Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag0207 ATGGATAGGGTTTACGACAATTGGGAGAGGCTAGTGCGCTCGACGTTGAAGCGGGAGCAGCTAAAAAATGCCGGCCAAGGCCACGAGAGGACTCAGAGTGGGATTGCTGGATCTGTCCCGCCCTCACTTGGTAAGACCACGAACATAGACGCGATCTTGCAGGCGGCAGATGAGATCCAGGCGGACGACCCTAAAGTTTCCAGGATTTTGTGTGAGCAGGCCTTTAGTATGGCGCAAGCCCTTGATCCCAACAGTGATGGTAAAGGTGTTCTCCAGTTCAAGACGGGATTGATGTCCGTTATTCAGCAAAAACTTGCCAAAAGAGATGGGTCCCAGATTGATCGTAATCGTGATATTGAGCACCTATGGGAGTTCTACCAGCGGTATAAGAGACAACATAGAGTTGATGATTTACAGAGAGAGGAACAAAAATGGCGCGAGTCTGGAACTCTTAGTGCTAACCTTGGAGAGATGGAGCGTAGATATTCTGAAATGAGAAAAGTAATTGCTACATTGAGGGCTTTAGTCAAGGTCATGGAGGCACTTAGCCAAGTTGCAGATCCTGTGGGAGTTGGAAGATTAATTAAGGAGGAGTTGGCAAGAATAAAAAAATCTGATGCAAATTTATCGGCAGAACTTGTATCATACAATATTGTCCCTTTGGATGCACCCCAAATGACTAATGCCATTGGAGTTTTCCCAGAAGTTAGAGGTGCAATATCTGCAATCAGATATACAGAACAGCTCCCCAGACTTCCTGCTGATCATGACATTTCTGGACAGAGGAATGCAGACATGTTCGACCTTCTAGAATATGTGTTTGGTTTCCAGAGGGACAATATAAGAAACCAACGGGAAAATTTGGTTCTCGCTATAGCTAATGCACAGTCTCGACTTGGGATTCCTGTTGAAACTGATCCAAAAATAGACGAGAAAGCTATCAATGAAGTTTTTCTGAAGGTGCTTGACAATTACATCAAATGGTGTAGATACTTGCGGATACGCCTTGTCTGGAACAGTTTGGAAGCTATTAACAGGGACAGGAAGCTTTTTCTGCTGTCATTGTACTTTCTTATATGGGGTGAAGCTGCAAACGTTCGTTTCCTTCCTGAATGCATTTGCTATATATTTCACAATATGGCAAAAGAGTTGGATGCTGTACTGGATCATGGTGAAGCCAATCCTGCTGCTAGCTGTAAAACAGAGGATCAATCTGTATCTTTCCTTACTCAAATCATTAGTCCGATCTATAAGACACTGGCAGCGGAAGCTGAGAGGAACAATAATGGAAAAGCTGCACATTCATCATGGCGTAATTATGATGACTTCAATGAATATTTCTGGTCACCTACTTGCTTTGAGTTAAGCTGGCCAATGAGGAGCAATTCATCCTTTCTGAGGGAGCCTAAAGGGTCAAAGAGGACTGGTAAAACTAGTTTCGTGGAGCATCGGACTTTTTTTCACTTGTATCGGAGTTTTCACCGCCTCTGGATCTTCTTGGTTTTAATGTTCCAGGCTTTGACCATTATTGCCTTCAACGACGGGCGTATTGATTTAGATACTTTTAAGAGCGTCCTTAGTGTTGGGCCAACATTCGCTATTATGAATTTTTTAGAGAGCCTTTTGGATGTCTTGCTCATGTTTGGAGCTTACACCACTGCTAGAGGCATGGCCATCTCAAGGCTTGTTATTAGGTTCTTCTGGTGGGGCTTGAGCTCTGTATTTGTAACATACTTTTACGTGAAGATTCTTCAAGAGAGAAATGCTCACAGTTCAAATGATTCATTCTATTTTCGGATATATATTCTAGTATTGAGTGTGTATGCTGCTTTACAACTTGTTATGGCATTGTTTCTCAAACTTCCGGCATGTCATAGGCTGTCTGAAATGTCTGATCAATCATTCTTTCAATTTTTTAAGTGGATCTATCAGGAGCGATACTATGTTGGCCGTGGTCTTTATGAGCGAATGAGTGATTATTGCAGATATGTGCTCTATTGGTTGGTGATCCTCGCTGGCAAGTTCACATTTGCTTATTTTCTTCAGATAAAACCACTTGTCAAGCCAACCAATATTATAATTGACCTTCCATCTGTGCAATATTCATGGCATGATTTAATCTCAGAGGACAATAACAATGCCTTGACAGTAGTCAGCCTATGGGCGCCTGTGGTGGCTCTTTATCTCCTGGACATTTATATATGGTACACCCTCTTGTCGGCCATTGTGGGTGGTGTAAAAGGCGCCCGTGCTCGGTTGGGAGAGATACGTTCCCTTGAAATGGTACATAAACGTTTTGAGAGCTTTCCAGAGGCTTTTGTAAAGAATCTTGTCTCTCCACAAACACAAAGGTTGTCCTTCGACAGACAAGCACCTGAGGATCCTCAGTACATGAACAAGAAATATGCAGCCATTTTCTCGCCATTTTGGAATGAGATAATTAAAAGCTTGCGTGAAGAAGACTACATTAGTAATAGGGAGAGGGACTTGCTCTATATTCCTAGCAACACTGGAAGTCTCAGATTGGTTCAGTGGCCTTTGTTTCTTCTAAGTAGTAAGATCTTGTTGGCAGTTGATTTGGCCTTAGATTGCAAAGATACACAAGCAGATCTGTGGAATAGAATTAGTAGAGACGAATACATGAAATATGCAGTTCAAGAATGCTACCATAGTGTTGAAAAGATTTTATATTCCCTGGTTGATGGTGAAGGAAGACTCTGGGTTGAGAGGATTTTCCGTGAGATCAACAATAGTATTCAAGAGGGATCCCTTGTTATAATCTTGCAACTCAAGAAGCTTCCACTCGTTTTATCAAGATTCACAGCGTTGACAGGGCTTCTGACTCAGAATGAAACTCCTGAACTTGCAAAAGGTGCCGCAAAAGCTGTTTATGATCTTTATGAAGTTGTGTCGCATGACCTTCTTTCATCAGACTTGAGGGAGCAGCTTGACACATGGAATATTTTGTTGAGAGCAAGAAATGAAGGTCGCTTGTTCGCTAGAATAGAATGGCCCAAGGATCCAGAAATTATCGAGCTAATCAAGCGGTTGCATCTTCTTCTCACAGTAAAGGATTCTGCAGCTAATATCCCAAAGAATCTTGAATCAAGAAGAAGATTAGAGTTTTTTACAAATTCATTGTTTATGGACATGCCTTCTGCTAAGCCAGTCAGTGAGTCGATTCCATTCAGCGTCTTCACTCCTTACTACAGTGAGACAGTGCTTTATAGTTCCTCTGAATTGGCACTGGAAAACGAGGATGGCATTTCCGTCGTTTTCTATCTTCAGAAGATTTTTCCAGATGAATGGAAAAACTTTTTGGAGCGGATTGGTAGAGGTGAGTCTACTACAGTAGAAGAACTGCAGAAGAGTCCAAGTGATGCTTTGGAGCTTCGGTTTTGGACTTCTTACCGAGGGCAGACTCTAGCTAGGACTGTGCGTGGCATGATGTATTATAGAAGAGCCTTGATGCTACAGAGTTATCTGGAAAGGAGATCGCTTGGAGTGGACAACCATTCTCGATCAAACATACTCACAAGCGAGGGATTTGAGATGTCCCGAGAATCAAGGGCACAAGCAGACCTGAAGTTTACTTATGTGGTCTCATGCCAAATTTATGGGCAACAAAAGCAGAAGAAGCTCCCAGAGGCTGCTGATATTGCTCTTTTGTTGCAAAGGAATGAAGCACTTCGAGTTGCTTTCATCCATGTGGAGGAGAATGGTGCCACTGGTGGGCAAGATTCAAAGGAATTTTATTCAAAGCTTGTTAAAGCTGATGTACACGGAAAAGATCAGGAAATATATTCCATCAAACTTCCTGGAGATCCAAAGTTAGGAGAAGGGAAGCCTGAAAATCAAAACCATGCTATAATCTTTACACGTGGAGATGCTGTTCAAACCATCGATATGAATCAGGATAACTATCTTGAGGAAGCAATGAAAATGAGAAACCTACTGGAGGAATTTCATGGAAATCATGGCATTCGACCTCCAACTATTCTTGGAGTGAGAGAGCATGTTTTCACAGGAAGTGTCTCTTCATTAGCGTGGTTCATGTCCAATCAAGAAACTAGCTTTGTAACCTTGGGACAGCGTGTCTTAGCAAGCCCTCTCAAAGTCAGAATGCACTACGGACATCCCGATGTTTTCGACAGAATATTTCACATAACTCGAGGTGGTATCAGTAAGGCATCGCGTGTTATCAACATTAGTGAGGATATATATGCAGGTTTTAACTCCACATTGAGGCAGGGCAACATTACACACCATGAGTATATACAGGTTGGAAAAGGGAGGGATGTTGGGCTAAATCAGATTGCTCTATTTGAAGGGAAGGTGGCCGGTGGAAATGGGGAGCAAGTCCTCAGTAGGGATATATACAGAGTTGGACAACTTTTTGATTTCTTTAGAATGCTCTCCTTTTACTTCACAACAGTTGGTTACTATGCATGCACAATGATGACTGTCCTTGTCGTTTACATATTCTTATATGGAAGGGTTTACCTGGCCTTTTCCGGACTTGACCGGGCAATTGCTTTGCAAGCACAAATTCTGGGTAACACAGCATTGAGTGCAGTTCTGAATGCTCAATTTTTGCTGCAGATTGGAATTTTCACTGCAATCCCAATGATCATGGGTTTTGTACTTGAACTAGGCTTGCTAAAGGCAGTTTTCAGTTTTATAACAATGCAGCTTCAATTATGTTCAGTCTTCTTCACATTCTCATTAGGCACAAGAACACATTATTTCGGACGCACCATACTTCATGGTGGGGCAAAGTATCGAGCTACTGGTAGAGGCTTTGTTGTCCATCACATTAAATTCGCTGATAATTACAGGCTCTACTCAAGAAGCCATTTCATCAAGGCGCTTGAAGTGGCTCTTCTTCTTATTGTCTACATCGCATATGGGTATTCGGAGGGAGGCGCTGTTACTTTTATTTTATTAACTGTTAGTAGTTGGTTCCTCGTAGTCTCATGGCTCTTTGCTCCTTATATCTTCAATCCTTCTGGTTTCGAGTGGCAAAAGACGGTTGAGGATTTTGATGATTGGACAAGCTGGCTTCTATATAAGGGAGGTGTAGGTGTCAAAGGAGAAAAAAGCTGGGAATCCTGGTGGGATGAAGAGCAGATGCATATCCAAACATTGAGAGGTCGTATATTGGAGACAATTTTAACTGTGAGGTTCTTCATGTTTCAATACGGTGTTGTGTACAAACTCAATCTCACTGGGAAGAGCACATCACTTGCGATATATGGCTTCTCCTGGGTTGCGTTGGTTGGTATTGGCCTTATCTTCAAGATCTTTACCTTTAGTCCCAAAAAATCATCCAACTTCCAGCTCTTTATGAGATTCATACAGGGTGTCACAGCATTATTACTGGTTACTGCACTTGTTCTCATTGTTGCCTTCACCAAGCTTACAATACCGGACTTATTTGCAAGCTTTCTTGCATTTATTCCTACTGGATGGGGCATTATATGTTTGGCTGTTACATGGAAGAAGATAGTGAGAAGCCTCGGCTTGTGGGATTCCGTGCGAGAATTTGCCAGAATGTATGATGCAGGAATGGGTATAATTATTTTCGTCCCTATAGCTATGCTATCATGGTTGCCATTCATTTCCACGTTCCAATCTCGACTTCTCTTCAACCAAGCATTTAGTCGAGGGCTCGAGATCTCTCTCATTCTTGCTGGAAACAAAGCTAACATTCAGAACTAA 5721 42.21 MDRVYDNWERLVRSTLKREQLKNAGQGHERTQSGIAGSVPPSLGKTTNIDAILQAADEIQADDPKVSRILCEQAFSMAQALDPNSDGKGVLQFKTGLMSVIQQKLAKRDGSQIDRNRDIEHLWEFYQRYKRQHRVDDLQREEQKWRESGTLSANLGEMERRYSEMRKVIATLRALVKVMEALSQVADPVGVGRLIKEELARIKKSDANLSAELVSYNIVPLDAPQMTNAIGVFPEVRGAISAIRYTEQLPRLPADHDISGQRNADMFDLLEYVFGFQRDNIRNQRENLVLAIANAQSRLGIPVETDPKIDEKAINEVFLKVLDNYIKWCRYLRIRLVWNSLEAINRDRKLFLLSLYFLIWGEAANVRFLPECICYIFHNMAKELDAVLDHGEANPAASCKTEDQSVSFLTQIISPIYKTLAAEAERNNNGKAAHSSWRNYDDFNEYFWSPTCFELSWPMRSNSSFLREPKGSKRTGKTSFVEHRTFFHLYRSFHRLWIFLVLMFQALTIIAFNDGRIDLDTFKSVLSVGPTFAIMNFLESLLDVLLMFGAYTTARGMAISRLVIRFFWWGLSSVFVTYFYVKILQERNAHSSNDSFYFRIYILVLSVYAALQLVMALFLKLPACHRLSEMSDQSFFQFFKWIYQERYYVGRGLYERMSDYCRYVLYWLVILAGKFTFAYFLQIKPLVKPTNIIIDLPSVQYSWHDLISEDNNNALTVVSLWAPVVALYLLDIYIWYTLLSAIVGGVKGARARLGEIRSLEMVHKRFESFPEAFVKNLVSPQTQRLSFDRQAPEDPQYMNKKYAAIFSPFWNEIIKSLREEDYISNRERDLLYIPSNTGSLRLVQWPLFLLSSKILLAVDLALDCKDTQADLWNRISRDEYMKYAVQECYHSVEKILYSLVDGEGRLWVERIFREINNSIQEGSLVIILQLKKLPLVLSRFTALTGLLTQNETPELAKGAAKAVYDLYEVVSHDLLSSDLREQLDTWNILLRARNEGRLFARIEWPKDPEIIELIKRLHLLLTVKDSAANIPKNLESRRRLEFFTNSLFMDMPSAKPVSESIPFSVFTPYYSETVLYSSSELALENEDGISVVFYLQKIFPDEWKNFLERIGRGESTTVEELQKSPSDALELRFWTSYRGQTLARTVRGMMYYRRALMLQSYLERRSLGVDNHSRSNILTSEGFEMSRESRAQADLKFTYVVSCQIYGQQKQKKLPEAADIALLLQRNEALRVAFIHVEENGATGGQDSKEFYSKLVKADVHGKDQEIYSIKLPGDPKLGEGKPENQNHAIIFTRGDAVQTIDMNQDNYLEEAMKMRNLLEEFHGNHGIRPPTILGVREHVFTGSVSSLAWFMSNQETSFVTLGQRVLASPLKVRMHYGHPDVFDRIFHITRGGISKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDIYRVGQLFDFFRMLSFYFTTVGYYACTMMTVLVVYIFLYGRVYLAFSGLDRAIALQAQILGNTALSAVLNAQFLLQIGIFTAIPMIMGFVLELGLLKAVFSFITMQLQLCSVFFTFSLGTRTHYFGRTILHGGAKYRATGRGFVVHHIKFADNYRLYSRSHFIKALEVALLLIVYIAYGYSEGGAVTFILLTVSSWFLVVSWLFAPYIFNPSGFEWQKTVEDFDDWTSWLLYKGGVGVKGEKSWESWWDEEQMHIQTLRGRILETILTVRFFMFQYGVVYKLNLTGKSTSLAIYGFSWVALVGIGLIFKIFTFSPKKSSNFQLFMRFIQGVTALLLVTALVLIVAFTKLTIPDLFASFLAFIPTGWGIICLAVTWKKIVRSLGLWDSVREFARMYDAGMGIIIFVPIAMLSWLPFISTFQSRLLFNQAFSRGLEISLILAGNKANIQN 1906
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 1293803 1330771 + Conep13aG0021200.1 Cone13ag0207 450594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag0207 1906 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 38 1901 - GO:0005886(PANTHER)|GO:0046527(PANTHER)
Cone13ag0207 1906 SMART FKS1_dom1_2 347 460 IPR026899 -
Cone13ag0207 1906 MobiDBLite consensus disorder prediction 20 42 - -
Cone13ag0207 1906 Pfam 1,3-beta-glucan synthase component 1030 1804 IPR003440 GO:0000148(InterPro)|GO:0003843(InterPro)|GO:0006075(InterPro)|GO:0016020(InterPro)
Cone13ag0207 1906 SUPERFAMILY Calcium ATPase, transmembrane domain M 124 709 IPR023298 -
Cone13ag0207 1906 Coils Coil 278 298 - -
Cone13ag0207 1906 Gene3D - 35 188 IPR023175 -
Cone13ag0207 1906 MobiDBLite consensus disorder prediction 26 42 - -
Cone13ag0207 1906 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 349 457 IPR026899 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag1461 Cone-Chr11:10362277 Cone13ag0207 Cone-Chr13:1293803 0 dispersed
Cone13ag0207 Cone-Chr13:1293803 Cone18ag0130 Cone-Chr18:680357 0 dispersed
Cone13ag0206 Cone-Chr13:1277107 Cone13ag0207 Cone-Chr13:1293803 2.64E-57 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag0207 K11000 - csv:101217890 3275.72