800.1 | Cone12ag1436 | 450280 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone12ag1436 | 779 | MobiDBLite | consensus disorder prediction | 376 | 419 | - | - | |
Cone12ag1436 | 779 | SUPERFAMILY | L domain-like | 55 | 243 | - | - | |
Cone12ag1436 | 779 | MobiDBLite | consensus disorder prediction | 282 | 301 | - | - | |
Cone12ag1436 | 779 | FunFam | Protein STRUBBELIG-RECEPTOR FAMILY 8 | 456 | 566 | - | - | |
Cone12ag1436 | 779 | Gene3D | Transferase(Phosphotransferase) domain 1 | 568 | 770 | - | - | |
Cone12ag1436 | 779 | MobiDBLite | consensus disorder prediction | 250 | 307 | - | - | |
Cone12ag1436 | 779 | SUPERFAMILY | Protein kinase-like (PK-like) | 463 | 764 | IPR011009 | - | |
Cone12ag1436 | 779 | MobiDBLite | consensus disorder prediction | 250 | 272 | - | - | |
Cone12ag1436 | 779 | FunFam | protein STRUBBELIG-RECEPTOR FAMILY 3 | 37 | 262 | - | - | |
Cone12ag1436 | 779 | FunFam | protein STRUBBELIG-RECEPTOR FAMILY 8 | 567 | 776 | - | - | |
Cone12ag1436 | 779 | Gene3D | Ribonuclease Inhibitor | 38 | 264 | IPR032675 | - | |
Cone12ag1436 | 779 | Pfam | Protein tyrosine and serine/threonine kinase | 492 | 763 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone12ag1436 | 779 | Pfam | Leucine Rich Repeat | 174 | 195 | IPR001611 | GO:0005515(InterPro) | |
Cone12ag1436 | 779 | Pfam | Leucine Rich Repeat | 103 | 122 | IPR001611 | GO:0005515(InterPro) | |
Cone12ag1436 | 779 | Pfam | Leucine Rich Repeat | 127 | 147 | IPR001611 | GO:0005515(InterPro) | |
Cone12ag1436 | 779 | MobiDBLite | consensus disorder prediction | 342 | 363 | - | - | |
Cone12ag1436 | 779 | ProSiteProfiles | Protein kinase domain profile. | 489 | 765 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone12ag1436 | 779 | PANTHER | LEUCINE RICH REPEAT KINASE 2 | 84 | 763 | IPR051420 | - | |
Cone12ag1436 | 779 | MobiDBLite | consensus disorder prediction | 342 | 419 | - | - | |
Cone12ag1436 | 779 | Gene3D | Phosphorylase Kinase; domain 1 | 459 | 566 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone12ag1436 | Cone-Chr12:10403858 | Cone5ag1846 | Cone-Chr5:12958518 | 3.21E-125 | dispersed | |
Cone12ag1436 | Cone-Chr12:10403858 | Cone6ag1064 | Cone-Chr6:6225237 | 3.80E-185 | wgd | |
Cone12ag1436 | Cone-Chr12:10403858 | Cone8ag1487 | Cone-Chr8:11333661 | 0 | wgd | |
Cone12ag1436 | Cone-Chr12:10403858 | Cone9ag1056 | Cone-Chr9:5752906 | 1.91E-182 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
81989 | None | None | None | None | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone12ag1436 | - | - | - | 0.0 |