Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone13ag0133 | ATGGCTGCTAAGAGAGGGATTTCTTCTTTATTTTCTCGTTCTCTATCTGCTTTCGCTGTTTCTTCTGGGTCTTCTTCCTCTTCTCGTGTTTTTCCAGGAATAAATTCTACCGGGCAGAGAAGCATCAACCGGTTTAGCTCAGCCGCTCAGGCTGAAGAACTAATCTCTCCACATGTTCAAATTAAGCACACCCAGCTTCTAATAAATGGCCAATTTGTTGATGCTGTTTCAGGAAAAACGTTTCCGACATACGACCCTCGTACTGGGGAAGTGATTGCTCATGTCTCAGAAGGTGAAGCCGAAGATATTAACCAAGCCGTAGCTTCTGCTCGTAAAGCTTTCGATGAGGGACCCTGGCCTAGGATGTCTGCTTATGAAAGATCGAGGATACTGCTGCGGTTTGCTGATTTGGTTGAGAAACATAGTGAGGAACTTGCAAATCTGGAGTCATGGAATACTGGGAAACCTTATGAACAAGCTTCCAAATCCGAATTACCACTGCTAGTCCGTCTCTTTCACTACTATGCCGGATGGGCTGATAAAATCCATGGTCTGACGGTTCCGGCCGATGGAGACTATCATGTGGAAACATTGCACGAACCGATCGGTGTTGCCGGGCAGATAATTCCATGGAACTTTCCTTTGGTTATGTTTGCTTGGAAAGTGGGTCCCGCTCTAGCTTGTGGTAATACTGTTGTCCTCAAGACAGCTGAGCAAACACCTTTAACCGCTCTTCTCGTGGGAAAGCTATTCCATGAGGCCGGTCTTCCTCCTGGTGTTTTGAATATAGTTTCGGGTTTTGGTCCGACCGCTGGTGCACCTCTTGCTAGCCATATGGATGTGGACAAGGTAGCTTTCACAGGATCAACGGAGACAGGAAAAATCGTGCTCGAATTGGCTTCAAAGAGCAATCTCAAGCCGGTCACGTTGGAGCTAGGAGGGAAATCCCCTTTTATAGTGTGTGAAGATGCTGATGTTGATAAAGCTGTGGAGCTTGCACACTTTGCACTCTTTTTTAATCAGGGCCAATGTTGTTGTGCTGGATCTCGGACTTTTGTACACGAGCGTGTTTATGAGGAGTTTATCGAGAAATCAAAGGCCCGTGCTCTCAGGCGGGTCGTTGGTGATCCTTTTAGAAAGGGTGTTGAACAAGGTCCTCAAATCGACTCGGAGCAATTTAACAAAGTTCTTAGGTACATAAAGTCCGGTATAGAAAGCAATGCTACTTTGGAATGCGGAGGTGATAGAATTGGCTCTAAAGGGTACTTCATCCAGCCCACCGTCTTCTCAAATGTTCAGGATGATATGTTGATAGCACAAGATGAAATTTTTGGCCCAGTTCAATCCATCTTAAAATTTAAGGAATTGGACGAGGTAATAAAAAGGGCTAATGCGACTAGGTATGGGCTAGCCGCGGGAGTATTCACAAAGAACATTGACATGGCAAACCGTTTAACCCGAGCATTGAGGGCAGGGACAGTGTGGGTGAATTGCTTTGATGTGTTTGATGCTGCAATTCCTTTTGGTGGGTACAAGATGAGTGGTATCGGAAGGGAGAAAGGGATTTACAGCCTTAACAATTACTTGCAAGTCAAGGCTGTTGTTACTCCTCTAAAGAATCCAGCTTGGTTGTAA | 1635 | 45.5 | MAAKRGISSLFSRSLSAFAVSSGSSSSSRVFPGINSTGQRSINRFSSAAQAEELISPHVQIKHTQLLINGQFVDAVSGKTFPTYDPRTGEVIAHVSEGEAEDINQAVASARKAFDEGPWPRMSAYERSRILLRFADLVEKHSEELANLESWNTGKPYEQASKSELPLLVRLFHYYAGWADKIHGLTVPADGDYHVETLHEPIGVAGQIIPWNFPLVMFAWKVGPALACGNTVVLKTAEQTPLTALLVGKLFHEAGLPPGVLNIVSGFGPTAGAPLASHMDVDKVAFTGSTETGKIVLELASKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYEEFIEKSKARALRRVVGDPFRKGVEQGPQIDSEQFNKVLRYIKSGIESNATLECGGDRIGSKGYFIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKELDEVIKRANATRYGLAAGVFTKNIDMANRLTRALRAGTVWVNCFDVFDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAVVTPLKNPAWL | 544 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 13 | 765770 | 769967 | + | Conep13aG0013800.1 | Cone13ag0133 | 450520 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone13ag0133 | 544 | CDD | ALDH_F2BC | 61 | 536 | - | - | |
| Cone13ag0133 | 544 | FunFam | Aldehyde dehydrogenase, putative | 506 | 532 | - | - | |
| Cone13ag0133 | 544 | SUPERFAMILY | ALDH-like | 58 | 538 | IPR016161 | GO:0016491(InterPro) | |
| Cone13ag0133 | 544 | ProSitePatterns | Aldehyde dehydrogenases glutamic acid active site. | 310 | 317 | IPR029510 | GO:0016491(InterPro) | |
| Cone13ag0133 | 544 | PANTHER | ALDEHYDE DEHYDROGENASE-RELATED | 58 | 536 | - | GO:0004029(PANTHER) | |
| Cone13ag0133 | 544 | FunFam | Mitochondrial aldehyde dehydrogenase 2 | 316 | 505 | - | - | |
| Cone13ag0133 | 544 | Pfam | Aldehyde dehydrogenase family | 73 | 534 | IPR015590 | GO:0016491(InterPro) | |
| Cone13ag0133 | 544 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 2 | 316 | 505 | IPR016163 | GO:0016620(InterPro) | |
| Cone13ag0133 | 544 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 1 | 78 | 534 | IPR016162 | GO:0016491(InterPro) | |
| Cone13ag0133 | 544 | ProSitePatterns | Aldehyde dehydrogenases cysteine active site. | 338 | 349 | IPR016160 | GO:0016491(InterPro) | |
| Cone13ag0133 | 544 | FunFam | ALD5p Mitochondrial aldehyde dehydrogenase | 68 | 324 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone12ag0631 | Cone-Chr12:5686090 | Cone13ag0133 | Cone-Chr13:765770 | 7.81e-313 | dispersed | |
| Cone13ag0133 | Cone-Chr13:765770 | Cone7ag0693 | Cone-Chr7:3928633 | 3.05E-202 | dispersed | |
| Cone13ag0133 | Cone-Chr13:765770 | Cone8ag0655 | Cone-Chr8:6514282 | 4.80e-319 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone13ag0133 | K00128 | - | rcu:8289031 | 915.605 |