Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone12ag1494 ATGGCTTCCTCCAAAGAACGTGAGAACTTTGTTTACGTCGCCAAGCTTGCTGAGCAGGCTGAGCGCTACGATGAGATGGTTGATGCAATGAAGAAGGTTGCAGAGCTTGATGTTGAATTGACAGTTGAAGAACGCAACTTGCTCTCTGTTGGGTACAAGAATGTGGTTGGTGCCAGGAGAGCCTCATGGAGGATCCTATCATCAATAGAGCAGAAGGAAGAAGGAAAAGGGAATGAAGTAAATGCAAAACGTATCAAGGAGTACAGACATAAGGTGGAGTCTGAGCTTTCAATTATCTGTGACGATATCATGAAGGTTATTGATGAACATCTAATCCCTTCAGCCTATGCTGGTGAATCAACAGTGTTTTACTATAAGATGAAAGGAGATTATTATCGATACCTTGCTGAATTTAAGGCTGGCAACGAGAAGAAAGAGTCTGCTGACCAGTCAATGAAAGCATATGAGGCTGCAACTAGCGCAGCTGAAGCAGATTTACCTCCTACACATCCTATCCGATTGGGTTTAGCTTTGAACTTCTCTGTCTTCTATTATGAAATCATGAATTCACCTGAAAGGGCCTGCCACCTCGCAAAACATGCTTTTGATGAAGCAATCTCAGAACTTGACAGCCTGAACGAGGAGTTATACAAAGATAGCACCTTAATCATGCAGCTTCTGAGGGATAACCTCACTCTGTGGACTTCTGACATCCCAGAGGGAGGAGAAGATTTGCAGAAGATCAATGGCACTGCCAAGAATGCTGGTGGGGAGGATGTTGAGTGA 786 44.02 MASSKERENFVYVAKLAEQAERYDEMVDAMKKVAELDVELTVEERNLLSVGYKNVVGARRASWRILSSIEQKEEGKGNEVNAKRIKEYRHKVESELSIICDDIMKVIDEHLIPSAYAGESTVFYYKMKGDYYRYLAEFKAGNEKKESADQSMKAYEAATSAAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKHAFDEAISELDSLNEELYKDSTLIMQLLRDNLTLWTSDIPEGGEDLQKINGTAKNAGGEDVE 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 10639339 10641140 + Conep12aG0154600.1 Cone12ag1494 450338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone12ag1494 261 PANTHER 14-3-3 PROTEIN 6 239 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Cone12ag1494 261 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
Cone12ag1494 261 FunFam 14-3-3 protein epsilon 2 248 - -
Cone12ag1494 261 PIRSF 14-3-3 1 247 IPR000308 -
Cone12ag1494 261 Pfam 14-3-3 protein 14 235 IPR023410 -
Cone12ag1494 261 SMART 1433_4 7 248 IPR023410 -
Cone12ag1494 261 Coils Coil 13 33 - -
Cone12ag1494 261 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Cone12ag1494 261 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Cone12ag1494 261 Gene3D - 1 249 IPR036815 -
Cone12ag1494 261 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Cone12ag1494 261 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Cone12ag1494 261 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Cone12ag1494 261 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Cone12ag1494 261 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Cone12ag1494 261 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag1494 Cone-Chr12:10639339 Cone19ag0905 Cone-Chr19:7049179 7.17E-121 dispersed
Cone10ag1369 Cone-Chr10:10676164 Cone12ag1494 Cone-Chr12:10639339 3.24E-158 wgd
Cone12ag1494 Cone-Chr12:10639339 Cone3ag1440 Cone-Chr3:33138335 4.41E-156 wgd
Cone12ag1494 Cone-Chr12:10639339 Cone8ag1540 Cone-Chr8:11568544 1.08E-172 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone12ag1494 K06630 - cit:102608475 455.677