Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone13ag0192 | ATGGCCCCACTACATTCCTCTTCTCTCTCTCTCTCACTCATCTTCCTCTTTTCTCTCCTCACCCTTTCCCTCTCCTCTTCCTCCTCCTCACCGGCTGCCAGTGACCCTGAACTTGTAGTGCAAGATGTGCATAGGAGCATCAACGAATCGAGGAGGAATTTGGCCTATCTCTCGTGTGGAACGGGCAATCCGATCGACGATTGTTGGCGATGTGACCCGAATTGGGAAAAGAATCGTCAGAGGCTAGCGGATTGTGCAATAGGGTTTGGAAAGAATGCTATTGGAGGAAGAGATGGAAAGATTTACGAGATCACGGATGATAGTGATGATGATCCTGTAACCCCAAAACCGGGTACATTACGGTATGCGGTGATCCAGGACGAACCTCTTTGGATAATTTTCCCCCGCGACATGACCATCAGGCTGAAAGAGGAACTGATCATGAACTCGTTCAAAACAATTGACGGCAGAGGGGCTAGTGTTCACATTGCTGGCGGTCCGTGCATCACTATTCAATACGTTACGAATATTATCATCCACGGGATAAACATACATGACTGTAAGCAAGGAGGGAATACTGACGTGAGGGACTCCCCAGGGCATTACGGGTGGAGGACGATATCGGACGGTGATGGGGTATCGATCTTCGGCGGGAGCCATGTTTGGGTGGACCATTGCTCATTGTCAAACTGCAACGACGGGTTGATTGATGCAATCCATGGGTCCAATTTCATCACCATCTCGAACAACTATATGACCCACCATGATAAGGTCATGTTGTTAGGACACAGTGATTCCTACACCCAAGATAAGGACATGCAAGTAACTATAGCTTTCAATCACTTTGGAGAAGGCCTTGTCCAAAGAATGCCTAGATGTAGACATGGATATTTCCATGTGGTGAACAATGACTATACCCATTGGGAGATGTATGCAATTGGAGGTAGTGCTTCACCCACCATTAATAGCCAAGGCAACAGATTTGTAGCTCCAGATGATAGATCCAGCAAAGAGGTGACTAAACGTGAGGAGGCATCGGAGGACGAATGGAGCAGCTGGAATTGGAGGTCAGAAGGAGACTTGCTGGTAAACGGTGCGTTTTTTACAGCATCAGGAGCTGGATCTTCGTCCACGTATGCAAGAGCTTCTAGTTTGAGTGCGAGACCATCTTCTCTTGTCGGTTCGATAACGACCGCGGCGGGTGTATTGAATTGCAAGAAGGGCTCCCGTTGCTGA | 1236 | 48.22 | MAPLHSSSLSLSLIFLFSLLTLSLSSSSSSPAASDPELVVQDVHRSINESRRNLAYLSCGTGNPIDDCWRCDPNWEKNRQRLADCAIGFGKNAIGGRDGKIYEITDDSDDDPVTPKPGTLRYAVIQDEPLWIIFPRDMTIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCKQGGNTDVRDSPGHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSNFITISNNYMTHHDKVMLLGHSDSYTQDKDMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTINSQGNRFVAPDDRSSKEVTKREEASEDEWSSWNWRSEGDLLVNGAFFTASGAGSSSTYARASSLSARPSSLVGSITTAAGVLNCKKGSRC | 411 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 1209138 | 1211056 | - | Conep13aG0019700.1 | Cone13ag0192 | 450579 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone13ag0192 | 411 | Gene3D | - | 62 | 404 | IPR012334 | - | |
Cone13ag0192 | 411 | FunFam | Pectate lyase | 62 | 404 | - | - | |
Cone13ag0192 | 411 | SMART | amb_all | 137 | 334 | IPR002022 | - | |
Cone13ag0192 | 411 | MobiDBLite | consensus disorder prediction | 331 | 346 | - | - | |
Cone13ag0192 | 411 | Pfam | Pectate lyase | 147 | 328 | IPR002022 | - | |
Cone13ag0192 | 411 | PRINTS | Pollen allergen Amb family signature | 109 | 134 | IPR018082 | - | |
Cone13ag0192 | 411 | PRINTS | Pollen allergen Amb family signature | 311 | 330 | IPR018082 | - | |
Cone13ag0192 | 411 | PRINTS | Pollen allergen Amb family signature | 353 | 377 | IPR018082 | - | |
Cone13ag0192 | 411 | PRINTS | Pollen allergen Amb family signature | 289 | 308 | IPR018082 | - | |
Cone13ag0192 | 411 | PRINTS | Pollen allergen Amb family signature | 209 | 230 | IPR018082 | - | |
Cone13ag0192 | 411 | PRINTS | Pollen allergen Amb family signature | 85 | 102 | IPR018082 | - | |
Cone13ag0192 | 411 | PRINTS | Pollen allergen Amb family signature | 145 | 161 | IPR018082 | - | |
Cone13ag0192 | 411 | PRINTS | Pollen allergen Amb family signature | 382 | 405 | IPR018082 | - | |
Cone13ag0192 | 411 | MobiDBLite | consensus disorder prediction | 323 | 346 | - | - | |
Cone13ag0192 | 411 | SUPERFAMILY | Pectin lyase-like | 63 | 402 | IPR011050 | - | |
Cone13ag0192 | 411 | PANTHER | PECTATE LYASE 18-RELATED | 17 | 408 | IPR045032 | GO:0030570(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone13ag0192 | Cone-Chr13:1209138 | Cone14ag0210 | Cone-Chr14:975609 | 3.12E-210 | dispersed | |
Cone12ag0688 | Cone-Chr12:6283813 | Cone13ag0192 | Cone-Chr13:1209138 | 3.46E-228 | wgd | |
Cone13ag0192 | Cone-Chr13:1209138 | Cone16ag0056 | Cone-Chr16:296641 | 8.64E-250 | wgd | |
Cone13ag0192 | Cone-Chr13:1209138 | Cone2ag0944 | Cone-Chr2:35120894 | 3.63E-250 | wgd | |
Cone13ag0192 | Cone-Chr13:1209138 | Cone8ag0710 | Cone-Chr8:7123264 | 3.11E-222 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone13ag0192 | K01728 | - | gmx:100101868 | 692.189 |