Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag0094 ATGGGGCATAAGAAGAAAAATTTTGCTCCGCCCTCAAAACAATCTCCGGTGGCGGCTGAAGGGGTTGCGCGTGGTGTCGCCGGCGATGGTTCAAGTGTGGCGCAATCTGACTGCTCCTCGAAACCTAGTGATAGTAACAGTAATCATCATCCCGTTCAGAACCAAGCCAATAATAAGATCGAGCCGTTGATTAGAAATGAATCGGACGGCGGATCATCTTACTCCACAATCAAGCTCGAATGTGAACGGGCTCTCACAGCGCTTCGACGTGGGAACCACACAAAGGCACTGAGGCTTATGAAGGAGTTATGCTCTAAGAATGAGAACTCAGCTCACTCGGCATTGATTTATCGTGTTCAAGGTACTGTATGTGTTAAAGTGGCGTCGATTATTGACGATCCAAATGCTAAGCAGAGGCATTTGAGAAACGCTATTGAGTCGGCTCATAAAGCCGTTGATCTTTCTCCAAACTCGATTGAATTTGCTCATTTCTATGCTAATTTGCTCTACGAGGCTGCTAATGATGGGAGGGAGTATGAAGAGGTGCTGCAAGAGTGTGAACGGGCTCTAGCAATTGAAAACCCAATCGATCCTGCAAAGGAGAGTTTGCAGGATGAAAGGCAGCAGAAGATACCTAATTCTGAAGCGAGAATAGCTCATGTGAAGAATGAATTGCAGCAGCTGGTTCAGAAGTCTAACATTTCTTCACTATCGTCTTGGATGAAGAATTTTGGATCTGGGCAGGAGAAGTTTAGGTTGATTCCGATAAGGAGGGTGACAGAGGACCCAATGGAGATGAGGACAGTTCAAACTAGGCGGCCAAATGAGATTAAGAAGGCCACCAAGACGCCTGAAGAACGGAGGAAGGAGGTTGAAGTCCGTGTTGCTGCTGCGAGGCTTTTGCAGCAAAAGTCAGAGACTCCACAATTACAGAATGATGGGAATAAGACAGAGAGGGGGCTGGATTCTTCGTCTTCAGGTTCTGGCTTGAGAGGAGGTGAGAGGCGGAGAAATGGAAGGAAACACGGGTCTTCAGCAGAGAGGAGGGATTGGGTTCGGCCGTATTGGAATTCTATGAGTATTGATTCGAAGAAAGAGTTGCTTAGGATTAAGATAACTGATCTTAAGGCTCATTTTAATGCATCTAAAGATGGTTCGGCAGATGGAGTTTTATCGGAAGCTTTGTCGTTTTGTGAGGTGAATAAAACATGGAACTTCTGGGTATGCTGCAGATGTAATGAGAAATTTTCAGATTCAGAATCTCATATGCACCATGTAGTGCAGGAGCATATGGAGAACCTTTTGCCAAAAATGCAGTCAATTTTGCCACAGAATGTGGATAATGAATGGATTGAGATGCTTCTCAACTGCTCTTGGAAACCAGTAGATGTCATTGCTGCTGTTAAAATGCTCACAAATCGATCAAATTGCAGAGATTCTGAGTTTTCTGAGGATATCTATTCTGTCAATCATAATGAGGGGTTTGGTGACTGCTTCAAAGATGCATGGGATTCTTCACCCGACAGGGGAGATTTGGAAAATAGTTGCAATAGTTTTACTGTTAAAAGTAATAGCCAGAAAGAAAGTACTGACATTGAGTGTAGAATTTGTCATGAAGATCAGGGTTCAACATCTTATTCACTAATTGATAACTGGCCAATATCTGATGACTCTGAGCGGGAGAAGCTTCTTGAAAGAATACATGCAGTATTTGAGTTGCTTATTAGGCATAAATATCTTGCTGCAAGCCATCTGAACAAGGTTATACAATTTACAATGGATGAGTTACAGGGTGTTGCATCTGGTTCTCGGCTTCTAAACAATGGTCTGGACCAAACCCCACTTTGTATCTGCTTTCTGGGAGCTTCCCAGCTCAGGAAAGTCCTCAAATTCTTGCAAGAATTATCTCATTCTTGTGGTTTGGGTAGATATTCTGATAAAAATAGCAGTCCCATGGATGATGCAAATAGCAGCACTCAAGTTTTGGAGATGAAAGAAAAGATTGTTCTTAATGGGGATGCCTCATTTCTCTTTCTGGATGAAAGTTTTTTGTCAACTAAACGTACTTCTGCAGATGGTTTTGACGCAGCTTCTTCTGCCAAAGTTGTTCAGGCAAATGGGGTTCCACCTGAAGGTGATGTTTCATTATCCTGGATATTTGCAGGTCTGTCAAGTGGGGAACAATTGGTATCATGGATGCAAACAAACGAAGAAAAAACACAAGAAGGAATAGAAATTCTCCAAATGCTAGAGAAGGAGTTCAACCACCTACAGAGCCTATGTGAGCGGAAATGTGAGCATTTAAGCTATGAGGAAGCATTGGAGGCTGTGGAGGATCTCTGCCTTGAACAAGGTAAGAAAAGGGAAAATAGGACAGAATTTGTCAATCAAAGCTACGAGTCTATCCTAAGGAAGCGAAGGGACGAACTTATTGAAGCGGAAAATGATGCCATGTTTCTCAGCAGCAGGTTTGTGTTAGATGCTATAAACAATGTTTTGAAAGAAGCAGAAGCCCTGAACATCAACCAAATTCGATACGAGGATAATTATAATGGGGTGACTTCACAATTATGTGACTTGGAATCTGGTTTAGATGAGGATTGGAGAGCCAAGGACTATTTGCATCAAGTTGATACATGTATAGAAGTTGCAATTCAGAGGCAGAAAGAACAGTTAGCTGTTGATATTAGCAAAATTGATGCACGCATCATGCATAATGTTACTGGAATGCAGCAGTTGGAACTTAAGCTTGATCCTGTCTCTGCCCATGATTATCAGTCAATATTATTGCCTCTTCTGAAGTCATACTTGAGGGCACATTTGGAGGATTTGGCTGAGAAAGATGCCAAGGAGAGGTCTGATGCTGCAAGAGAGGCGTTTTTAGCAGAACTTGCTCTGGATTCAAAGAAGGCCATCAAAGGAGAAAGTGGTAATTCAAAACATTCTCAGCAAAAGACGAAGGACAAGAAAAAGAACAAGGAGTTTAGGAAAAGCAAAGATTTGAAGGCTAATGGCAGTGTCGAGCGGGATATACCTCAACATGAGACTCTTGAGGAAGAATTGTCCCCGGTTACACCTGATGGTGACCATCAAGGTTCAGATATTACTGTTTCTGAGAATGGGGATGACTTAAAACTACTGGAAGGAGAATTTAGACGCAAAATTGAGCTTGAAGATGAGGAAAGAAAGCTTGAAGAGACTTTGGAATATCAGAGAAGAATCGAGAATGAGGCTAAACAAAAGCACCTTGCCGAGCAACAAAAGAAATCTGCTCTGATACATCTGGAGAAGGTAGCAGTGGGACAGCATGATATTTGCTTGGGGCCTGTTGCTGGTAATGAAAATATGATCAAGCAGTTCAAACCTTCTGTGTTGGAAGAAAACAATGCATCTCCAAACAATTTGGAAGGCTTGACTCTAAATGGTTATGCAGTGCTTGCTGTTCCTGATATGCAAAATTTTGGTATGCCCAATGAAGGTATTCCAGAGAATACTCTGCCATCTTCTGAACGACGAACAGGAAGGAGAAGTAGGCGGCATAAAGGTTCTACTAAATTGCTTGGGGGAAAGCATCAGGTCGTGTCATCTGATATGGAGAATACAGAAGTTGGGACACAGTTCGATGGCCATTCAAAAGAGAAAGGCTCTAGCACTGACATCATTTTATATAATGGCAGTGCTGTTGTGGGAGACAATAATACGAAGTTGCAGAAACAATCAGAAGCAGTGGAGGATGATGAGGAAAGGTTCCAAGCTGATCTTAAGAGAGCTGTGCGCCAAAGCCTTGCCACATTCGAAGCACAAAAGAAGTTTCCCTTGGTTTCAAGTTCGAGGGCACCACGGACAAGCTCAGCTGAAGTGGAGCATAACAACGGTATTTTATCAGATGAAGTTGGTGTAGAAAGTATTCAGGGAGCAGATGTATTTGGCTCTGGGCTGAAGAATGAAGTTGGTGAATACAATTGCTTTCTTAATGTCATTATTCAGTCGTTATGGCATTTAAAACTGTTTCAAGATGAGTTCCTGAAAAGATCTACATCTGAGCATGTTCACATTGGTGATCCATGCGTTGTCTGTGCATTGTACAAAGTCTTTGCTGCCCTGACCATTGCATCTACAGATACACGAAAAGAACCAGTTGCCCCTGCTTGTCTGAGAATAGCCTTAAGCAACCTTTATCCTCTTAGTAATTTCTTCCAGGAGGGTCAGATGAATGATGCGTCCGAAGTTCTAGCAGTGATATTTGACTGCCTTCACCAGTCATTTGCTTCTAGTTCAAGTGTTTCTGATGCTGATTCTGTTGAAAGCGACAGTATAGGGTCTTCTGATTGTGCAAATGATGCTTGTATAGTTCATTCCATTTTCGGAATGGACATCTTTGAACGAATGAATTGCTACAGCTGTGGTCTAGAGTCCAGGCATCTAAAGTACACTTCCTTTTTCCACAATATAAATGCTAGTGCGCTCCGAGCAACAAAGGTTATGTGTGCAGAGAGCTCATTTGACGAGCTTTTGAATGTTGTGGAAATGAATCATCAGTTGGCTTGTGATCCAGAAGTTGGTGGCTGTGGAAAGCCCAACTACATCCATCACTTTCTTGCAGCTCCGCCACATGTCATCACAACAGTTGTGGGGTGGCAGAATACATGTGAGAGTGCTGATGATATAGCAGCAACATTGGCTGCTCTAAATGCTGAGATTGATATTAGTGTTCTTTATCGTGGTCTGGATCCGAAGAGTATGTACACTTTGGTATCAGTGGTTTGCTACTATGGACAACATTATCATTGTTTTGCCTACAGTCATGAGCATGAATGTTGGGTTATGTATGATGATAAAACTGTGAAGGTAATCGGAGGGTGGAATGATGTTCTTTCTACGTGCAAAAGGGGCCATTTGCAACCCCAGGTTCTGTTCTATGAAGCTATAAACTAG 4935 42.51 MGHKKKNFAPPSKQSPVAAEGVARGVAGDGSSVAQSDCSSKPSDSNSNHHPVQNQANNKIEPLIRNESDGGSSYSTIKLECERALTALRRGNHTKALRLMKELCSKNENSAHSALIYRVQGTVCVKVASIIDDPNAKQRHLRNAIESAHKAVDLSPNSIEFAHFYANLLYEAANDGREYEEVLQECERALAIENPIDPAKESLQDERQQKIPNSEARIAHVKNELQQLVQKSNISSLSSWMKNFGSGQEKFRLIPIRRVTEDPMEMRTVQTRRPNEIKKATKTPEERRKEVEVRVAAARLLQQKSETPQLQNDGNKTERGLDSSSSGSGLRGGERRRNGRKHGSSAERRDWVRPYWNSMSIDSKKELLRIKITDLKAHFNASKDGSADGVLSEALSFCEVNKTWNFWVCCRCNEKFSDSESHMHHVVQEHMENLLPKMQSILPQNVDNEWIEMLLNCSWKPVDVIAAVKMLTNRSNCRDSEFSEDIYSVNHNEGFGDCFKDAWDSSPDRGDLENSCNSFTVKSNSQKESTDIECRICHEDQGSTSYSLIDNWPISDDSEREKLLERIHAVFELLIRHKYLAASHLNKVIQFTMDELQGVASGSRLLNNGLDQTPLCICFLGASQLRKVLKFLQELSHSCGLGRYSDKNSSPMDDANSSTQVLEMKEKIVLNGDASFLFLDESFLSTKRTSADGFDAASSAKVVQANGVPPEGDVSLSWIFAGLSSGEQLVSWMQTNEEKTQEGIEILQMLEKEFNHLQSLCERKCEHLSYEEALEAVEDLCLEQGKKRENRTEFVNQSYESILRKRRDELIEAENDAMFLSSRFVLDAINNVLKEAEALNINQIRYEDNYNGVTSQLCDLESGLDEDWRAKDYLHQVDTCIEVAIQRQKEQLAVDISKIDARIMHNVTGMQQLELKLDPVSAHDYQSILLPLLKSYLRAHLEDLAEKDAKERSDAAREAFLAELALDSKKAIKGESGNSKHSQQKTKDKKKNKEFRKSKDLKANGSVERDIPQHETLEEELSPVTPDGDHQGSDITVSENGDDLKLLEGEFRRKIELEDEERKLEETLEYQRRIENEAKQKHLAEQQKKSALIHLEKVAVGQHDICLGPVAGNENMIKQFKPSVLEENNASPNNLEGLTLNGYAVLAVPDMQNFGMPNEGIPENTLPSSERRTGRRSRRHKGSTKLLGGKHQVVSSDMENTEVGTQFDGHSKEKGSSTDIILYNGSAVVGDNNTKLQKQSEAVEDDEERFQADLKRAVRQSLATFEAQKKFPLVSSSRAPRTSSAEVEHNNGILSDEVGVESIQGADVFGSGLKNEVGEYNCFLNVIIQSLWHLKLFQDEFLKRSTSEHVHIGDPCVVCALYKVFAALTIASTDTRKEPVAPACLRIALSNLYPLSNFFQEGQMNDASEVLAVIFDCLHQSFASSSSVSDADSVESDSIGSSDCANDACIVHSIFGMDIFERMNCYSCGLESRHLKYTSFFHNINASALRATKVMCAESSFDELLNVVEMNHQLACDPEVGGCGKPNYIHHFLAAPPHVITTVVGWQNTCESADDIAATLAALNAEIDISVLYRGLDPKSMYTLVSVVCYYGQHYHCFAYSHEHECWVMYDDKTVKVIGGWNDVLSTCKRGHLQPQVLFYEAIN 1644
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 574824 583002 + Conep13aG0009900.1 Cone13ag0094 450481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag0094 1644 Coils Coil 211 231 - -
Cone13ag0094 1644 MobiDBLite consensus disorder prediction 267 295 - -
Cone13ag0094 1644 Pfam Ubiquitin carboxyl-terminal hydrolase 1312 1640 IPR001394 GO:0004843(InterPro)|GO:0016579(InterPro)
Cone13ag0094 1644 Coils Coil 1233 1253 - -
Cone13ag0094 1644 MobiDBLite consensus disorder prediction 302 331 - -
Cone13ag0094 1644 Pfam Protein of unknown function (DUF627) 84 194 IPR006866 -
Cone13ag0094 1644 SUPERFAMILY Cysteine proteinases 1312 1641 IPR038765 -
Cone13ag0094 1644 Gene3D Cysteine proteinases 1307 1644 - -
Cone13ag0094 1644 MobiDBLite consensus disorder prediction 1157 1189 - -
Cone13ag0094 1644 MobiDBLite consensus disorder prediction 32 72 - -
Cone13ag0094 1644 Coils Coil 796 816 - -
Cone13ag0094 1644 Gene3D Tetratricopeptide repeat domain 73 227 IPR011990 GO:0005515(InterPro)
Cone13ag0094 1644 ProSitePatterns Zinc finger C2H2 type domain signature. 409 430 IPR013087 -
Cone13ag0094 1644 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 1311 1643 IPR028889 -
Cone13ag0094 1644 MobiDBLite consensus disorder prediction 267 347 - -
Cone13ag0094 1644 MobiDBLite consensus disorder prediction 972 1038 - -
Cone13ag0094 1644 MobiDBLite consensus disorder prediction 993 1025 - -
Cone13ag0094 1644 Coils Coil 1047 1077 - -
Cone13ag0094 1644 SUPERFAMILY TPR-like 81 199 IPR011990 GO:0005515(InterPro)
Cone13ag0094 1644 CDD Peptidase_C19 1403 1641 - -
Cone13ag0094 1644 PANTHER UBIQUITIN SPECIFIC PROTEINASE 1 1642 IPR052398 -
Cone13ag0094 1644 MobiDBLite consensus disorder prediction 1 72 - -
Cone13ag0094 1644 Pfam Protein of unknown function (DUF629) 352 883 IPR006865 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0094 Cone-Chr13:574824 Cone19ag0097 Cone-Chr19:545745 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag0094 - - - 0.0