Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag0121 ATGGCTTGCACGGTTCCTCTCGTCCTCCTCATCTTAATCTTCCTTTATGTTCCATTCTCTGCGGAATCAAAACTCACCCTTGATTATTACATGAAAACATGTCCTGATTTCGAAAAGATCATCCGTGATACAGTCACCGGAAAACAAATGACAAGCCCAACAACTGCAGCCGGAACTCTCCGTGTCTTCTTCCATGATTGTATGGTGGACGGTTGCGATGCATCCGTCCTTATCTCTGCTAATTCCTTCCATCAGGCAGAACGTGAATCCGATATAAACCTCTCACTCCCCGGCGATGCCTTTGACCTTATTGTTCGAGCTAAAACTCAATTAGAACTGACATGTCCCGGCATCGTCTCTTGCTCGGATATCTTAGCACAAGCTACAAGAGACCTTGTAACAATGGTTGGTGGCCCATTTTACAATATTCGATTAGGTCGTAAAGATAGTTTCATATCACAAGTTTCGCATGTTGAAGGAAATTTGCCGAGAGCAAACCAATCTCTAGATGTAATGATAAATATGTTTGGTGCAAAAGGATTTAGCATTAAAGAAATGGTTGCTTTATCCGGCAGTCATACAATCGGCTTCTCTCACTGCAAAGAGTTCGCAGATCGTTTGTTTAAATATAACAAAACGACACCAACCGATCCCGAGATCTATCCCAAATTCGCCGAAGCATTGAAAAAGATGTGTGCTAATTATACGATCGACCCCGCAATGTCGGCTTTCAACGACGTTATGACACCAGGAAAATTTGATAACATGTATTTTCTGAATCTAAAGAGAGGGTTAGGGCTTTTGCCGTCGGATCATGTGCTGGTGAAGGACCCTAGAACGAAACCATTTGTCGATCTATATGCGAATGATCAAGGGATGTTCTTTAGGGACTTTGCTCATGCAATGGAGAAGCTAAGCGTTCTTGGTGTGAAAACAGGTAGAAAAGGAGAGGTGAGGAAGAAGTGTGATGTGTTTAATAATCTTAAGACAAGCAAACCCTAA 1002 42.42 MACTVPLVLLILIFLYVPFSAESKLTLDYYMKTCPDFEKIIRDTVTGKQMTSPTTAAGTLRVFFHDCMVDGCDASVLISANSFHQAERESDINLSLPGDAFDLIVRAKTQLELTCPGIVSCSDILAQATRDLVTMVGGPFYNIRLGRKDSFISQVSHVEGNLPRANQSLDVMINMFGAKGFSIKEMVALSGSHTIGFSHCKEFADRLFKYNKTTPTDPEIYPKFAEALKKMCANYTIDPAMSAFNDVMTPGKFDNMYFLNLKRGLGLLPSDHVLVKDPRTKPFVDLYANDQGMFFRDFAHAMEKLSVLGVKTGRKGEVRKKCDVFNNLKTSKP 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 713201 714202 - Conep13aG0012600.1 Cone13ag0121 450508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag0121 333 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone13ag0121 333 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone13ag0121 333 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone13ag0121 333 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone13ag0121 333 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone13ag0121 333 FunFam Peroxidase 28 173 - -
Cone13ag0121 333 ProSiteProfiles Plant heme peroxidase family profile. 24 326 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone13ag0121 333 FunFam Peroxidase 163 305 - -
Cone13ag0121 333 CDD secretory_peroxidase 24 325 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cone13ag0121 333 Gene3D Peroxidase, domain 2 163 305 - -
Cone13ag0121 333 PANTHER - 11 326 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone13ag0121 333 Gene3D - 28 326 - -
Cone13ag0121 333 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone13ag0121 333 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone13ag0121 333 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone13ag0121 333 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone13ag0121 333 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone13ag0121 333 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone13ag0121 333 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone13ag0121 333 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone13ag0121 333 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone13ag0121 333 SUPERFAMILY Heme-dependent peroxidases 25 326 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone13ag0121 333 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601(InterPro)
Cone13ag0121 333 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Cone13ag0121 333 Pfam Peroxidase 42 290 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0121 Cone-Chr13:713201 Cone16ag0901 Cone-Chr16:9346509 1.75E-135 dispersed
Cone9ag1617 Cone-Chr9:11540097 Cone13ag0121 Cone-Chr13:713201 9.54E-20 dispersed
Cone6ag0977 Cone-Chr6:5315290 Cone13ag0121 Cone-Chr13:713201 1.43E-77 transposed
Cone13ag0121 Cone-Chr13:713201 Cone16ag0126 Cone-Chr16:712587 1.19E-168 wgd
Cone13ag0121 Cone-Chr13:713201 Cone18ag1350 Cone-Chr18:9296925 7.25E-54 wgd
Cone13ag0121 Cone-Chr13:713201 Cone19ag0123 Cone-Chr19:688592 1.35E-216 wgd
Cone13ag0121 Cone-Chr13:713201 Cone2ag0883 Cone-Chr2:34735984 2.00E-92 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag0121 K00430 - mdm:103431181 495.738