Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag0008 ATGGACATAGTCGGGAAGTCTAAAGAGGACGCTTCGCTTCCGAAAGCAACTATGACTAAAATTATTAAGGAGATGTTACCACCCGATGTACGCGTTGCAAGAGATGCTCAAGATCTTTTGATTGAATGTTGTGTAGAGTTTATAAACTTAGTCTCATCAGAGTCTAATGATGTTTGTAACAGAGAAGACAAAAGAACAATTGCACCTGAGCATGTGCTCAAGGCCTTGCAGGTGCTTGGGTTTAGCAGCTATATTGAGGAAGTTTATCATGCATATGAACAGCACAAGCTTGAAACTATGGACTCATTGAGAGGGGCAAAGTGGAGCGGAGGAGCTGAGATGACTGAGGAGGAAGCCTTGGCCGAGCAACAGAGAATGTTTGCTGAGGCGCGTGCGAGAATGAATGGTGAGGGTACAACTGTTCCAAAGCAGCCAGAGCCTGACCAAAATTTACCAAGCTGA 462 44.81 MDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNDVCNREDKRTIAPEHVLKALQVLGFSSYIEEVYHAYEQHKLETMDSLRGAKWSGGAEMTEEEALAEQQRMFAEARARMNGEGTTVPKQPEPDQNLPS 153
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 27839 29747 - Conep13aG0000800.1 Cone13ag0008 450395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag0008 153 MobiDBLite consensus disorder prediction 131 153 - -
Cone13ag0008 153 PANTHER PROTEIN DR1 HOMOLOG 1 149 IPR044255 -
Cone13ag0008 153 FunFam Negative cofactor 2 beta 3 139 - -
Cone13ag0008 153 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 11 76 IPR003958 -
Cone13ag0008 153 SUPERFAMILY Histone-fold 9 136 IPR009072 GO:0046982(InterPro)
Cone13ag0008 153 Gene3D Histone, subunit A 3 140 IPR009072 GO:0046982(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0008 Cone-Chr13:27839 Cone19ag0007 Cone-Chr19:60280 2.39E-101 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44557 None None None None Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag0008 K21751 - rcu:8264552 261.922