Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag0145 ATGCCGACTGGTGTACCAAACCTTGCACCTCAGCGGACTCTCCGAGGCTCTCCCACTTTCTCTCCTCTCAGATCTCAGTTCACAATCGCCAAAATGCAGAGCTCCGCCTGTACATTCTCACCTTCGCTTCCACTTCTCAAGCCTCGAAGACCTTCGAATCCAGCTCGCATTGCTGTGTTCAGCTCCACGCGTTCCTCCTCGGCGAATCTTAACGATGTCGACAGTTCCGGTAATGTCTCTTTCTCTTCGTCTTTGCCTCGCCGATCGTGGTCTCTGTCTTCTTCTCCGTTCGCTTCTTCGAGAATCAGGCCATGGAACGGTGTGTCCTTGCTCAGTTCTGATTCGGAATCTAGTCGGTTTGAGGTCAGAGCCGCCTCTGCGCCGGAGAGCGCAGAAGAGAGTAGAGAGTCAAGTAGCTTGTTCAAGACGTTGGAGCTTGGAGCGTTGTTTGGCCTATGGTACCTCTTCAATATCTACTTCAATATCTACAACAAGCAGGTCTTGAAGGTGTACCAGTTCCCCGTGACAGTCACTGCAGTTCAGTTTGCCGTTGGCTCTGTGCTTGTTCTTTTCATGTGGGGTTTTAATCTCTATAAAAGACCGAAAATTAGTGGCAAACTGCTTGCAGCAATAGTACCACTGGCAGTTGTTCATACTTTAGGGAACCTTTTCACAAACATGAGTCTTGGAAAAGTGGCTGTATCATTCACTCACACGATAAAAGCTTCAGAGCCTTTATTTTCAGTCCTCCTATCTGCTATATTTCTTGGAGAGTTTCCAACTCCATGGGTAGTTGGTTCCCTACTACCAATTGTTGGTGGGGTGGCATTGGCATCAGCCACTGAAGCTTCATTTAATTGGGCTGGATTTTGGAGTGCCATGGCTTCTAATGTGACAAATCAGTCCCGTAATGTCCTTAGCAAAAAGGTCATGGTGAATAAAGAGGAAAAGATGGACAACATTACTCTCTTCTCAATCATAACATTAATGTCCTTTGTATTGTTAGCACCCGTGTCTATCTTCTTGGAAGGTGTTAATTTTACTCCCACGTACCTGCAAGCTGCTGGATTGAATGTTAAACAACTATACACCAGATCTCTTCTGGCCGCACTCTGCTTCCATGCCTATCAACAGGTCTCCTATATGATTTTGCAGAGAGTCTCACCTGTGACCCACTCCGTTGGTAATTGTGTGAAACGGGTGGTGGTCATTGTCAGCTCTGTTATCTTCTTCAAAACACCTGTTTCACCTATCAACTCCCTTGGTACAGGAGTGGCTCTTGCCGGAGTCTTCTTGTATTCTAGGGTGAAGCGAATCAAGTCAAAGCCAAAGACAGCTTAA 1341 46.61 MPTGVPNLAPQRTLRGSPTFSPLRSQFTIAKMQSSACTFSPSLPLLKPRRPSNPARIAVFSSTRSSSANLNDVDSSGNVSFSSSLPRRSWSLSSSPFASSRIRPWNGVSLLSSDSESSRFEVRAASAPESAEESRESSSLFKTLELGALFGLWYLFNIYFNIYNKQVLKVYQFPVTVTAVQFAVGSVLVLFMWGFNLYKRPKISGKLLAAIVPLAVVHTLGNLFTNMSLGKVAVSFTHTIKASEPLFSVLLSAIFLGEFPTPWVVGSLLPIVGGVALASATEASFNWAGFWSAMASNVTNQSRNVLSKKVMVNKEEKMDNITLFSIITLMSFVLLAPVSIFLEGVNFTPTYLQAAGLNVKQLYTRSLLAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIFFKTPVSPINSLGTGVALAGVFLYSRVKRIKSKPKTA 446
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 911231 914750 - Conep13aG0015000.1 Cone13ag0145 450532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag0145 446 MobiDBLite consensus disorder prediction 1 21 - -
Cone13ag0145 446 MobiDBLite consensus disorder prediction 67 98 - -
Cone13ag0145 446 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 144 444 IPR004696 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Cone13ag0145 446 PANTHER SOLUTE CARRIER FAMILY 35 137 435 IPR050186 GO:0005794(PANTHER)|GO:0015297(PANTHER)
Cone13ag0145 446 SUPERFAMILY Multidrug resistance efflux transporter EmrE 358 437 - -
Cone13ag0145 446 Pfam Triose-phosphate Transporter family 145 434 IPR004853 -
Cone13ag0145 446 SUPERFAMILY Multidrug resistance efflux transporter EmrE 189 279 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0145 Cone-Chr13:911231 Cone14ag1131 Cone-Chr14:9400025 1.31E-68 dispersed
Cone11ag0106 Cone-Chr11:463083 Cone13ag0145 Cone-Chr13:911231 4.63E-144 wgd
Cone13ag0145 Cone-Chr13:911231 Cone16ag0098 Cone-Chr16:545209 7.83E-208 wgd
Cone13ag0145 Cone-Chr13:911231 Cone19ag0142 Cone-Chr19:787906 4.58E-264 wgd
Cone13ag0145 Cone-Chr13:911231 Cone2ag0910 Cone-Chr2:34906514 5.88E-206 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag0145 K15283 - csv:101203848 591.267