Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag0055 ATGCTCTCCAAGCTCCGTCATCGCCACCTCATCTCTCTCATTGGTTTTTGCGACGAACAATCCGAAATGATCCTTGTCTATGAATACATGTCTAACGGACCGCTTCGTGACCATTTATATGGTTCAAGCTTTCCTCCATTATCATGGAAACAAAAGCTAATTGGAGCAGCTCGAGGACTCCCCTATCTTCATACGGGTGCGACCCAGGGCATAATCCACCGTAACGTGAAAACAACAAACATACTTTTAGATGAGTATTTCGTGGCCAAAGTTTCCGATTTCGGTCTTTCAAAAACTGGACCGTCTATAGAGCAAACTCATGTAAGTACAGCAGTTAAAGGAAGTTTTGGTTATCTTGATCTCGAGTACTTTAGAAAACAGCAGTTAACCGAAAAATCTGACGTGTACTCATTTGGGGTTGTGCTTTTCGAAGTGTTGTGTGCAAGGCAAGTTATAAACCCCGCATTGCACAGAGAGCAAGTGAACTTGGCTGAGGGGTGCTTGAGAACCTTATTGACCCGTGTGGGGTCGTTGAGTAAAGAGTCTTTGAGTAAGTATGTGGAAGAGGCCGAGAAATGTTTGGCTGAGTATGGAGTTGATAGGCCCAGGAAGGGAGATGTGTTATGGAACTTGGAGTGTGCTTTACAGCTTCAAGAGTCTGGGTTAGGGAATGGTGATACTGGGTTGGAAGAGAAGAGTGGTGGTAAGGTTAAGAAGAAGAATGAGAATGATGAAGAAGATGAAACAGTAAGTATTATAGGTTGTGACGGCGGCAGTAGGTTGAATTCTGGTGCTGGTGTGAGTGATGATTCTGCAATCGGTTCTCCTTTATTTTCTAAGCTTGAGAATTTTCAAGGAAGGTAA 864 43.63 MLSKLRHRHLISLIGFCDEQSEMILVYEYMSNGPLRDHLYGSSFPPLSWKQKLIGAARGLPYLHTGATQGIIHRNVKTTNILLDEYFVAKVSDFGLSKTGPSIEQTHVSTAVKGSFGYLDLEYFRKQQLTEKSDVYSFGVVLFEVLCARQVINPALHREQVNLAEGCLRTLLTRVGSLSKESLSKYVEEAEKCLAEYGVDRPRKGDVLWNLECALQLQESGLGNGDTGLEEKSGGKVKKKNENDEEDETVSIIGCDGGSRLNSGAGVSDDSAIGSPLFSKLENFQGR 287
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 346670 347558 - Conep13aG0005800.1 Cone13ag0055 450442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag0055 287 MobiDBLite consensus disorder prediction 224 287 - -
Cone13ag0055 287 Gene3D Phosphorylase Kinase; domain 1 1 30 - -
Cone13ag0055 287 ProSiteProfiles Protein kinase domain profile. 1 215 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone13ag0055 287 PANTHER OS07G0166700 PROTEIN 1 219 IPR045272 GO:0004672(PANTHER)|GO:0004714(InterPro)|GO:0005886(PANTHER)|GO:0006468(InterPro)|GO:0009506(PANTHER)|GO:0046777(PANTHER)
Cone13ag0055 287 Gene3D Transferase(Phosphotransferase) domain 1 31 226 - -
Cone13ag0055 287 Pfam Protein tyrosine and serine/threonine kinase 1 158 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone13ag0055 287 SUPERFAMILY Protein kinase-like (PK-like) 2 211 IPR011009 -
Cone13ag0055 287 MobiDBLite consensus disorder prediction 231 247 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0055 Cone-Chr13:346670 Cone6ag0119 Cone-Chr6:572346 8.25E-110 dispersed
Cone13ag0055 Cone-Chr13:346670 Cone19ag0058 Cone-Chr19:370210 3.18E-158 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81997 PF13855 LRR_8 1.50E-07 CL0022 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag0055 - - - 0.0