Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone13ag0008 | ATGGACATAGTCGGGAAGTCTAAAGAGGACGCTTCGCTTCCGAAAGCAACTATGACTAAAATTATTAAGGAGATGTTACCACCCGATGTACGCGTTGCAAGAGATGCTCAAGATCTTTTGATTGAATGTTGTGTAGAGTTTATAAACTTAGTCTCATCAGAGTCTAATGATGTTTGTAACAGAGAAGACAAAAGAACAATTGCACCTGAGCATGTGCTCAAGGCCTTGCAGGTGCTTGGGTTTAGCAGCTATATTGAGGAAGTTTATCATGCATATGAACAGCACAAGCTTGAAACTATGGACTCATTGAGAGGGGCAAAGTGGAGCGGAGGAGCTGAGATGACTGAGGAGGAAGCCTTGGCCGAGCAACAGAGAATGTTTGCTGAGGCGCGTGCGAGAATGAATGGTGAGGGTACAACTGTTCCAAAGCAGCCAGAGCCTGACCAAAATTTACCAAGCTGA | 462 | 44.81 | MDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNDVCNREDKRTIAPEHVLKALQVLGFSSYIEEVYHAYEQHKLETMDSLRGAKWSGGAEMTEEEALAEQQRMFAEARARMNGEGTTVPKQPEPDQNLPS | 153 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 27839 | 29747 | - | Conep13aG0000800.1 | Cone13ag0008 | 450395 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone13ag0008 | 153 | MobiDBLite | consensus disorder prediction | 131 | 153 | - | - | |
Cone13ag0008 | 153 | PANTHER | PROTEIN DR1 HOMOLOG | 1 | 149 | IPR044255 | - | |
Cone13ag0008 | 153 | FunFam | Negative cofactor 2 beta | 3 | 139 | - | - | |
Cone13ag0008 | 153 | Pfam | Histone-like transcription factor (CBF/NF-Y) and archaeal histone | 11 | 76 | IPR003958 | - | |
Cone13ag0008 | 153 | SUPERFAMILY | Histone-fold | 9 | 136 | IPR009072 | GO:0046982(InterPro) | |
Cone13ag0008 | 153 | Gene3D | Histone, subunit A | 3 | 140 | IPR009072 | GO:0046982(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone13ag0008 | Cone-Chr13:27839 | Cone19ag0007 | Cone-Chr19:60280 | 2.39E-101 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
44557 | None | None | None | None | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone13ag0008 | K21751 | - | rcu:8264552 | 261.922 |