Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag0054 ATGGCGCTGCTTAGAAGGCTTTTCTACCGGAAGCCACCTGATAGGCTTCTTGAGATATCTGAGAGGGTCTATGTGTTTGATTCTTGCTTTTCAACGGATGTATTGGAAGAAGACAAGTTCAAGGTGTACTTGGATGGCATCGTAGCACAGCTACAAGCCTATTATCCTGATGCTTCTTTCATGGTGTTTAACTTCAAAGAGGGGGAGGTACGATGCCTTATTTCGGACATATTATCTCAGTATGACATGACGGTTATGGACTACCCTCGGCAATATGAGGGGTGCCCTGTACTGCCATTGGAGATGATCCACCACTTCCTTCGGTCAAGTGAAAGTTGGCTATCTTCTCAAGGGCCAAAAAATGTGCTATTGATGCACTGTGAAAGAGGAGGATGGCCTGTCCTTGCATTCATGCTTGCTGGTCTTCTGCTGTACCGAAAACAATACAGTGGGGAGAAAAAGACTCTTGATATGGTCTACAAGCAAGCTCCTAGGGAACTTCTCAATCTTTTTTCTCCTTTAAACCCACAGCCTTCCCAGATGAGATACCTTCAGTACATTTCTGAAAGAAACTTAGGTCCTGATTGGCCTCCATCTGATACGCCTCTGGTTTTAGATTGTCTGATACTCAGAGTCCTCCCATTGTTTGATGGGGGAAGGGGATGCAGGCCTATCGTACGTGTTTATGGTCAGGACACTTCATTGCCGGAAAATAGGAATTCAAAGCTTTTTTTTTCAAATTCAAAGACGAAAAAAGGAGTTCGCCACTATTCGCAGGCAGAGTCTCTGCTGGTAAAAATCGATATTCATTGCCGTGTTCAAGGGGATGTTGTTATTGAGTGTATCCATTTGGATGAAGATCTAATACGTGAGGAGATGATGTTCAGAGTTATGTTTCACACAGCCTTTGTACGGTCAAACATCTTGATGTTCAACCCTGATGAAATTGATATTATGTGGGATGCCAGGGACCGGTTTCCTAAGGACTTCAGATCAGAGGTGCTTTTCATGGATGCTGATGCTGCTGTGCCTGATCACGTCACAGTTGCAGCAAGTGGTGATAAAAACGAGGTGGAAATTGCATCACCTGAGGAGTATTATGAGGTGGGAGAGATATTTAGCGATGTTGTAGATATGCTGGAGCAGAAGAGGAATTCTGATACTCCAGTAATCAATGGGAATAAATCACATAGTTTAGACCATAAAATTTATTTGAAGGAAGACCCTTCTAAGCCCCAAGACTCTAATTCTGACCATGGAAATCACAAGCAGGTTGTTAAGGTGGATTGTAATGCTGATGCAGTGAAGGATATCACTGTGGATGATGTGAAGTACAGGCGGGTTAAGAGTGTGGATAGTGATCTTCATGCAATGAAAGACATTGGTGTGGATGATGGTACTATCAAAAGAAATTCCCTTCTATTTTCTCAGAACTTGGAAGAAACAGAAGATACAGGTGATGGAACGGTCACTGACATGATGAAGTTGGAATCCAAGGCTCTCCAGAAAAAGTTGACAGCTGATGGCTATAGGCAGAAATCTGAATATTTACAGTCACCAGCTTGTAGGAAACAGCTTGCATCAGCTGCAAAGCCTATTGCTGATATTTCTTTGCCCAAACAGAAGGTCAAACAACAGGAAACTCAGGGGTTTCTTGCAAAACAAGCAAAGCCAAATGCTGTATCTAGGTGGATACCTCCTAACAAAGGCTCTTATGCTAATTCAATGCATGTTTACTATCCGCCATCAAGAAATATCAATGCCTCAGCTACTCTTTCTAAGGATTCTAATGCAAATTCCAAACTAAAGACTACCTCTGGTACTACTGCTCCTGGACTTTTGGCTTTAACTGATATGGGAAGCAAACAAACAAGTCATAAAGTGAATCCTATGGAGCTCTCAGTTTCTCCAACTTCAATACCACCTCATATCAGTCTGCAATCAGAAGTGGGTCCTCCCCTTTCAAATCAACATCTACCTCCGTCATCTCCACCCCCAGCCCCACCAGTGCAAGCAATTCATAGTAGCAGCCTTTCAGCATTTTGTATTCCTCCCAACGCTTATTCATCACATTCTCTATTTGAAGCAACACCTTCCCCTCAACCATCACTTCCAACTTTCAGTAATGCGGTGTCCAAAAAAATTCCTTCATTGTCCCCATCACCACCCGCTTCCCTGTCATTACTGCCGCCTGAACCCCCTCTCACATCAAACACAATAGTCTTGGATCCTTCCTCTCCACCGGTTTCCCCTAGCAGGCACAAAAATGTGGCATCACTGCCTCCTCCACCACCACCATGGAAGTATTCGGGGTCTCCTATTGCCTCCAATTTGGGGACTAGCTCTCCAGCTACATCAACACTTGTTAAAGTAATTGCATCACCTTCCTCTCTGTCATATAGAGGTCCAAGACATCCTCCACCATCGAATCCTCTTACTTCCTTTTCTAGAGCAACATCTTCATCTCCAGCACCCTCAGCTCCTGTATGCAGAACCCCACCACCACCTCCACCACCACTGCCTCCTATTCATGGAAGGAAACCAGCACTGCTGCCTCTTATTCTGCAAGCACCAATTCTGCCACCGCCGTCTCTTCTTCAGGAAGCACCTCCTACACCACCACCACCACCTCCTATTCATGGAGGGAAACCATCTCTCCCTCCACCACCATCACCCCCTCATGGAGTGCCAACACCCCCCTCACCTCCAATTCGTTGTGCACCACCTCCTCCACCTCCTATTGGTGGAGGCCTATCACCTCCTTTGCTTGGAGCTTGTGTTCCTGGGCCTCCTATACCTCCTGGGGGTGCATCTCCTCCTCCTCTACCCTTTGGTGCCAAAGTTGGTGCTCCTCCTCCTCCTCCACCCCTGGGTTCCAAAGGTGGTGCGCCTCCACCTCCTGCACCTGGATTATCAGCAGGAAGAGGGCGTGTTCCATCACGTCCTTCAGGCATTGGCTCAGCTACAACACCTCAAAGATATTCCTTAAAGCCTCTTCATTGGAGCAAGGTGACAAGAGTGCTTCAAGGGAGCTTGTGGGAAGAATTACAACAAGTTGGAGAGCCTCAAATTGCGTCAGATTTTGATGTATCTGAGCTAGAGTCCCTTTTCTCTGCTTCTGTCCCAAAAGCTGCTGATGTTGGAGGTAAATCTGGTGCGCGTCATAAGTCTTCTGGATCTAAAACTGACAAAATCCAACTGATTGACCTGAGGAGGGCATATAACACTGAAATTATGCTCACAAAAGTAAAGATGCCACTTGCGGATATGATGACTGCAATATTAGCAATGGATGAGTCAGTATTAGATGTTGATCAGGTGGAAAACCTTTCAAAGTTTTGTCCTACTAAGGAGGAGATGGAGCTTCTCAAGGGATACACTGGCAACAAAGATGACCTTGGAAAGTGCGAAAAGTATTTTATGGAGCTGATGAAAGTGCCTCGTGTAGAGTCAAAGTTAAGAGTGTTTTCCTTCAAGATTCAATTTCGTTTGCAGATTTCAGAATTTAGAAAGAGCTTAAACACTCTAAACTCAGCATGTGAAGAGGTGAGAAATTCTATGAAGCTGAAGGAAGTCATGAAGAAAATTCTTTATCTGGGGAATACATTGAACCAAGGAACTGCAAGGGGTTCTGCACTTGGCTTTAAGTTGGATAGTCTTTTGAAGCTCACTGATACACGTGCTTCGAACAGTAAGATGACACTCATGCATTACCTTTGCAAGGTACTTGCTTCCAAGTCACCGGCTCTTCTTGATTTTTATTTGGATCTTGGTAGCCTGGAAGCTGCCTCTAGGATACAATTGAAGTCTGTAGCAGAAGAAATGCAAGCGATAATTAAGGGATTAGAAAAGGTTAGACAGGAGCTTGTTTCATCGGAAAGCGATGGCCCTGTCTCTGAACTTTTCTGTAAGACATTGAAAGAATTCACTGGTATTGCTGAGACAGAGGTGGCTTCTGTGACCAACCTTTATTCTGTGGCGGGTAGAAATGCAGATGCACTTGCTCTGTACTTTGGAGAGGATCCTGCCCGTTGCCCATTTGAGCAGGTTGCTGTGACGCTAATAAATTTTGTGAGGATGTTCCGAAGAGCGCATGAAGAGAACATCAAACAGGCTGAATTGGAAAAGAAGAAAGCTGAGAAGGAGGCTGAAATGGAGAAGGCTAAGGCCTCCACTTCACAAAGAAAAGTGTGA 4194 44.92 MALLRRLFYRKPPDRLLEISERVYVFDSCFSTDVLEEDKFKVYLDGIVAQLQAYYPDASFMVFNFKEGEVRCLISDILSQYDMTVMDYPRQYEGCPVLPLEMIHHFLRSSESWLSSQGPKNVLLMHCERGGWPVLAFMLAGLLLYRKQYSGEKKTLDMVYKQAPRELLNLFSPLNPQPSQMRYLQYISERNLGPDWPPSDTPLVLDCLILRVLPLFDGGRGCRPIVRVYGQDTSLPENRNSKLFFSNSKTKKGVRHYSQAESLLVKIDIHCRVQGDVVIECIHLDEDLIREEMMFRVMFHTAFVRSNILMFNPDEIDIMWDARDRFPKDFRSEVLFMDADAAVPDHVTVAASGDKNEVEIASPEEYYEVGEIFSDVVDMLEQKRNSDTPVINGNKSHSLDHKIYLKEDPSKPQDSNSDHGNHKQVVKVDCNADAVKDITVDDVKYRRVKSVDSDLHAMKDIGVDDGTIKRNSLLFSQNLEETEDTGDGTVTDMMKLESKALQKKLTADGYRQKSEYLQSPACRKQLASAAKPIADISLPKQKVKQQETQGFLAKQAKPNAVSRWIPPNKGSYANSMHVYYPPSRNINASATLSKDSNANSKLKTTSGTTAPGLLALTDMGSKQTSHKVNPMELSVSPTSIPPHISLQSEVGPPLSNQHLPPSSPPPAPPVQAIHSSSLSAFCIPPNAYSSHSLFEATPSPQPSLPTFSNAVSKKIPSLSPSPPASLSLLPPEPPLTSNTIVLDPSSPPVSPSRHKNVASLPPPPPPWKYSGSPIASNLGTSSPATSTLVKVIASPSSLSYRGPRHPPPSNPLTSFSRATSSSPAPSAPVCRTPPPPPPPLPPIHGRKPALLPLILQAPILPPPSLLQEAPPTPPPPPPIHGGKPSLPPPPSPPHGVPTPPSPPIRCAPPPPPPIGGGLSPPLLGACVPGPPIPPGGASPPPLPFGAKVGAPPPPPPLGSKGGAPPPPAPGLSAGRGRVPSRPSGIGSATTPQRYSLKPLHWSKVTRVLQGSLWEELQQVGEPQIASDFDVSELESLFSASVPKAADVGGKSGARHKSSGSKTDKIQLIDLRRAYNTEIMLTKVKMPLADMMTAILAMDESVLDVDQVENLSKFCPTKEEMELLKGYTGNKDDLGKCEKYFMELMKVPRVESKLRVFSFKIQFRLQISEFRKSLNTLNSACEEVRNSMKLKEVMKKILYLGNTLNQGTARGSALGFKLDSLLKLTDTRASNSKMTLMHYLCKVLASKSPALLDFYLDLGSLEAASRIQLKSVAEEMQAIIKGLEKVRQELVSSESDGPVSELFCKTLKEFTGIAETEVASVTNLYSVAGRNADALALYFGEDPARCPFEQVAVTLINFVRMFRRAHEENIKQAELEKKKAEKEAEMEKAKASTSQRKV 1397
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 337662 346269 + Conep13aG0005700.1 Cone13ag0054 450441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag0054 1397 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 336 IPR035892 -
Cone13ag0054 1397 Gene3D Formin, FH2 domain 1005 1397 IPR042201 -
Cone13ag0054 1397 MobiDBLite consensus disorder prediction 797 849 - -
Cone13ag0054 1397 MobiDBLite consensus disorder prediction 1375 1397 - -
Cone13ag0054 1397 MobiDBLite consensus disorder prediction 731 753 - -
Cone13ag0054 1397 SMART it6_source 985 1397 IPR015425 -
Cone13ag0054 1397 PANTHER FORMIN-J 887 1387 IPR051144 -
Cone13ag0054 1397 MobiDBLite consensus disorder prediction 694 765 - -
Cone13ag0054 1397 MobiDBLite consensus disorder prediction 590 656 - -
Cone13ag0054 1397 ProSiteProfiles Formin homology-2 (FH2) domain profile. 986 1387 IPR015425 -
Cone13ag0054 1397 MobiDBLite consensus disorder prediction 590 671 - -
Cone13ag0054 1397 SMART PTEN_C2_2 198 338 IPR014020 -
Cone13ag0054 1397 MobiDBLite consensus disorder prediction 694 722 - -
Cone13ag0054 1397 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 15 187 IPR029021 -
Cone13ag0054 1397 Pfam Formin Homology 2 Domain 990 1361 IPR015425 -
Cone13ag0054 1397 Pfam C2 domain of PTEN tumour-suppressor protein 199 337 IPR014020 -
Cone13ag0054 1397 Gene3D Protein tyrosine phosphatase superfamily 14 204 IPR029021 -
Cone13ag0054 1397 MobiDBLite consensus disorder prediction 827 846 - -
Cone13ag0054 1397 SUPERFAMILY Formin homology 2 domain (FH2 domain) 951 1381 - -
Cone13ag0054 1397 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Cone13ag0054 1397 Gene3D - 205 336 - -
Cone13ag0054 1397 Coils Coil 1362 1396 - -
Cone13ag0054 1397 MobiDBLite consensus disorder prediction 657 671 - -
Cone13ag0054 1397 MobiDBLite consensus disorder prediction 811 826 - -
Cone13ag0054 1397 MobiDBLite consensus disorder prediction 861 992 - -
Cone13ag0054 1397 MobiDBLite consensus disorder prediction 861 972 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0054 Cone-Chr13:337662 Cone17ag0984 Cone-Chr17:7577492 3.94E-287 dispersed
Cone13ag0054 Cone-Chr13:337662 Cone16ag0189 Cone-Chr16:1212438 0 wgd
Cone13ag0054 Cone-Chr13:337662 Cone2ag0827 Cone-Chr2:34275656 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag0054 K28090 - csv:101215105 829.32