Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone13ag0040 | ATGTACTCTGTACTATTCATTAGCATTGCCATATCCATAATCCTCCACCACCTTCTCAACCTTCTCCGTCGCGGCCGCCCTCTACCGCCAGGCCCTAAACCATGGCCGCTCATTGGAAACCTACCTCACCTAGGTTCAATGCCTCACCAGTCCCTAGCCGCATTGGCTCGTGTCCATGGCCCACTCATGTTCATCAAGTTAGGCTTCGTCGATGCAGTGGTGGCCACGTCAGCATCAATGGCAGCTGCGTGCTTGAAGGCTCACGACGCGAATTTCTCAAACCGGCCACCGAATTCCGGGGCAAAGCACATTGCATATAATTATCACGATCTTGTTTTTGCACCTTACGGCCCACGATGGAGGATGCTCCGAAAAATCTGTTCGGTCCATCTATTTTCCGGCAAAGCTCTTGATGATACACGACATGTCCGCCATGAAGAAGTAGCGGAGTTAACCCGAGCGTTGGCGAATGCAGGTACCAAGGCCGTGGATCTAGGACAAAAGCTGAATCTATGTAGTGCAAACATCCTCGGACGAGTGATGATAGGGCGTACAGTTTTCGGCGATGGAAGTAGTGACAAGGCAAAGGTAGAATTCAAGGAGATGGTGGTGGAATTGATGACATTAGCTGGACAGTTCAACATTAGCGACTTTGTTCCGGCAATAGAGTGGATGGATTTGCAAGGGATTGCGAGTAAGATGAAGAACGTGCACAAACGGTTCGATGCATTTTTAACAAAGATTGTGGATGATCACAAGAACAATGTTAACAGATCTGGTTCTCCTGGGGAACACAAGGACATGTTAAGTACATTGTTGTTGTTAAAGGATCAACCGTCTGATGACCGAATCAAGCTTACAGATGTTGAAATCAAAGCATTGTTGTTGAACATTTTCGCCGCGGGCACGGATACATCATCAAGCACAACAGAATGGGCGATAGCAGAACTAATCCGACACCCAAAAGTCATGGCCAAGGTCCAAGAGGAGCTCGATGCAGTCGTTGGCCGAGACCGGATTGTAAACGAACTAGACCTACCCAAACTGACCTATTTTCAAGCTGTTGTCAAGGAAACATTCCGGCTCCACCCAGCAACGCCGCTCAACCTTCCTCGGATTGCAGCCGAGAGCTGTGAAGTCAACGGGTATCACATCCCTAAGGGCTCGACGCTTTTTGTTAACATATGGGCAATTGGACGAGACCCGGAAGAATGGACCAACCCGCTTGAGTTTAGGCCCGAAAGGTTCTTACCAGGAGGTGAAAAGGCTCATGTTAATGTGTATGGGAATCATTTTGAGGTCATGCCATTTGGATCCGGACGTCGAATTTGCGCAGGAATGAATCTGGGCTATCGAATGGTCCAGTTAGTTACTGCAACCTTCGTGCATGCATTCGACTGGGAGCTCCCTAATGGGATTATGCCTGAAAAGTTGAACATGGATGAGGCGTTTGGGATATCCTTGCAACGAGCCGTGCCTTTGATGCTGCACCCACGGCCTAGGTTATCGCCACATGTGTACTAG | 1524 | 48.95 | MYSVLFISIAISIILHHLLNLLRRGRPLPPGPKPWPLIGNLPHLGSMPHQSLAALARVHGPLMFIKLGFVDAVVATSASMAAACLKAHDANFSNRPPNSGAKHIAYNYHDLVFAPYGPRWRMLRKICSVHLFSGKALDDTRHVRHEEVAELTRALANAGTKAVDLGQKLNLCSANILGRVMIGRTVFGDGSSDKAKVEFKEMVVELMTLAGQFNISDFVPAIEWMDLQGIASKMKNVHKRFDAFLTKIVDDHKNNVNRSGSPGEHKDMLSTLLLLKDQPSDDRIKLTDVEIKALLLNIFAAGTDTSSSTTEWAIAELIRHPKVMAKVQEELDAVVGRDRIVNELDLPKLTYFQAVVKETFRLHPATPLNLPRIAAESCEVNGYHIPKGSTLFVNIWAIGRDPEEWTNPLEFRPERFLPGGEKAHVNVYGNHFEVMPFGSGRRICAGMNLGYRMVQLVTATFVHAFDWELPNGIMPEKLNMDEAFGISLQRAVPLMLHPRPRLSPHVY | 507 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 13 | 235810 | 238113 | - | Conep13aG0004300.1 | Cone13ag0040 | 450427 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone13ag0040 | 507 | Gene3D | Cytochrome P450 | 22 | 503 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0040 | 507 | PRINTS | E-class P450 group I signature | 434 | 444 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0040 | 507 | PRINTS | E-class P450 group I signature | 56 | 75 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0040 | 507 | PRINTS | E-class P450 group I signature | 444 | 467 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0040 | 507 | PRINTS | E-class P450 group I signature | 394 | 418 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0040 | 507 | PRINTS | E-class P450 group I signature | 290 | 307 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0040 | 507 | PRINTS | E-class P450 group I signature | 310 | 336 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0040 | 507 | PRINTS | E-class P450 group I signature | 353 | 371 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0040 | 507 | PANTHER | CYTOCHROME P450 98A9 | 4 | 507 | - | - | |
| Cone13ag0040 | 507 | SUPERFAMILY | Cytochrome P450 | 29 | 501 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0040 | 507 | Pfam | Cytochrome P450 | 29 | 482 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0040 | 507 | PRINTS | P450 superfamily signature | 301 | 318 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0040 | 507 | PRINTS | P450 superfamily signature | 435 | 444 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0040 | 507 | PRINTS | P450 superfamily signature | 354 | 365 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0040 | 507 | FunFam | Cytochrome P-450 19 | 18 | 499 | - | - | |
| Cone13ag0040 | 507 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 437 | 446 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone13ag0040 | Cone-Chr13:235810 | Cone19ag0181 | Cone-Chr19:1147937 | 5.28E-145 | dispersed | |
| Cone19ag0182 | Cone-Chr19:1148952 | Cone13ag0040 | Cone-Chr13:235810 | 1.03E-88 | dispersed | |
| Cone8ag0371 | Cone-Chr8:2192997 | Cone13ag0040 | Cone-Chr13:235810 | 4.50E-89 | dispersed | |
| Cone13ag0039 | Cone-Chr13:230826 | Cone13ag0040 | Cone-Chr13:235810 | 1.70E-263 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone13ag0040 | K05280 | - | vvi:100263810 | 709.523 |