Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag0029 ATGGATTCTCGTTGCTTTGTTGCTATTACTGGATCTATTGCCGCCAAGCTTAGCAGATTCACCATCTTGCTTCTTTTTCTACTGTCTTTCTTCACTTTTATTCCAACTGAAGCATATGATGCGCTCGATCCAACCGGAAATATCACAATCAAATGGGATGTCATGAGCTGGACTCCAGATGGTTATGTTGCTGTTGTCACAATGTTCAACTTCCAGCAGTATCGTCACATTCAAGATCCAGGCTGGAAATTGGGCTGGACATGGGCTAAGAAGGAAGTAATCTGGAGCATGGTAGGTAGCCAAACAACAGAGCAAGGAGATTGTTCCAGATTCAAAGGAAACATCCCTCATTGCTGTAAGAAAGATCCAACAGTCGTAGATTTACTGCCCGGAACTCCGTACAACCAGCAGATTGCCAATTGCTGCAAAGGTGGGGTCATTAACTCGTGGGCCCAAGACCCATCCAATGCCGTTAGTTCCTTTCAGGTCAGTGTTGGTGCGGCGGGAACAACTAACAAAACTGTCAGACTGCCTAAAAACTTCACCCTTAAAGCCCCTGGTCCTGGATATACTTGTGGGCCGGCAAAGATTGTGAAACCAACTAGATTTGTATCGGCCGATAGTAGGAGAGTCACTCAAGCTTTGATGACATGGAATGTTACTTGCACTTATTCACAATTTCTTGCCCAAAAGACACCCACCTGTTGTGTATCGCTTTCTTCCTTCTATAATGACACAGTTGTGAACTGCCCAGTCTGTAGCTGTGGCTGTCAGAACAACATTACAGAACCCGGAAGTTGTGTGGACCCAGATTCTCCATATTTAAGGTCAGTTGTATCTGGTTCAGGAAAATCAAGCAATACACCTCTAGTTCAATGTACTAGCCATATGTGCCCCATCCGAATTCATTGGCACGTTAAGATCAATTACAAGGAGTATTGGAGGGTGAAGATTACCATCACTAATTTCAATTACAGAATGAACTACACACAGTGGAATCTTGTCGTGCAACACCCCAACTTTGATAACTTGACTCAGTTATTCAGCTTTAATTACAAGTCATTGACTCCATATGTTGGCTTAAATGATACTGCAATGCTGTGGGGAGTCAAGTTCTACAATGACTTCCTTTCACAGGCAGGCCCTCTGGGCAACGTGCAATCAGAACTCCTTTTCCGAAAGGACAAGAGTACCTTTACTTTTGACAAGGGTTGGGCTTTTCCAAGAAGAGTTTATTTCAACGGTGATAACTGTGTGATGCCACCGCCTGATGCATATCCGTGGTTACCCAATTCCGGGCCCCGGCATATCATTTCTCCTCTCAGTTTCACAATAACCGTCTTGGCATCTTTGATACTCCTCTTGGCTTTTGCTTAA 1377 44.15 MDSRCFVAITGSIAAKLSRFTILLLFLLSFFTFIPTEAYDALDPTGNITIKWDVMSWTPDGYVAVVTMFNFQQYRHIQDPGWKLGWTWAKKEVIWSMVGSQTTEQGDCSRFKGNIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVINSWAQDPSNAVSSFQVSVGAAGTTNKTVRLPKNFTLKAPGPGYTCGPAKIVKPTRFVSADSRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTVVNCPVCSCGCQNNITEPGSCVDPDSPYLRSVVSGSGKSSNTPLVQCTSHMCPIRIHWHVKINYKEYWRVKITITNFNYRMNYTQWNLVVQHPNFDNLTQLFSFNYKSLTPYVGLNDTAMLWGVKFYNDFLSQAGPLGNVQSELLFRKDKSTFTFDKGWAFPRRVYFNGDNCVMPPPDAYPWLPNSGPRHIISPLSFTITVLASLILLLAFA 458
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 179997 182847 - Conep13aG0003100.1 Cone13ag0029 450416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag0029 458 PANTHER PROTEIN COBRA 26 448 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)|GO:0046658(PANTHER)|GO:0052324(PANTHER)
Cone13ag0029 458 Pfam COBRA-like protein 62 225 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Cone13ag0029 458 PIRSF COBRA 11 458 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0029 Cone-Chr13:179997 Cone19ag0037 Cone-Chr19:253809 0 dispersed
Cone13ag0028 Cone-Chr13:177797 Cone13ag0029 Cone-Chr13:179997 5.44E-225 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag0029 - - - 0.0