Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag0215 ATGACGACTACGACCACCAGCATAGGCGGATGTGGCGAGGATCGAGTTCTGGCGACGGCTCAGCAGATCGTCAAGAGCCTCAATACTCCCAAAGAGGTCCGCGAGGATATGCTCTTGATCTTCTCCAGCTTCGACAATCGTCTATCCAACATATCTAATCTGATCAACGGCGATGATTCGAAGACAAGAGGGGAGGGGATAGACGAGGGGGAGGAGGAGGAGGATAGCCGGTTTGATGCAGCCGAGAAGGTGATTCTTCGTTGGGGATCCGACGATGTTTCTAGAGCTTCTCTTCCTTGGGAAGACTTTCCGGACGAGGTGGCTGAGTACTTGTCATCTGTCGATGAGATCATCAATTCGATGCAGGATCTTTCGGTCCGTGCGGATTCAGCTGATCTCATGGATAGGGCGGAGAACGCGATCCAGGTCGCCATGTCTAGGCTAGAGGAAGAATTCCGCCATATACTGATCCGAAGCACAGTTCCTCTTGACGCTGACGGCTTATACGGTTCGATCCGTAGAGTTTCTCTCTCCTTCGCTTGCAACGATGGTGAAATTGACGAAGAATTGGAGAGCTTTGGAGAGATAGATCGTGGCTCTGAGCGATTCCATGAGCGAGGGGCTAGTCTGGGAGATGACGTTTTCGTCGATTTGATTCATCCTGAAGCGGTTGTTGAGTTGAAGGAGATAGCGGATCGTATGATTCGATCTGGATATGAAAAGGAGGGTGTTCAGGTTTATAGTAGTGTTCGTCGTGATGCATTGGATGAGTGTTTGGCGATTCTTGGAGTTGAGAGGCTTAGCATTGAAGAGGTTCAGAAAATTGACTGGAAGATTCTAGACGAGAAGATGAAGAAATGGGTTCAAGCTGTTAAGATTTCTGTTCGAGTGCTTTTGACTGGAGAGAAGAGACTATGTGATCAAATCTTTAATGGGTCTGAGGATTGTAAGGAGGTTTGTTTCAATGAGACTGCAAAAGGTTGTTTGATGCAGCTGCTGAATTTTGGTGAGGCAGTGGCTATTGGAAAAAGGTCACCTGAGAAATTATTCAGGATTTTGGACATGTATGATGCTTTAGCTGATGCTTTTCCGGACTTGGAAGCGATGGTTACAGATGAGCTTGTGGTTGGAGAGGCACAAGGAGTGCTCTCTGGACTGAGAGAAGCTGCTAGAGGGACATTTGCAGAGTTTGAGAATGCTGTTAAGAGTGAGACTTCTCGGAAAGCAATGCTAAACGCTGAGATTCACCCGCTTACAAGGTACGTGATGAACTATGTGAAGTTGCTTGTGGAGTATAAAAACACACTGAACTCTCTTTTAGAAAATGGGGCAGAGGAACTGGGTGCTTTGCAGAATGATAAAGGCGAAAATTTGCAGTTAGAAAACATGTCTCCTATAGCTTGTAGACTTTTTTTTCTGCTATCATGTTTGGAGTCGAACCTTGAGGCGAAATCAAGGCTCTATGATGATGGGGCAATGAAATATATCTTTCTTATGAACAATATACTTTACATAGTGCAAAAAGTAAAAGATTCTGAGCTTGGAAAGCTTTTGGGTGATGATTGGGTACGTAAGCGCCGCGGCCAAATTCGCCAATATGCAACAAGTTATCTTAGAGCTTCGTGGATAAAGGTGTTGTCTTACTTAAAGGATGAGGGGATTGGTGGGAGCACTAGTAATGCCTCAAAGGTTGTTTTAAAAGAAAGGTTTAAGAATTTCAATGCCGGGTTTGAGGAAATATATAGGGTCCAAACAGCTTGGAAGGTGCCTGACAATCAACTGAGGGAAGAGCTTAGGATATCTATATCGGAAAAGGTGATTCCAGCTTATCGTGCTTTCATGGGAAGATTTGGAAGTCACCTAGAGGGTGGAAGAAATTCTGGGAAATACATAAAATACTCAGCAGATGATTTAGAACACTATTTACTGGATTTGTTTGAAGGATCACCTGGCGTTCTGCACCACCTCCGAAGAAAAAGTACATAG 1986 44.91 MTTTTTSIGGCGEDRVLATAQQIVKSLNTPKEVREDMLLIFSSFDNRLSNISNLINGDDSKTRGEGIDEGEEEEDSRFDAAEKVILRWGSDDVSRASLPWEDFPDEVAEYLSSVDEIINSMQDLSVRADSADLMDRAENAIQVAMSRLEEEFRHILIRSTVPLDADGLYGSIRRVSLSFACNDGEIDEELESFGEIDRGSERFHERGASLGDDVFVDLIHPEAVVELKEIADRMIRSGYEKEGVQVYSSVRRDALDECLAILGVERLSIEEVQKIDWKILDEKMKKWVQAVKISVRVLLTGEKRLCDQIFNGSEDCKEVCFNETAKGCLMQLLNFGEAVAIGKRSPEKLFRILDMYDALADAFPDLEAMVTDELVVGEAQGVLSGLREAARGTFAEFENAVKSETSRKAMLNAEIHPLTRYVMNYVKLLVEYKNTLNSLLENGAEELGALQNDKGENLQLENMSPIACRLFFLLSCLESNLEAKSRLYDDGAMKYIFLMNNILYIVQKVKDSELGKLLGDDWVRKRRGQIRQYATSYLRASWIKVLSYLKDEGIGGSTSNASKVVLKERFKNFNAGFEEIYRVQTAWKVPDNQLREELRISISEKVIPAYRAFMGRFGSHLEGGRNSGKYIKYSADDLEHYLLDLFEGSPGVLHHLRRKST 661
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 1391865 1394869 + Conep13aG0022000.1 Cone13ag0215 450602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag0215 661 FunFam Exocyst subunit Exo70 family protein 93 654 - -
Cone13ag0215 661 Gene3D Exocyst complex component Exo70 98 652 - -
Cone13ag0215 661 Pfam Exocyst complex component Exo70 N-terminal 78 157 - -
Cone13ag0215 661 Pfam Exo70 exocyst complex subunit C-terminal 285 644 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Cone13ag0215 661 PANTHER EXOCYST COMPLEX PROTEIN EXO70 24 649 IPR004140 GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(InterPro)|GO:0006887(PANTHER)
Cone13ag0215 661 SUPERFAMILY Cullin repeat-like 79 647 IPR016159 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0393 Cone-Chr11:1936486 Cone13ag0215 Cone-Chr13:1391865 7.92E-126 dispersed
Cone11ag1266 Cone-Chr11:9409923 Cone13ag0215 Cone-Chr13:1391865 1.16E-96 dispersed
Cone13ag0215 Cone-Chr13:1391865 Cone20ag1348 Cone-Chr20:8666061 1.69E-144 dispersed
Cone13ag0215 Cone-Chr13:1391865 Cone19ag0206 Cone-Chr19:1303296 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag0215 K07195 - mdm:103454965 961.829