Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone13ag0183 | ATGTCAGCTAATTTCCTGCCAATTTCACTGCAAGTTCTAACCTCCTTCTTATCCTTTCCCTATGCCTTCACCATCTCAACTACAATCTTCATCCTCCTCCTACTCCGACTCCTCCTCCATAGGAGGCGGCAGCAACCTCGTTCCTCTGCTGCAAAAAACCGCCTACCAACTCTCCCGAAACTACCCATCTTCGGAAACCTCTTCGACATGGGCTCCCACCCGCACACAACCCTAAGAAACTTGGCCCAAATCCATGGCCCGATCATGCTCCTCCACTTCGGCAACGTACCGGTCCTTGTCGTCTCCTCCCCCGATTCCGCATCCGAAATCATGAAAACCCATGACATCATATTTGCAAATCGGCCCTCTTTAAACATGTGGAAAAAACTAGTCTATGACCGCAAAGACATAGCTGCTGCACCTTATGGTGACTATTGGAGGCAACAGAAAAGTGTTTGCGTTCTTCATCTCCTGAGCAACAAAATGGTTAAGTCCTTTCGTGCGATTAGAGAAGAGGAAACGAACTTAATGATTCAGAAGATCATTAATAAATATTCTTCTTCTTCTTCTAAAGAAGAAGTTGTAATCAATTTGAGTGAAGTGTTTGTTAAGTTGACTAATGATGTGATTTGTAGGGTGGCTTTAGGGAAGAAGTATGGAGGGGAAGAAGATCAAGCGAAGAAATTTAAGGGGTTATTATGGGAACTGACGGAATTGTTGGGTGTTTTTGATATAGGGGATTATATTCCATGGCTTGGTTGGGTGAATTATGTGAGTGGCTTGTATGCTAGGGCAGACAAGGTTGCTAAGGAGTTTGATGTGTTTTTAGATAAAGTTGTGAAAGAGCATGTTGATCGGAAAAAGGAAGATCGTGATGATCATGATAGTCATAAGGATTTTGTGGATGTTTTGCTTGAAGTTCAGAAAGAGAACTCAACTGGGTTTTCTCTCGACACTGTTAGCGTCAAGGCTCTGATTTTGGATATATTTGCTGCAGGTACTGATACTACATCAATTATACTCGAATGGGGAATGACAGAACTATTAAGAAACCCTATGGTCATGAAAAAACTACAAAATGAAGTGAAACAGGTGACTGGCTCCAAAACAGAAGTTACAGAAGATAAATTAGACCAAATGCCTTACTTAAAAGCGGTAATCAAAGAAACTCTACGCTTACATACTCCAGCTCCGCTGCTTATCCCTAGAAAATCAATCCAAAACGTCACCGTAAAAGGTTATGACGTCGATGCTGGAACAATTGTGTTGATCAATGCTTCTGCCATTGGAAGAGATTCATCCATATGGGACAAGCCGGATGAGTTTAACCCGGAAAGGTTTCTGAATAGCTCGATAGATTTCAAAGGCCATGATTTTGAATTGATCCCATTTGGAGCTGGGAGGAGGGCTTGCCCTGGAATTTTATTTGCTAATATTATTAATGAGCTTGCTCTGGCTAATCTTGTCTATCATTTTGATTGGGGTTTGCCTGGTGGAGCAAGGGCTGAGGATTTGGACATTAATGAATGCTTCGGATTGACTATAAAGAGGAAAGTCCCTCTGCTTGCTGTTGCTACTCCTTGTTCTTCAATGTAG | 1596 | 42.23 | MSANFLPISLQVLTSFLSFPYAFTISTTIFILLLLRLLLHRRRQQPRSSAAKNRLPTLPKLPIFGNLFDMGSHPHTTLRNLAQIHGPIMLLHFGNVPVLVVSSPDSASEIMKTHDIIFANRPSLNMWKKLVYDRKDIAAAPYGDYWRQQKSVCVLHLLSNKMVKSFRAIREEETNLMIQKIINKYSSSSSKEEVVINLSEVFVKLTNDVICRVALGKKYGGEEDQAKKFKGLLWELTELLGVFDIGDYIPWLGWVNYVSGLYARADKVAKEFDVFLDKVVKEHVDRKKEDRDDHDSHKDFVDVLLEVQKENSTGFSLDTVSVKALILDIFAAGTDTTSIILEWGMTELLRNPMVMKKLQNEVKQVTGSKTEVTEDKLDQMPYLKAVIKETLRLHTPAPLLIPRKSIQNVTVKGYDVDAGTIVLINASAIGRDSSIWDKPDEFNPERFLNSSIDFKGHDFELIPFGAGRRACPGILFANIINELALANLVYHFDWGLPGGARAEDLDINECFGLTIKRKVPLLAVATPCSSM | 531 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 13 | 1136459 | 1138370 | + | Conep13aG0018800.1 | Cone13ag0183 | 450570 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone13ag0183 | 531 | Gene3D | Cytochrome P450 | 39 | 523 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0183 | 531 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 464 | 473 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone13ag0183 | 531 | CDD | CYP71-like | 85 | 521 | - | - | |
| Cone13ag0183 | 531 | SUPERFAMILY | Cytochrome P450 | 56 | 527 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0183 | 531 | FunFam | Cytochrome P450 83B1 | 42 | 524 | - | - | |
| Cone13ag0183 | 531 | PRINTS | E-class P450 group I signature | 205 | 223 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0183 | 531 | PRINTS | E-class P450 group I signature | 82 | 101 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0183 | 531 | PRINTS | E-class P450 group I signature | 321 | 338 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0183 | 531 | PRINTS | E-class P450 group I signature | 341 | 367 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0183 | 531 | PRINTS | E-class P450 group I signature | 471 | 494 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0183 | 531 | PRINTS | E-class P450 group I signature | 384 | 402 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0183 | 531 | PRINTS | E-class P450 group I signature | 461 | 471 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0183 | 531 | PRINTS | E-class P450 group I signature | 106 | 127 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0183 | 531 | PRINTS | E-class P450 group I signature | 425 | 449 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0183 | 531 | PRINTS | P450 superfamily signature | 462 | 471 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0183 | 531 | PRINTS | P450 superfamily signature | 332 | 349 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0183 | 531 | PRINTS | P450 superfamily signature | 385 | 396 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0183 | 531 | PANTHER | CYTOCHROME P450 71B11-RELATED | 30 | 525 | IPR050193 | - | |
| Cone13ag0183 | 531 | Pfam | Cytochrome P450 | 57 | 514 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0183 | 531 | Coils | Coil | 355 | 375 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone13ag0183 | Cone-Chr13:1136459 | Cone19ag0177 | Cone-Chr19:1127062 | 1.17e-316 | dispersed | |
| Cone7ag1403 | Cone-Chr7:10045225 | Cone13ag0183 | Cone-Chr13:1136459 | 4.17E-49 | dispersed | |
| Cone13ag0183 | Cone-Chr13:1136459 | Cone13ag0184 | Cone-Chr13:1140732 | 7.25E-130 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone13ag0183 | - | - | - | 0.0 |