Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone12ag1474 | ATGGGAACAGTTCAGCTATGGTCCTTAATCACTCCAGTAAATCCTGCAAGTACATGGGGTCCACTTATCTTTATTTTTGCGGTCTCTGCAACCAAAGAGGCATGGGATGATTACAATAGATATCTATCAGATAAGAAAGCAAATGAGAAAGAAGTTTGGGTTGTCAAGAAGGGTATTAAAAAGCTAATCCAAGCACAAGATATACATGTAGGTGATATCGTGTGGCTCAGAGAGAACGATGAAGTGCCGTGTGATCTTGTTTTGATTGGTACCTCTGATCCACAAGGACTTTGCTATATTGAGACATCCGCCCTTGATGGTGAAACAGATTTGAAGACAAGGATCATACCCTCTGCTTGCATGGGAATGGATATTGAACTATTGCACAAAATCAAGGGTGTTATTGAATGTCCTAATCCAGATAAGGATATTAGGAGATTTGATGCAAATATCCGGTTATTTCCTCCATTTATTGACAATGACTTGTGCCCTTTAACCATAAAAAACACAATTCTCCAGTCATGTTATTTGCGCAACACAGATTGGGCATGTGGAGTTGCTGTTTACACAGGAAATGAAACAAAGCTGGGTATGAGCAGGGGTGTACCGGAGCCAAAACTTACAGCCGTGGATGCAATGATCGACAAGTTAACTGGAGCTATATTTGTCTTTCAAATTGTAGTTGTTATTGTTCTGGGTATAGCCGGAAATGTGTGGAAGGATACTGAGGCAAGAAAGCAATGGTACGTTCAGTATCCAAAGGAGGGTCCATGGTATGAGCTGTTGGTCATCCCGCTTCGGTTTGAGCTTCTCTGTTCAATCATGATTCCTATATCAATCAAGGTGTCTCTTGATCTAGTGAAGAGCTTGTATGCAAAATTCATTGATTGGGACAATGAGATGATTGACCATGAAACTGGTATCCCATCCCATGCTACAAATACAGCAATAAGCGAAGACTTGGGACAAGTTGAGTACATATTGACAGACAAAACTGGTACTCTTACTGAAAACAAAATGATCTTCAGAAGATGTTGTATCACTGGCATTTTCTATGGAAATGAAAGCGGGGATGCCTTGAAAGATCAAGAGCTGCTTGATGCCATTGCCAACAGTTCTCCAGAGGTTATACTCTTCCTCACTATTATGGCCATATGTAATACGGTTGTACCTATGAAGAGCAAACATGGAGATGTCTTGTACAAGGCGCAGTCACAGGATGAGGATGCTCTTGTGCGTGCTGCTGCTAAAATGCACATGGTTTTTTCCAATAAGAATGGAAATATTCTTGAGATTAGGTTCAATGGTTCAATATTTCAATATGAAATCCTGGAAACTCTAGAGTTCACTTCTGAAAGGAAAAGAATGTCAATAGTGGTGAAAGATTTTCAGAGTGGGAAGATTTTGCTTCTGTCAAAAGGAGCAGATGAAGCAGTTCTTCCTCATGCATGTGCCGGACAGCAAACTAGAGTATTTAATGAAGCTGTTGAGCAATATGCTCAATTGGGGCTCCGTACGCTATGTTTGGCTTGGCGTGAATTAAAGGAAGATGAATATCAAGAATGGTCATTGACATTTAAAGAAGCTAGTAGCACATTGGTTGATAGGGAGTGGAGACTAGCTGAGGTATGCCAAAGGTTAGAGCACAATCTCGAAGTCCTTGGAGTTACTGCTATAGAGGATCGGTTACAGGATGGTGTCCCAGAGACAATAGAATCTCTAAGAAAAGCAGGAATAAACTTTTGGATGCTGACAGGAGACAAGCAAAATACTGCCATCCAGATTGCTCTTTCTTGTAACTTCATTTCCCTAGAGCCAAAAGGTCAGCTTCTGTTAATTGATGGGAAAACTGAAGATGAAATTCGTAGAAGTTTGGAGAGTGTCTTACTCACAATGAAGATAACATCTGCAGAACCGAAGGATGTTGCTTTTGTTGTAGACGGCTGGGCTCTTGAAATTGCCCTCAAACATTATAAGAAGCCTTTCACTGAATTAGCAATATTGTCAAGGACTGCAATATGTTGCCGTGTGACACCATCACAAAAGGCACAGCTTGTGGAACTCCTAAAATCATGTGACTATAGAACATTAGCTATTGGGGATGGTGGGAATGATGTGAGGATGATACAACAAGCTGATATTGGTGTTGGCATCAGTGGCAGGGAAGGACTGCAGGCTGCAAGAGCAGCTGATTATAGTATTGGAAAGTTCAGATTTCTGAAGAGATTGATTCTTGTCCATGGGAGATACTCGTACAACCGCACAGCATTTTTGTCTCAGTATTCCTTTTATAAATCCTTACTCATATGTTTCATCCAAATCTTTTTTTCTTTCATTTCAGGTGTCTCTGGAACTAGTCTCTTTAATTCTGTCAGCTTGATGGCTTATAATGTTTTCTACACAAGTATTCCTGTTCTAGTCAGTGTTCTTGATAAAGATCTTAGTGAAGAAACAGTGATGCAGCATCCCCAAATTTTGTTTTACTGTCAAGCTGGAAGGCTTCTAAATCCTAGTACATTTGCTGGATGGTTCGGGCGATCTCTATACCATTCAATTGCTGTATTTGTAGTCAGTATACACGCCTATGCGAATGAGAAAAGTGAAATGGAGGAGCTTTCAATGGTGGCACTCTCTGGATGCATATGGTTACAGGCTTTTCTCGTAGCTTTAGAGACCAATTCATTTACTATACTGCAACACCTTGCCATATGGGGAAATTTAGCTGGTTTCTACGTCCTCAACTGTATTCTCAGTGCCCTTCCATCATCTGGCATGTATATGATTATGTTCCGGTTATTTAGACAACCGTCATACTGGATAACAATGCTTCTCATAGTGGCAGTGGGGATGGGTCCAATTCTAGCTCTCAAGTACTTCCGGTATACATACAGACCAAGCAAAATCAACATACTTCAACAGGCAGAACGTCTAGGCGGTCCCATCATGTTTCTTGGAAACATAGAGCCACAACCAAGATCCGTCGAGAAAGACGTCTCACCATTGTCAATAACCCAACCCAAAAACAGAAATCCAGTATACGAGCCTCTATTATCGGACTCGCCAAATTCTACTAGAAGGTCATTCGGTCCTGGTGCACCATTTGATTTCTTTCAACACCAGTCTAGACTGTCTTCTTCAAGCTACTCCAGAAACTGCAAGGATAACTAG | 3168 | 41.04 | MGTVQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKKGIKKLIQAQDIHVGDIVWLRENDEVPCDLVLIGTSDPQGLCYIETSALDGETDLKTRIIPSACMGMDIELLHKIKGVIECPNPDKDIRRFDANIRLFPPFIDNDLCPLTIKNTILQSCYLRNTDWACGVAVYTGNETKLGMSRGVPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGIAGNVWKDTEARKQWYVQYPKEGPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDNEMIDHETGIPSHATNTAISEDLGQVEYILTDKTGTLTENKMIFRRCCITGIFYGNESGDALKDQELLDAIANSSPEVILFLTIMAICNTVVPMKSKHGDVLYKAQSQDEDALVRAAAKMHMVFSNKNGNILEIRFNGSIFQYEILETLEFTSERKRMSIVVKDFQSGKILLLSKGADEAVLPHACAGQQTRVFNEAVEQYAQLGLRTLCLAWRELKEDEYQEWSLTFKEASSTLVDREWRLAEVCQRLEHNLEVLGVTAIEDRLQDGVPETIESLRKAGINFWMLTGDKQNTAIQIALSCNFISLEPKGQLLLIDGKTEDEIRRSLESVLLTMKITSAEPKDVAFVVDGWALEIALKHYKKPFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGVSGTSLFNSVSLMAYNVFYTSIPVLVSVLDKDLSEETVMQHPQILFYCQAGRLLNPSTFAGWFGRSLYHSIAVFVVSIHAYANEKSEMEELSMVALSGCIWLQAFLVALETNSFTILQHLAIWGNLAGFYVLNCILSALPSSGMYMIMFRLFRQPSYWITMLLIVAVGMGPILALKYFRYTYRPSKINILQQAERLGGPIMFLGNIEPQPRSVEKDVSPLSITQPKNRNPVYEPLLSDSPNSTRRSFGPGAPFDFFQHQSRLSSSSYSRNCKDN | 1055 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 12 | 10532489 | 10539852 | - | Conep12aG0152600.1 | Cone12ag1474 | 450318 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone12ag1474 | 1055 | SFLD | Haloacid Dehalogenase | 311 | 750 | - | - | |
| Cone12ag1474 | 1055 | SUPERFAMILY | Calcium ATPase, transduction domain A | 49 | 197 | IPR008250 | - | |
| Cone12ag1474 | 1055 | PRINTS | P-type cation-transporting ATPase superfamily signature | 328 | 342 | - | - | |
| Cone12ag1474 | 1055 | PRINTS | P-type cation-transporting ATPase superfamily signature | 577 | 587 | - | - | |
| Cone12ag1474 | 1055 | PRINTS | P-type cation-transporting ATPase superfamily signature | 101 | 115 | - | - | |
| Cone12ag1474 | 1055 | PRINTS | P-type cation-transporting ATPase superfamily signature | 699 | 718 | - | - | |
| Cone12ag1474 | 1055 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 3 | 972 | - | GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER) | |
| Cone12ag1474 | 1055 | Gene3D | - | 551 | 739 | IPR023214 | - | |
| Cone12ag1474 | 1055 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 335 | 520 | IPR023299 | GO:0000166(InterPro) | |
| Cone12ag1474 | 1055 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 16 | 965 | IPR023298 | - | |
| Cone12ag1474 | 1055 | Gene3D | - | 398 | 534 | IPR023299 | GO:0000166(InterPro) | |
| Cone12ag1474 | 1055 | Gene3D | - | 24 | 200 | - | - | |
| Cone12ag1474 | 1055 | NCBIfam | phospholipid-translocating P-type ATPase | 373 | 972 | IPR006539 | GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro) | |
| Cone12ag1474 | 1055 | MobiDBLite | consensus disorder prediction | 997 | 1027 | - | - | |
| Cone12ag1474 | 1055 | SUPERFAMILY | HAD-like | 323 | 754 | IPR036412 | - | |
| Cone12ag1474 | 1055 | Pfam | Phospholipid-translocating P-type ATPase C-terminal | 727 | 966 | IPR032630 | - | |
| Cone12ag1474 | 1055 | NCBIfam | HAD-IC family P-type ATPase | 549 | 607 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cone12ag1474 | 1055 | NCBIfam | HAD-IC family P-type ATPase | 665 | 783 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cone12ag1474 | 1055 | FunFam | Phospholipid-transporting ATPase | 24 | 200 | - | - | |
| Cone12ag1474 | 1055 | Pfam | E1-E2 ATPase | 48 | 242 | - | - | |
| Cone12ag1474 | 1055 | Pfam | Cation transport ATPase (P-type) | 384 | 482 | - | - | |
| Cone12ag1474 | 1055 | Pfam | haloacid dehalogenase-like hydrolase | 628 | 717 | - | - | |
| Cone12ag1474 | 1055 | SFLD | p-type atpase | 311 | 750 | IPR044492 | - | |
| Cone12ag1474 | 1055 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 330 | 336 | IPR018303 | - | |
| Cone12ag1474 | 1055 | MobiDBLite | consensus disorder prediction | 995 | 1036 | - | - | |
| Cone12ag1474 | 1055 | FunFam | Phospholipid-transporting ATPase | 398 | 541 | - | - | |
| Cone12ag1474 | 1055 | FunFam | Phospholipid-transporting ATPase | 551 | 738 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone12ag1474 | Cone-Chr12:10532489 | Cone3ag0482 | Cone-Chr3:2347796 | 1.43E-167 | dispersed | |
| Cone12ag1474 | Cone-Chr12:10532489 | Cone8ag1520 | Cone-Chr8:11463080 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone12ag1474 | K01530 | - | mdm:103444465 | 1860.88 |