Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag0122 ATGTTCGTAAACAATATTTCTCTCCCCGTGTTTACCGGATCTCGGATCGAAGCAATAGAAAGCTCCATCTTGAAAGTGGCATTGCTCAATACTCTAACCGGAGAATTTGTCAACCAAGGCCCCGAATCCACAGCCAAGGTAGAAATTGTGATTCTCGAAGGCGATTTTGAGGAAGATAACTGGACAATGGAAGAGTTTAAGAACAACATTGTAAGGGAAAGAGATGGCAAGAAACCCCTTCTAACAGGAGATTCTGTCCTTTTGAATCTTAAAGATGGGATTGGTTTGATAAATGAGATTTCTTTCACTGATAATTCAAGTTGGACAAGAAGTAGGAAGTTCAAGCTTGGAGCTATGATTGTTGACGAAACTAATGGAGTTAGAATTAGAGAAGCAAAGAGTGAAGCTTTTATCGTTCGAGATCACCGTGGAGAACTGTACAAGAAGCATCATCCTCCATCTCTATATGATGAGGTATGGAGACTAGAGAAAATTGGGAAAGATGGAGCTTTTCACAAACGTTTGAGCCAACAAAACGTCAATACAGTCAAAGATTTTCTTACCCTTCTTTTTGTAGATCCTCCGAGGCTTAGAAACATTCTCGGAACCGGGATGTCGGCTAAAATGTGGGAAGTAACCGCGGAGCATGCAAGAACATGTGTAATTGATAAGAGAAGATTCTTGTATAACTCATCGTCTTCTTCTTCTTCTTCTTCCTCTCAAGAGAGGAAGGGTGTAGTTTTTAATGCTGTTGGTGAAGTTTTGGGAATACTTTCAGATTGCAACTATGCTCTCATGGATAAGTTGTCTGAACTTGAGAAGTTTGATGCTTGGAACTTAGTGATCTCTGCATTTCAAAACTGGGATAAAGTCCTTTGTTTTGAAGATGAGCCCTCTCTACTCAACTACTCTCTTTGCTCCACAAGCTCATCACCCATGGCAGAGCAGGGTTCCGCTATTTACACACAACCCAATGCCTTATCTCCAGATATCATCTCAACCCTTTATTCCATTCCGGACCTGCAAACCGCAGACAACACAGGTCTTACTTATGGGCAGTTTTTGGATTTCAAAAATCAACCTGAACATTTGGTCTGTGATATCAACCCTTTCAATCAAGCCTTTTTTGAGCAAGACCATCTGAATTACTTTGACACTGACCTCCACTGCAACTTCAGTTTCGAAACTCAGACTGAAGAAGTTACCAAACCTCAAAGTAGTGGAGATGCATACCATTATCCATGGCAACGAGCTCAGATTAGATGGGCAAAGCTGTTTAGCATATTGAAATGGTTTTCAATAAGGAGGATTGTAGCTAATAGAAGAAGTTTAACTCAATAA 1341 40.49 MFVNNISLPVFTGSRIEAIESSILKVALLNTLTGEFVNQGPESTAKVEIVILEGDFEEDNWTMEEFKNNIVRERDGKKPLLTGDSVLLNLKDGIGLINEISFTDNSSWTRSRKFKLGAMIVDETNGVRIREAKSEAFIVRDHRGELYKKHHPPSLYDEVWRLEKIGKDGAFHKRLSQQNVNTVKDFLTLLFVDPPRLRNILGTGMSAKMWEVTAEHARTCVIDKRRFLYNSSSSSSSSSSQERKGVVFNAVGEVLGILSDCNYALMDKLSELEKFDAWNLVISAFQNWDKVLCFEDEPSLLNYSLCSTSSSPMAEQGSAIYTQPNALSPDIISTLYSIPDLQTADNTGLTYGQFLDFKNQPEHLVCDINPFNQAFFEQDHLNYFDTDLHCNFSFETQTEEVTKPQSSGDAYHYPWQRAQIRWAKLFSILKWFSIRRIVANRRSLTQ 446
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 717559 720204 + Conep13aG0012700.1 Cone13ag0122 450509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag0122 446 Pfam Calmodulin binding protein C-terminal domain 241 291 IPR046829 -
Cone13ag0122 446 Pfam Calmodulin binding protein-like N-terminal domain 1 142 IPR046831 -
Cone13ag0122 446 PANTHER OS02G0177800 PROTEIN 1 440 IPR012416 GO:0003700(PANTHER)|GO:0005516(InterPro)|GO:0005634(PANTHER)|GO:0043565(PANTHER)|GO:0080142(PANTHER)
Cone13ag0122 446 Pfam Calmodulin binding protein central domain 155 220 IPR046830 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0122 Cone-Chr13:717559 Cone6ag1054 Cone-Chr6:6149450 2.41E-94 dispersed
Cone13ag0122 Cone-Chr13:717559 Cone16ag0125 Cone-Chr16:706271 1.56E-139 wgd
Cone13ag0122 Cone-Chr13:717559 Cone19ag0124 Cone-Chr19:690718 1.45E-283 wgd
Cone13ag0122 Cone-Chr13:717559 Cone2ag0885 Cone-Chr2:34752469 4.97E-145 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag0122 - - - 0.0