Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone12ag1483 | ATGGAGGCAGATCGCGAGTACAGAAGCAAAGAGAGGATCGTACTAGTTTCTATCGTCGCGCTTGCTTCTCTAGCCCTAGCTTCGTTGTTCGTCGCCTTGTGCTATTACATCTATATCAGCAACAAGATCTCCAATCGTCTTAAGAAGCTTAAAAGGATTGATCATGGTGATAAAGTTTGTTTTCAAAATCTGAAAGTCGCTACTGAGAAAGGACTTCAGGTATTCACCTACAAGCAGCTACACTCTGCAACTGGTGGTTTCAGCAAGTCTAATGTGGTTGGGCATGGTGGCTTTGGGCTAGTATACAGGGGAGTGCTTAGCGATGGGAGGAAAGTTGCAATTAAGTTGATGGATCAAGCAGGAAAGCAGGGAGAAGATGAATTTACAGTGGAGGTTGAATTGCTAAGTTGGCTTCGCTCTCCATATTTGCTGGCACTGCTTGGGTATTGCACAGATAACAATCATAAGTTGCTGGTGTATGAATTTATGGCGAATGGAGGGTTGCAGGAGCATTTGTATCCTGTTAGCAGTTCCATTTCTGTCTGCTTGAAGTTGGACTGGGACACACGGTTGAGAATTGCTTTTGAAGCTGCAAAAGGCTTGGAGTATCTACATGAACATGTCAGTCCTCCAGTGATTCACAGGGATTTTAAGAGCAGCAATATTTTGCTCGACACAAATTTTCATGCCAAAGTTTCTGATTTTGGATTAGCCAAGATTGGATCAGACAAAGCAGGCGGGCATGTCTCTACTAGAGTATTGGGCACACAGGGATATGTTGCCCCCGAATATGCATTAACAGGCCATCTCACGACTAAGTCAGATGTCTACAGTTATGGGGTTGTCCTTTTGGAGCTGCTCACAGGAAAAGTTCCAGTAGACATGAAAAGACCTCCTGGAGAAGCTGCTATTGTTTCTTGGGCTTTGCCGAGGCTGACAGATAGAGACAAAGTTGTACACATTATGGATCCTTCACTTGAGGGTCAGTACTCAATGAAGGATGTTATCCAGGTGGCAGCAATTGCTGCCATGTGCGTTCAACCTGAGGCAGATTACAGGCCTTTGATGGCTGATGTCGTCCAATCACTGGTCCCACTTGTTAAAACTCACCGAGCAAATTCCAAGGTTGGTAACAGTTCAAGCTTCATCGCCACCAAGTCACCTACTACACACGATTCCGGCAAAGCAAGTGTAGAAGATCATTTTGAAAGGTATATATAG | 1221 | 44.64 | MEADREYRSKERIVLVSIVALASLALASLFVALCYYIYISNKISNRLKKLKRIDHGDKVCFQNLKVATEKGLQVFTYKQLHSATGGFSKSNVVGHGGFGLVYRGVLSDGRKVAIKLMDQAGKQGEDEFTVEVELLSWLRSPYLLALLGYCTDNNHKLLVYEFMANGGLQEHLYPVSSSISVCLKLDWDTRLRIAFEAAKGLEYLHEHVSPPVIHRDFKSSNILLDTNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGKVPVDMKRPPGEAAIVSWALPRLTDRDKVVHIMDPSLEGQYSMKDVIQVAAIAAMCVQPEADYRPLMADVVQSLVPLVKTHRANSKVGNSSSFIATKSPTTHDSGKASVEDHFERYI | 406 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 10588937 | 10591220 | - | Conep12aG0153500.1 | Cone12ag1483 | 450327 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone12ag1483 | 406 | SUPERFAMILY | Protein kinase-like (PK-like) | 70 | 363 | IPR011009 | - | |
Cone12ag1483 | 406 | ProSitePatterns | Protein kinases ATP-binding region signature. | 93 | 115 | IPR017441 | GO:0005524(InterPro) | |
Cone12ag1483 | 406 | FunFam | Serine/threonine-protein kinase PBS1 | 55 | 162 | - | - | |
Cone12ag1483 | 406 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 212 | 224 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone12ag1483 | 406 | ProSiteProfiles | Protein kinase domain profile. | 87 | 367 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone12ag1483 | 406 | Gene3D | Phosphorylase Kinase; domain 1 | 48 | 162 | - | - | |
Cone12ag1483 | 406 | MobiDBLite | consensus disorder prediction | 379 | 398 | - | - | |
Cone12ag1483 | 406 | FunFam | Receptor-like serine/threonine-protein kinase ALE2 | 163 | 381 | - | - | |
Cone12ag1483 | 406 | Pfam | Protein tyrosine and serine/threonine kinase | 90 | 363 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone12ag1483 | 406 | PANTHER | OS01G0750732 PROTEIN | 21 | 392 | IPR050885 | - | |
Cone12ag1483 | 406 | Gene3D | Transferase(Phosphotransferase) domain 1 | 163 | 387 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone12ag1483 | Cone-Chr12:10588937 | Cone5ag0023 | Cone-Chr5:152332 | 2.40E-129 | dispersed | |
Cone17ag0996 | Cone-Chr17:7667225 | Cone12ag1483 | Cone-Chr12:10588937 | 1.18E-72 | dispersed | |
Cone4ag1911 | Cone-Chr4:13583060 | Cone12ag1483 | Cone-Chr12:10588937 | 3.76E-43 | dispersed | |
Cone7ag1825 | Cone-Chr7:11892211 | Cone12ag1483 | Cone-Chr12:10588937 | 5.81E-42 | dispersed | |
Cone8ag0522 | Cone-Chr8:3737160 | Cone12ag1483 | Cone-Chr12:10588937 | 2.09E-50 | transposed | |
Cone1ag0211 | Cone-Chr1:1272949 | Cone12ag1483 | Cone-Chr12:10588937 | 1.65E-27 | wgd | |
Cone12ag1483 | Cone-Chr12:10588937 | Cone5ag1654 | Cone-Chr5:11717761 | 9.87E-28 | wgd | |
Cone12ag1483 | Cone-Chr12:10588937 | Cone5ag1687 | Cone-Chr5:12001927 | 3.77E-40 | wgd | |
Cone12ag1483 | Cone-Chr12:10588937 | Cone6ag0948 | Cone-Chr6:4951049 | 2.41E-33 | wgd | |
Cone12ag1483 | Cone-Chr12:10588937 | Cone8ag1529 | Cone-Chr8:11506065 | 4.05E-265 | wgd | |
Cone12ag1483 | Cone-Chr12:10588937 | Cone8ag0086 | Cone-Chr8:449382 | 1.66E-29 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
81992 | None | None | None | None | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone12ag1483 | - | - | - | 0.0 |