Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone12ag1482 ATGGCATCCAGTGGGATTAGTTTTACCCATATTGTTCCTACATTCTTCATAATCTCTCTACTAATCACCTTCTTGTCAGCAGCCAATGCACAACTTTCCCCAGGCTTCTACGCGAAAACTTGCCCTGACCTCGAAAACTTAGTCCGCATCGGAATGAAAAGAGCTGTTTTTAAGGAAACGAGGATTGCTGCCTCTATCCTTCGCTTGTTCTTCCACGATGCTTTCGTGCAAGGTCCAGATGCATCTATATTACTTGACGACACTCCAACATTCACCGGTGAAAAGAATGCATTCCCCAACGTAAACTCAGCCAGAGGGTTTGAAGTAATTGACGACATCAAATCTCGTGTCGAGTCAGCTTGCACTGCCACTGTCTCCTGTGCGGATATACTCACCCTCGCAGCCCGTGACGGCGTCGTTCTGCTGGGTGGGCCTTATTGGGACGTACCACTAGGACGAAGAGACTCAAGAACGGCGAATCAAACCGCCGCAAATATGGATCTACCACCTCCATTTGCTGACCTGGCAACGCTTAAATCCATGTTCGCAGCCAAAGGGCTATACGAACGGGACATGACGGCTCTATCTGGGGCCCACACAATTGGCTTCTCCCAGTGCGCGAATTTCCGAGACCGTATCTACAACGACACCAACATCGACCCATTTTTTGCTAGGAATCTGCGTGCCAGGTGTTCTGTTTCTGGTGGTGATTCCAATCTGGGCTCACTAGATGTAGGAAGCCCGTTGAGATTCGACAACAAATATTACATGAACTTATTGGGCCAACGTGGGCTGCTCCATTCGGACCAAGAGCTGTTCAAAAACGATGGAAGTTCAGTGTCGAAGTTGGTCAGGAGCTATGCATTAAACGGCGTGTCGTTTGCTAGAGATTTTACTGCTGCCATGATCAAACTGGGAAATATTACTCCTCTCACTGGCAATGCTGGAGAGATCAGAAGAAATTGCAGGGTAGTCAACTGA 981 48.22 MASSGISFTHIVPTFFIISLLITFLSAANAQLSPGFYAKTCPDLENLVRIGMKRAVFKETRIAASILRLFFHDAFVQGPDASILLDDTPTFTGEKNAFPNVNSARGFEVIDDIKSRVESACTATVSCADILTLAARDGVVLLGGPYWDVPLGRRDSRTANQTAANMDLPPPFADLATLKSMFAAKGLYERDMTALSGAHTIGFSQCANFRDRIYNDTNIDPFFARNLRARCSVSGGDSNLGSLDVGSPLRFDNKYYMNLLGQRGLLHSDQELFKNDGSSVSKLVRSYALNGVSFARDFTAAMIKLGNITPLTGNAGEIRRNCRVVN 326
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 10585806 10586961 - Conep12aG0153400.1 Cone12ag1482 450326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone12ag1482 326 ProSitePatterns Peroxidases active site signature. 63 74 IPR019794 GO:0004601(InterPro)
Cone12ag1482 326 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag1482 326 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag1482 326 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag1482 326 PRINTS Plant peroxidase signature 143 158 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag1482 326 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag1482 326 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag1482 326 PRINTS Plant peroxidase signature 105 118 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag1482 326 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag1482 326 PRINTS Plant peroxidase signature 190 202 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag1482 326 FunFam Peroxidase 169 305 - -
Cone12ag1482 326 CDD secretory_peroxidase 31 325 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cone12ag1482 326 ProSiteProfiles Plant heme peroxidase family profile. 31 326 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag1482 326 SUPERFAMILY Heme-dependent peroxidases 31 326 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag1482 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 191 201 IPR019793 -
Cone12ag1482 326 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag1482 326 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag1482 326 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag1482 326 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag1482 326 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag1482 326 Gene3D Peroxidase, domain 2 169 306 - -
Cone12ag1482 326 Pfam Peroxidase 52 288 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag1482 326 PANTHER PEROXIDASE 72-RELATED 20 325 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag1482 326 FunFam Peroxidase 35 176 - -
Cone12ag1482 326 Gene3D - 36 326 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag1482 Cone-Chr12:10585806 Cone5ag0153 Cone-Chr5:650032 4.90E-117 dispersed
Cone12ag1482 Cone-Chr12:10585806 Cone5ag1048 Cone-Chr5:4588404 9.78E-118 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone12ag1482 K00430 - vvi:100259249 413.69