Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag0132 ATGAATAAGATCCACACCCAACCTTACACCACCACCTCGGGCCTCCGCGGCCACATCAGCAAATCCCTCTCTCTCTGGAACAAAGTGCCCGTTTGGTACCAAGAGATACACGACCCCGGCTCGAGATTTGTCACAAAATGGAACCGGAACTTCCTCGTCATCTTCCTCATCGCCCTTTTTGTGGATCCCCTCTACTTTTACCTCCCTTTCATCAACACCCCAGCTTGTATGCGAACCGACATCGGTCTCGGAGTGATCATCACGATCCTCCGTACGATTTCAGATGCTTTCTTTTGTTTCTACATGTTCTTGAAGTTTCGTACTGCCTTTGTTTCCCCGACCTCTAGAGTCTTTGGACGCGGTGAGCTCGTGATGGACCAACACGCAATCGCTATACGTTATCTCAAGTCATTTTTTATCATAGATCTCGCCGCTGCTCTTCCTCTCCCGCAGATTGTAATTTGGGGAGTTGTTCCAGCATTCAAAAATCCAACAGCCTCCCTTGCTAACCACACTCTTGCTCTAGTTGTTCTATTTCAATATGTTCCTCGACTTTACGTTATTTTCCCTCTAAACCGGCGAATCAATAAAACGTCAGGTGCAGTTGCCCAGACGGCATGGGCTGGTGCAGCTTACAATCTCCTCCTCTACATCCTTGCCAGTCATGTTTTGGGAGCTATATGGTATGTGACATCAATTCAAAGACAACATGAATGTTGGAAGGAATATTGTGTAATGGAGATGAACGCAACACATTCACCATCGTGTGATCTTTTTTTCCTCGATTGCGATAGTGTGAATCAGCCTGAACGACAGGCTTGGCTAGAGATCACTCAAGTTGTCTCTAGTTGTGATGCGTTAGACGATGACGACAAAGACTTTCAGTTTGGAATGTTTGCCGATGCTTTTACCCGTCAAGTGGCTTCGACAAATTTTATCGAGAAATACTTCTACTGCCTTTGGTGGGGTTTGAAGCAATTAAGTTCATATGGACAAAACATTAAGACAAGCACATTTAGTGGCGAAACCTTATTTTGTATCGGAATTTGCTCGACCGGACTTGTTCTTTTCGCACATCTTATAGGCCAAGTGCAGAACTATTTGCAATCTACAACAGCAAGGCTCGAAGAATGGAGAATAAAACGGAAAGACACTGAGGAGTGGATGAAGCATCGACAACTTCCTCTGGAATTACAGGAACGTGTTCGTAGGTTTGTGCAATACCAATGGATTGTGACACAGGGTGTAGATGAAGAATCGATTTTGACCTCTTTGCCGATGGATCTCCGACGCCAAATCCAGAGGCACCTTTGTCTTGCCCTTGTTCGCCGCGTTCCCTTTTTTGCACAAATGGATGATCAACTTTTAGATGCTATATGCGAACGCCTAGTCTCATCGTTGAATACCAAAGATACGTTTTTAATCCGCGAGGGGGACCCGGTGAATGAGATGCTTTTCATCATAAGAGGGGAACTGGAGAGCTCAACGACAGATGGTGGAAGAACGGGATTTTTCAATTCCATTACCCTTCGGCCCGGTGACTTCTGTGGGGAAGAGTTGCTAACATGGGCCTTAGTACCAAATCCTAGCGTGAACCTTCCATCCTCGACCCGAACCGTCAAGTCACTGACCGAGGTTGAGGCTTTTGCGCTAAGAGCCGAAGACCTCAAGTTCGTCGCCAGTCAATTCAAGAGGCTACATAGCAAGAGACTCCGACATGCTTTTCGATATTATTCCCATCAGTGGCGAACGTGGGGAGCTTGTTATATACAAGCATCATGGAGACGGTACATTAAACGAAAACAAGCCAGGGAATTGGCTCAACAAGAGGAGCTTTATTACTCGAATGTGTATGATGAAGGTTATGACGACGGCGACTCGGGGAGTGGCAATATTGAAACTAGTGGTAGTGGTAGCACTAGTTCAAGCAATTTGCAACAATTTGGTGCTACATTTTTGGCTTCAAAATTTGCTGCAAATACTAGAAAAGGAGTTACTAGAAAGGCCTCTAGGATTGACACCGATTCAACGACCCTGTCAATTCCTAAGTTTTTCAAGCCAGAAGAACCTGATTTCTCCAAACTCCGTGAAGATAGTTAA 2100 45.43 MNKIHTQPYTTTSGLRGHISKSLSLWNKVPVWYQEIHDPGSRFVTKWNRNFLVIFLIALFVDPLYFYLPFINTPACMRTDIGLGVIITILRTISDAFFCFYMFLKFRTAFVSPTSRVFGRGELVMDQHAIAIRYLKSFFIIDLAAALPLPQIVIWGVVPAFKNPTASLANHTLALVVLFQYVPRLYVIFPLNRRINKTSGAVAQTAWAGAAYNLLLYILASHVLGAIWYVTSIQRQHECWKEYCVMEMNATHSPSCDLFFLDCDSVNQPERQAWLEITQVVSSCDALDDDDKDFQFGMFADAFTRQVASTNFIEKYFYCLWWGLKQLSSYGQNIKTSTFSGETLFCIGICSTGLVLFAHLIGQVQNYLQSTTARLEEWRIKRKDTEEWMKHRQLPLELQERVRRFVQYQWIVTQGVDEESILTSLPMDLRRQIQRHLCLALVRRVPFFAQMDDQLLDAICERLVSSLNTKDTFLIREGDPVNEMLFIIRGELESSTTDGGRTGFFNSITLRPGDFCGEELLTWALVPNPSVNLPSSTRTVKSLTEVEAFALRAEDLKFVASQFKRLHSKRLRHAFRYYSHQWRTWGACYIQASWRRYIKRKQARELAQQEELYYSNVYDEGYDDGDSGSGNIETSGSGSTSSSNLQQFGATFLASKFAANTRKGVTRKASRIDTDSTTLSIPKFFKPEEPDFSKLREDS 699
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 761986 764992 + Conep13aG0013700.1 Cone13ag0132 450519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag0132 699 CDD CAP_ED 447 578 IPR000595 -
Cone13ag0132 699 Gene3D Jelly Rolls 445 565 IPR014710 -
Cone13ag0132 699 Pfam Ion transport protein 50 374 IPR005821 GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone13ag0132 699 SUPERFAMILY Voltage-gated potassium channels 39 369 - -
Cone13ag0132 699 SUPERFAMILY cAMP-binding domain-like 376 572 IPR018490 -
Cone13ag0132 699 Gene3D - 43 371 - -
Cone13ag0132 699 FunFam Cyclic nucleotide-gated ion channel 1 445 563 - -
Cone13ag0132 699 Gene3D Helix hairpin bin 373 438 - -
Cone13ag0132 699 SMART cnmp_10 447 578 IPR000595 -
Cone13ag0132 699 ProSiteProfiles cAMP/cGMP binding motif profile. 447 521 IPR000595 -
Cone13ag0132 699 ProSiteProfiles IQ motif profile. 583 611 - -
Cone13ag0132 699 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 29 669 - -
Cone13ag0132 699 Pfam Cyclic nucleotide-binding domain 470 558 IPR000595 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0132 Cone-Chr13:761986 Cone16ag0355 Cone-Chr16:5854955 3.64E-277 dispersed
Cone11ag0123 Cone-Chr11:551157 Cone13ag0132 Cone-Chr13:761986 1.87E-124 wgd
Cone13ag0132 Cone-Chr13:761986 Cone18ag1355 Cone-Chr18:9328826 3.43E-283 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag0132 K05391 - csv:101209760 983.786