Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone13ag0039 | ATGGCAATCAATTTCATATCTGTGACAATTTCCACAATCTTCTTCGCGGCAGTTCTATACTACCTCCTCCACCACCGTAACCGTAAGTACGGCCACCGTCTCCCTCTCCCTCCTGGTCCAAAACCATGGCCACTGCTTGGAAATCTACCTCACTTAGGCGCCGTGCCTCATCACTCGATTGCAGCTTTAGCTCGTGTATACGGCCCGCTCATGTATCTACGATTAGGTCTCGTCGATGTCGTCGTCGCCGCATCTGCCGCCGTCGCTGAGCAGTTTTTGAAAGTCCACGATGCGAATTTCTCGAACCGGCCGCCTAACTCCGGTGCCAAACATATCGCGTATAATTATCAGGATCTCGTTTTCGCACCGTACGGTCCACGTTGGCGGATGCTCCGGAAAATCAGCTCCGTTCATCTGTTCTCCGCCAAAGCTCTCGACGATTTCCGTAATGTCCGGCAGGAAGAAGTTGCAGTGTTAACGGGAGTGCTAGCAAATGCGGGGACGGAACCTGTGAATCTAGGGGAACTGCTAAATGTATGCACCACTAATGCCCTCGGACGCGTAATTTTAGGACGTAAAGTGTTCCGGGACGGAACAGACACCGACCTGAAAGCAGACGAGTTCAAATCAATGGTGGTGGAGCTAATGGTGTTGGCCGGGGTGTTTAACATAGGAGACTTTGTTCCCGCGCTAGAGTCTTTCGATTTACAGGGTGTGGCCCGTAAGATGAAGAAGCTCCACTTGCGTTTCGACGGTTTCTTGACCAAGATCGTGCAGGAGCACAGGAGCAGTTCTGCAGATCTTCCTCGTGGGGAGCCTTACAATGACCTATTGAGTACGTTGTTGAGGTTGCAGGATCAACCGTCCGATGACGGAGGCAAGCTTACCGACACTGAGATCAAAGCATTATTACTGAACATGTTCACGGCAGGTACGGATACGTCCTCAAGCACAGTAGAGTGGGCCATAGCTGAGCTAATCAGACACCCGAGCATCTTGGCGCAAGTCCGAGAGGAGCTTGATACTGTTGTGGGCCAAGACCGATTAGTATCCGAACCAGACTTGGCCCAACTGACCTATCTCCAAGCGGTTGTGAAAGAAACCTTCAGGCTACACCCATCAACCCCACTCTCTCTCCCTCGGATGGCGTTGGAAAGCTGCGAAATCAACGGCTACCACATCCCGAAGGGGTCAACGCTGTTGGTCAACATATGGGCTATTTCACGTGACCCGAATGAGTGGACCGATCCGCTTGAGTTTAGGCCCGAGAGGTTCTTACCGGGTGGCGAAAAGGTCGATGTTGATATTAGGGGAAATAATTTTGAGGTCATACCGTTTGGGGCTGGGAGAAGAATATGTGCTGGAATGAGTTTGGGCCTTAGAATGGTCCAGTTACTCACTGCGACCTTAGTGCATGCGTTCCGATGGGAGCTTCCAGATGGGCTAACGGCCGATAAGTTGAACATGGATGAGGGGTATGGGCTTACATTGCAACGGGCTGCTCCTTTAATGGTCCACCCACAGCCCAGGTTATCCCTACATGTTTATCGAGCGTAG | 1557 | 51.64 | MAINFISVTISTIFFAAVLYYLLHHRNRKYGHRLPLPPGPKPWPLLGNLPHLGAVPHHSIAALARVYGPLMYLRLGLVDVVVAASAAVAEQFLKVHDANFSNRPPNSGAKHIAYNYQDLVFAPYGPRWRMLRKISSVHLFSAKALDDFRNVRQEEVAVLTGVLANAGTEPVNLGELLNVCTTNALGRVILGRKVFRDGTDTDLKADEFKSMVVELMVLAGVFNIGDFVPALESFDLQGVARKMKKLHLRFDGFLTKIVQEHRSSSADLPRGEPYNDLLSTLLRLQDQPSDDGGKLTDTEIKALLLNMFTAGTDTSSSTVEWAIAELIRHPSILAQVREELDTVVGQDRLVSEPDLAQLTYLQAVVKETFRLHPSTPLSLPRMALESCEINGYHIPKGSTLLVNIWAISRDPNEWTDPLEFRPERFLPGGEKVDVDIRGNNFEVIPFGAGRRICAGMSLGLRMVQLLTATLVHAFRWELPDGLTADKLNMDEGYGLTLQRAAPLMVHPQPRLSLHVYRA | 518 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 13 | 230826 | 233535 | - | Conep13aG0004200.1 | Cone13ag0039 | 450426 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone13ag0039 | 518 | PRINTS | E-class P450 group I signature | 88 | 109 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0039 | 518 | PRINTS | E-class P450 group I signature | 299 | 316 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0039 | 518 | PRINTS | E-class P450 group I signature | 362 | 380 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0039 | 518 | PRINTS | E-class P450 group I signature | 403 | 427 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0039 | 518 | PRINTS | E-class P450 group I signature | 443 | 453 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0039 | 518 | PRINTS | E-class P450 group I signature | 64 | 83 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0039 | 518 | PRINTS | E-class P450 group I signature | 453 | 476 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0039 | 518 | PRINTS | E-class P450 group I signature | 319 | 345 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0039 | 518 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 446 | 455 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone13ag0039 | 518 | Gene3D | Cytochrome P450 | 30 | 514 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0039 | 518 | SUPERFAMILY | Cytochrome P450 | 37 | 510 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0039 | 518 | PRINTS | P450 superfamily signature | 310 | 327 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0039 | 518 | PRINTS | P450 superfamily signature | 444 | 453 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0039 | 518 | PRINTS | P450 superfamily signature | 363 | 374 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0039 | 518 | PRINTS | P450 superfamily signature | 453 | 464 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0039 | 518 | PANTHER | CYTOCHROME P450 98A9 | 7 | 517 | - | - | |
| Cone13ag0039 | 518 | Pfam | Cytochrome P450 | 37 | 487 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0039 | 518 | FunFam | Red aleurone1 | 28 | 508 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone13ag0039 | Cone-Chr13:230826 | Cone17ag0067 | Cone-Chr17:364272 | 6.11E-140 | dispersed | |
| Cone9ag1521 | Cone-Chr9:11100226 | Cone13ag0039 | Cone-Chr13:230826 | 2.73E-90 | dispersed | |
| Cone13ag0039 | Cone-Chr13:230826 | Cone13ag0040 | Cone-Chr13:235810 | 1.70E-263 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone13ag0039 | K05280 | - | vvi:100232999 | 751.895 |