Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag0190 ATGGGAGTTTCCTCCCTCTGCAAATCACTCCACCTCCCTCTTCTCACCTTCCTCTCTCTCCTCCTTCTCATCAATGCCAGATTACATCTCCACCCTTCAGATCTCAAAGCCTTATCTACCATCACAACAGATTTGGGAGTCACCGGTCATCGCCTCACCTTCACCTCACCATGTATGACAGCCGGTGTTTTCTGTGAGAGGAGGCTGCTTTGCAGCAACAACAATACCTATGTATTAAGGGTCACTAGGCTCGTGTTTAAATCACAGAGCCTCACCGGATTTCTTTCCTATGAAATCGGACGGCTCTCAGAGCTCAGGGAGCTCTCTGTTTCTAAAAATTTTCTCGTTGACCAAATACCAGCCCAAATCGTTGACTGCAGAAAACTTGAAATCCTTGACCTCAAAAGCAACAGATTTTCTGGGAAAATTCCATCCGAATTGTCCTCACTCACACGCCTCAAAGCGCTTGATATTTCCTCGAATGAGTTTTCTGGAGATTTGAGTTTCTTGAAGTATTTTCCCAACCTGGAAAGTCTTTCTATCTCAGACAATCAATTTTCCGGGAAAATCCCAGCTTCAATCAGATCGTTTCGGAATCTCAGGGTGTTTAACTTTTCTGGGAATCCTTTTCTAGAAAGTTCAGTTCCCATGATGAAAGGTGTAGAGTACTCAGCAGGCAATAATCTTCCTAAGCGTTATATATTAGCTGAGACTAATTCAACTAGTACAAAGAGCAATACTAGTTCTCATTCAGCTATTGCACCAAGTGCTCAAGCTCCATCTCCAATGGAAGAACCAAAAAAGCACAAGAACATCAAAAGAAAGATTTTTACTTGGCTGCTTGGGTTTCTAGCCGGAGCAATATGCGGAATAGTAACTGGGCTTATCATTTCTCTTCTGTTTAAGCTTGTTTTAGCCGCCATAAAAGGAGGAGGAAGAAATAAAGGCCCATCTATCTTCAGTCCTATGATTAAAAAAGCAGAGGACTTATCTTTCCTAGAGAAAGATGATGGACTTGCAACATTAGAGCTAATTGGAAAAGGCGGCTGTGGAGAAGTTTACAAAGCTGAATTACCTGGAAGCAATGGAAAGATGATTGCTATAAAAAAAATAATCCAACCTCCAAAAGATGCATCAGAATTGGCAGAAGAAGGAACTAAAGATATGCATAAAAAAATGCGTCAGATCAAATCGGAAATCAACACAGTGGGCCAAATCCGTCACCGGAATCTCCTCCCTCTCCTGGCCCACGTTCCTCGGCCTGATTGCCATTACCTGGTCTACGAATTCATGAAAAATGGTAGCTTACAAGATATGTTAAACAAGGTTTCACAAGGGAATGCAGAACTAGACTGGTTTACTAGGCATAGGATTGCACATGGAGTAGCAGCTGGGCTTGAATATCTTCACATGAATCATAGCCCGAGAATAATCCATAGAGATCTTAAGCCGGCTAATATTCTACTAGATGATGACATGGAGGCCAGGATTGCAGATTTCGGTTTAGCTAAAGCAATGCCGGATGCACACACTCATATTACAAGTTCCAATGTGGCGGGAACTGTTGGGTATATAGCTCCAGAGTATTACCAGACACTGAAGCTCACTGACAAGTGCGACATCTACAGTTTTGGTGTTATGCTCAGCGTGCTTGTGATGGGGAAGCTTCCTTCTGATGAGTTTTTCCAGCATACGGATGAGATGAGCTTGGTGAAGTGGCTGAGGAATGTGATGAGTTCAGAGGATCCTCAAAGAGCGATCGACACGAAACTGATGGGGAAAGGGTGGGAAGAGCAGATGCTATTGGTGTTGAAGATTGCTTGTTTCTGCACTTTAGATAACCCTAAAGAAAGACCTAATAGTAAGGATGTTAGATGCATGTTGTCTCAGATTAAGAACTAG 1902 42.8 MGVSSLCKSLHLPLLTFLSLLLLINARLHLHPSDLKALSTITTDLGVTGHRLTFTSPCMTAGVFCERRLLCSNNNTYVLRVTRLVFKSQSLTGFLSYEIGRLSELRELSVSKNFLVDQIPAQIVDCRKLEILDLKSNRFSGKIPSELSSLTRLKALDISSNEFSGDLSFLKYFPNLESLSISDNQFSGKIPASIRSFRNLRVFNFSGNPFLESSVPMMKGVEYSAGNNLPKRYILAETNSTSTKSNTSSHSAIAPSAQAPSPMEEPKKHKNIKRKIFTWLLGFLAGAICGIVTGLIISLLFKLVLAAIKGGGRNKGPSIFSPMIKKAEDLSFLEKDDGLATLELIGKGGCGEVYKAELPGSNGKMIAIKKIIQPPKDASELAEEGTKDMHKKMRQIKSEINTVGQIRHRNLLPLLAHVPRPDCHYLVYEFMKNGSLQDMLNKVSQGNAELDWFTRHRIAHGVAAGLEYLHMNHSPRIIHRDLKPANILLDDDMEARIADFGLAKAMPDAHTHITSSNVAGTVGYIAPEYYQTLKLTDKCDIYSFGVMLSVLVMGKLPSDEFFQHTDEMSLVKWLRNVMSSEDPQRAIDTKLMGKGWEEQMLLVLKIACFCTLDNPKERPNSKDVRCMLSQIKN 633
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 1182897 1185142 + Conep13aG0019500.1 Cone13ag0190 450577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag0190 633 Gene3D Phosphorylase Kinase; domain 1 329 430 - -
Cone13ag0190 633 SUPERFAMILY L domain-like 56 213 - -
Cone13ag0190 633 SUPERFAMILY Protein kinase-like (PK-like) 333 628 IPR011009 -
Cone13ag0190 633 Gene3D Transferase(Phosphotransferase) domain 1 431 633 - -
Cone13ag0190 633 FunFam Leucine-rich repeat receptor protein kinase EMS1 74 170 - -
Cone13ag0190 633 Gene3D Ribonuclease Inhibitor 147 219 IPR032675 -
Cone13ag0190 633 ProSiteProfiles Protein kinase domain profile. 339 633 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone13ag0190 633 Pfam Leucine Rich Repeat 175 196 IPR001611 GO:0005515(InterPro)
Cone13ag0190 633 Gene3D Ribonuclease Inhibitor 33 146 IPR032675 -
Cone13ag0190 633 Pfam Leucine rich repeat 104 162 IPR001611 GO:0005515(InterPro)
Cone13ag0190 633 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone13ag0190 633 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 227 633 IPR051564 GO:0016020(PANTHER)
Cone13ag0190 633 Pfam Protein kinase domain 341 623 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone13ag0190 633 SMART serkin_6 339 632 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone13ag0190 633 FunFam leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1 326 430 - -
Cone13ag0190 633 MobiDBLite consensus disorder prediction 240 256 - -
Cone13ag0190 633 MobiDBLite consensus disorder prediction 240 266 - -
Cone13ag0190 633 FunFam Leucine-rich repeat receptor-like protein kinase 431 633 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0190 Cone-Chr13:1182897 Cone15ag1304 Cone-Chr15:10182636 3.55E-59 dispersed
Cone13ag0190 Cone-Chr13:1182897 Cone19ag0183 Cone-Chr19:1158498 6.09e-319 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82004 PF13921 Myb_DNA-bind_6 7.10E-19 CL0123 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag0190 - - - 0.0