Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag0169 ATGGAATCTGGGAGTAGGTTTTACCCTGGTAGTGATGATTTTAGGTTGGAATCAAAGTGGCTGATTGATCCTAAGCTTCTTTTTGTGGGGCCAAGGATTGGAGAAGGTGCTCATGCTAAAGTCTATGAGGGCAAATATAAAAAGCAGACAGTTGCTATCAAAATTGTTCATAAAGGGGAAACCCAGGAGGAGATTATCAAGAGAGAAGGAAGGTTTGCTAGAGAGGTTCAAATGTTATCTCGAGTCCAACATAAAAACTTGGTCAAGTTTATGGGTGCTTGCAAGGAGCCAGTAATGGTGATAGTTACGGAGTTGTTATCGGGTGGCACTTTACGTAAGTACTTGCTGAATATGAGGCCTAAGTGTTTGGACTCCCGTTTAGCCGTTGGTTTCGCACTAGATATTGCTCGTGCTATGGAATGCTTGCACTCCCATGGTATCATTCATCGAGATTTAAAACCTGAGAACTTGCTCCTGACTGCAGATCAGAAAACAGTAAAATTAGCTGATTTTGGTTTAGCTAGAGAGGAGTCACTGACAGAAATGATGACTGCTGAAACCGGGACCTACCGTTGGATGGCTCCCGAGTTATATAGTACTGTTACATTAAGGCAAGGGGAGAAGAAACATTACAATCATAAAGTGGATGCTTATAGCTTTGCAATTGTGTTGTGGGAACTCTTGCACAACAAATTGCCCTTTGAAGGCATGTCAAACCTCCAAGCCGCATATGCTGCCGCTTTCAAGAATATGCGACCTAGTGCCGATAATGTTCCAGAAGAATTGTCTATTATTCTAACTTCATGCTGGCAAGAGGACGCTAATGCTCGGCCCAATTTCGGTCAAATAATCCAAATGCTCCTTAATTATCTCTACACTATCTCTCCTCCAGAACCCATCATTCCCTCTCGGATTTTCGCTTCAGAGAACACGGTACTACCGCCAGAATCTCCCGGCACAAGCTCTTTAATGGCAGTACATGATGATTCTGGGGAGACCCCGAAAATAAGGCCAAAAGGGTTTTTCTTCTGCTTTAATGAGTGTTACTAA 1050 43.05 MESGSRFYPGSDDFRLESKWLIDPKLLFVGPRIGEGAHAKVYEGKYKKQTVAIKIVHKGETQEEIIKREGRFAREVQMLSRVQHKNLVKFMGACKEPVMVIVTELLSGGTLRKYLLNMRPKCLDSRLAVGFALDIARAMECLHSHGIIHRDLKPENLLLTADQKTVKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNHKVDAYSFAIVLWELLHNKLPFEGMSNLQAAYAAAFKNMRPSADNVPEELSIILTSCWQEDANARPNFGQIIQMLLNYLYTISPPEPIIPSRIFASENTVLPPESPGTSSLMAVHDDSGETPKIRPKGFFFCFNECY 349
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 1053186 1056317 + Conep13aG0017400.1 Cone13ag0169 450556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag0169 349 PANTHER SERINE-THREONINE PROTEIN KINASE 22 288 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cone13ag0169 349 Gene3D Phosphorylase Kinase; domain 1 15 106 - -
Cone13ag0169 349 ProSiteProfiles Protein kinase domain profile. 27 291 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone13ag0169 349 Pfam Protein tyrosine and serine/threonine kinase 32 287 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone13ag0169 349 SUPERFAMILY Protein kinase-like (PK-like) 20 317 IPR011009 -
Cone13ag0169 349 FunFam Kinase suppressor of Ras 1 16 106 - -
Cone13ag0169 349 SMART serkin_6 27 291 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone13ag0169 349 ProSitePatterns Protein kinases ATP-binding region signature. 33 54 IPR017441 GO:0005524(InterPro)
Cone13ag0169 349 CDD STKc_MAP3K-like 33 287 - -
Cone13ag0169 349 PRINTS Tyrosine kinase catalytic domain signature 141 159 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone13ag0169 349 PRINTS Tyrosine kinase catalytic domain signature 258 280 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone13ag0169 349 PRINTS Tyrosine kinase catalytic domain signature 215 237 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone13ag0169 349 PRINTS Tyrosine kinase catalytic domain signature 103 116 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone13ag0169 349 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone13ag0169 349 Gene3D Transferase(Phosphotransferase) domain 1 107 295 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0169 Cone-Chr13:1053186 Cone18ag1380 Cone-Chr18:9463826 5.08E-198 dispersed
Cone11ag0095 Cone-Chr11:406377 Cone13ag0169 Cone-Chr13:1053186 1.75E-144 wgd
Cone13ag0169 Cone-Chr13:1053186 Cone19ag0166 Cone-Chr19:953893 1.49E-246 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82002 None None None None Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag0169 - - - 0.0