Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag0137 ATGAATAAATTGAAGTGGTTTAAGCCAATCTCAATCTCCATTAATGGGAGCAGTAGTAGGCTTGAAAGAAGGCTCTCTTTAGGGGAGTACAAAAGAGCAGAGTCATGGTCAAAGTACTTGGTATCATCTGGTGCAGAGATAAAGGGTGAAGCAGAAGAGGATTGGAGTGCTGACATGTCTCAATTGTTCATCGGCTCCAAATTTGCTTCAGGTAGGCATAGTAAGATCTATAGAGGGATTTATAAACAAGGAGATGTGGCAATTAAGCTTGTAAGCCGGCCTGAGGAAGATGAATGCTTGGCTACTATGCTTGAGAATCAATTCATCTCAGAAGTTGCCTTGTTGTTCCGTTTATGCCATCCGAATATCATCACCTTTATTGCAGCTTGTAAAAAACCACCCGTATTTTGCATCATCACAGAGTTTATGCCTGGGGGCTCGTTGAGAAAATTCCTCCACCAACAAGAACCACATTCGGTCCCACTCAACTTGGTTCTAAAACTAGCACTTGATATCTCACATGGGATGCAATACCTTCATTCTCAAGGAATACTCCATAGGGATCTCAAATCCGAGAATCTATTACTCGGGAAAGATATGTGTGTGAAGGTTGCGGACTTCGGAATCTCATGCGTAGAATCCCAATGTGGATCAGAAAGTGCAAAGCGATTTACGGGAACTTACCGTTGGATGGCACCCGAAATGATCAAGGAAAAAATCCAAACGAAAAAAGTCGATGTTTATAGTTTCGGGATCATTTTGTGGGAGCTTTTGACCGCATTGACACCGTTCGATAACTTGACTCCCGAACAGGCTGCTTTTGCTGTTTGCCACAAGAATGCAAGACCACCATTGCCACCCAGCTGCCCAAAAGCACTAAGTCGGCTAATCAACAGATGCTGGTCAAGCAATCCGGATAAGAGGCCACATTTTGACAAGATCACAACATTATTGGAGAGCTATGCGGAGTCTCTCGAACAAGACCCGGAATTTTTCTTGTCCTACGAAGCTCCTAGATGTCATAAGATTCTACAACGCATACCGAAATGTATAGCTGGCTAA 1062 43.31 MNKLKWFKPISISINGSSSRLERRLSLGEYKRAESWSKYLVSSGAEIKGEAEEDWSADMSQLFIGSKFASGRHSKIYRGIYKQGDVAIKLVSRPEEDECLATMLENQFISEVALLFRLCHPNIITFIAACKKPPVFCIITEFMPGGSLRKFLHQQEPHSVPLNLVLKLALDISHGMQYLHSQGILHRDLKSENLLLGKDMCVKVADFGISCVESQCGSESAKRFTGTYRWMAPEMIKEKIQTKKVDVYSFGIILWELLTALTPFDNLTPEQAAFAVCHKNARPPLPPSCPKALSRLINRCWSSNPDKRPHFDKITTLLESYAESLEQDPEFFLSYEAPRCHKILQRIPKCIAG 353
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 792263 794646 + Conep13aG0014200.1 Cone13ag0137 450524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag0137 353 PANTHER SERINE-THREONINE PROTEIN KINASE 58 319 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cone13ag0137 353 Gene3D Transferase(Phosphotransferase) domain 1 144 342 - -
Cone13ag0137 353 SMART serkin_6 62 322 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone13ag0137 353 PRINTS Tyrosine kinase catalytic domain signature 140 153 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone13ag0137 353 PRINTS Tyrosine kinase catalytic domain signature 245 267 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone13ag0137 353 PRINTS Tyrosine kinase catalytic domain signature 226 236 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone13ag0137 353 PRINTS Tyrosine kinase catalytic domain signature 289 311 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone13ag0137 353 PRINTS Tyrosine kinase catalytic domain signature 178 196 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone13ag0137 353 Pfam Protein tyrosine and serine/threonine kinase 65 316 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone13ag0137 353 ProSitePatterns Serine/Threonine protein kinases active-site signature. 184 196 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone13ag0137 353 FunFam Serine/threonine-protein kinase isoform 1 52 144 - -
Cone13ag0137 353 Gene3D Phosphorylase Kinase; domain 1 51 143 - -
Cone13ag0137 353 CDD STKc_MAP3K-like 69 318 - -
Cone13ag0137 353 ProSiteProfiles Protein kinase domain profile. 62 322 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone13ag0137 353 SUPERFAMILY Protein kinase-like (PK-like) 51 316 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0137 Cone-Chr13:792263 Cone2ag0904 Cone-Chr2:34854307 3.51E-173 dispersed
Cone17ag1464 Cone-Chr17:9917728 Cone13ag0137 Cone-Chr13:792263 3.08E-16 dispersed
Cone11ag0120 Cone-Chr11:540829 Cone13ag0137 Cone-Chr13:792263 3.82E-63 wgd
Cone13ag0137 Cone-Chr13:792263 Cone16ag0108 Cone-Chr16:632936 2.64E-195 wgd
Cone13ag0137 Cone-Chr13:792263 Cone18ag1359 Cone-Chr18:9340188 8.52E-63 wgd
Cone13ag0137 Cone-Chr13:792263 Cone19ag0138 Cone-Chr19:746743 1.74E-247 wgd
Cone13ag0137 Cone-Chr13:792263 Cone2ag0900 Cone-Chr2:34824127 1.44E-64 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82000 PF00249 Myb_DNA-binding 4.30E-11 CL0123 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag0137 - - - 0.0