Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag0255 ATGATGGAAAAAGAGAAAAAGCAAGAATCCCCCGCTCCTGCAAATTCTAACTCTCCTCTCCCGCTTCAGGATTTAAAGGAGATAGACAAGGAGCTGGACCTCCGATCCGACGAGCGGGAATTCCCTTTCCCTCGAAGTGTCACTTCCCGGGTGTTGTACATGTTGAACGACATTGCGGCAGGTCCCGCTTATAGGTTCACTGAATGGCTCGAATCGGTCCGTAAACGGAGTGGCCAATACCGCTACTCTGGCTTCCCCAACCGTCCTTTGCGGCCCCAAATCATGCCTTCTGGTGGTGGAGAACCTGTACATGGTGTAAAGAATCCTCCGGCTCCTGAGCAAACCCCAGAAACCAGTTTGTGGGAAAGACTCGGTAAAGCCGCCACCTTGGACATTGACTCGACCCCCATTTTGTGGGACCACCTCTCTTCTCTTCACCACACTGAACATGGTAGCAGCACCGAATTTTCTGAGGATGATATGAATAAGCCCTGTGAGGTAACTGTAAATTCTGGGGGAGTTGTTTTCTTTGCATTATTCAATCAGCCTGAGAATGAAGAAGCATTTCCAAAAGAAGCAGCTGCTGTTATTAAGATTTCATCGTCAAGAATGGCTTCACAATCTGAGCGCCTTGGATATGAATTTGCCAAGTGGCTTGGCGTGCGGAGCCCACAGGCTAGAGTGATTCACAATTGTAGCCAGGAGTGGATCCAGATAAAAGAAGCTGCAGAGAAAGCAAGAGATGTGGCTTGTTCAGAAGGCGATGAGGTTGATGAAATGACGTGCTCAGAACTTTTGGAAGCTCTTGAACTTAGCAGATGCCTTTTCCTGATGAGTTATGTACATGGATCTCCTTTGTTAGAAAGCACAAACGCATTTGAATCTCCTGAAACTTCTGAAAAAATAGCAGCTGCTCTTGGCCGGGTATTGGTGTTAGACCTCGTCATCAGAAACGAAGATAGGCTCCCTTGTCGTCACCTTAGATGGCGAGGAAATTCGGCAAATTTATTATTAGCTGATAAAACAGCATCTACAAATATAGATCCACTTGAGGACACCCTTGATTCTGCCATCAAGAGATTCAGGCCAAGAGTATTTAGGCCACTTAATAAAGAAAGAAGAGCAACTTCCGTAGATAGTAGTCGATTAGGGGTTCCTCATAACCCAGGATTGGTCACAGAGCCCTCTAATCTTGCTGAAATCATGGAATCGCCTAAATCTAGTACTATGAGCTTGAAAACTCCAACTTCTGATGATGAATCAACTCTTTCTGAGTTTCAAGTATTAGCCATTGACTCAGGCGTCCCTCGTAGGCCTCCTGCCGGAAAACGAGCAAATGACCAAGTGACTTATCCGAAACTAGTCGAGTTACTACTCAATAGTTCAGAATACTCTTCTAATTTATTACACGACATTTCTGGAGGAAAACTAGGATTCCCCTCGGTCGAAGAAGATTCCAGCTCAGCGGTGTCTGATCTGCGGGTCCCAGTAATGATGTCAGCCATCCATGAATTCCGGAGTGGGTTCCGAGCTGCTCTTAGAGACCTTCAGGGGTTCCATATATTTCTTCTTACACTCCACCAAAAGTTAGATAGCTTGTTACGGGTTTTTGTGAATATTATAAATAAGATATCGGTTGGGGAATCTGATAAGGATGAATCTTCAGGGCTGGTACGGCCAGAATCGCCTTCACAAGCGGGGCCAGGAGGGGGGGTTCAGTGTCTATCTCCACGTAATAAGGAACGGGTGTTTAATGATAACCATACGGAATTTGAGGCAGAGAATCAGAAAACTTCTTCGAGGTCATCATCTTCTGGGAATAAAGAAAGCTCGGTTTCTACTTCTCCTATGTCAAGAGAGAGTTGGCATGGAAAGTTCTACAGAGGAGGTGGGGAACATATTCGAAGCCTCCGTTTGACAGCAAAGCTTCGAGACTTCCATAGATTTGCCAAGGTTGATGCTGAATCAAATAAAGAATTGGAACAGTGGAACGAAATGCTAAAAAACGATGTGATTAGACTATGCCATGATAACAATTTCAATACAGGATTTTTTGAGGGCAATGATAGTCATACTGTTGTTGATGCTTATGAGTTGAAGGTAAGACTTGAGCACATACTTGAGAGGATTGCACTGATATCAGAGGCTGCAAATACAGAGAGGCCTTCTCTGGTCTTGAGTATGCTCTTCATAGGTGGAGCCTTGGCTGCAAGATCCATGTACACTCTTCAACATTTAGGAATTACTCATATTCTATGCCTTTGCTCGAATGAAATTGGACAGTCGGATTCTCAGTTCCCCGATCTTTTTGAGTACAGAAATTTCTCTATATATGACAACGAAGATACAAACATCAGCACCATCTTTGAAGAAGCTTGTGATTTCATCGATCGTGTTGAACAAATCGGCGGGAAGGTTTTGGTCCATTGCTTTGAAGGGAGAAGTAGAAGTGCCACATTGGTTCTTGCTTACTTAATGCTCAGAAAGAACTTCACTCTACTAGAGGCATGGAATACATTGAAAAGGGTACATAGGCGGGCCCAACCAAACGATGGGTTTGCAAAGACCCTATTAGAACTAGATCGAAAGCTGCATGGAGAAGTATCAATGGAATGGCAACAGAGAAAGCCTATGATGAGAGTTTGCCCTATTTGTGGGAAAAATGCAGGGCTTAGTAGCAGCTCTCTTAAGCTTCATGTGCAGAAATCACACAAGAAGCTATCTTCTGGAAGTGTGGATAGTGCCATGACTATGGAGATACAAAAAGCTTTGAATGCTCTTAAACTTAGCCGGGGCGGAAGTGTTAGCCCGACTCATTTGGACTTGGCTGAATAA 2835 44.44 MMEKEKKQESPAPANSNSPLPLQDLKEIDKELDLRSDEREFPFPRSVTSRVLYMLNDIAAGPAYRFTEWLESVRKRSGQYRYSGFPNRPLRPQIMPSGGGEPVHGVKNPPAPEQTPETSLWERLGKAATLDIDSTPILWDHLSSLHHTEHGSSTEFSEDDMNKPCEVTVNSGGVVFFALFNQPENEEAFPKEAAAVIKISSSRMASQSERLGYEFAKWLGVRSPQARVIHNCSQEWIQIKEAAEKARDVACSEGDEVDEMTCSELLEALELSRCLFLMSYVHGSPLLESTNAFESPETSEKIAAALGRVLVLDLVIRNEDRLPCRHLRWRGNSANLLLADKTASTNIDPLEDTLDSAIKRFRPRVFRPLNKERRATSVDSSRLGVPHNPGLVTEPSNLAEIMESPKSSTMSLKTPTSDDESTLSEFQVLAIDSGVPRRPPAGKRANDQVTYPKLVELLLNSSEYSSNLLHDISGGKLGFPSVEEDSSSAVSDLRVPVMMSAIHEFRSGFRAALRDLQGFHIFLLTLHQKLDSLLRVFVNIINKISVGESDKDESSGLVRPESPSQAGPGGGVQCLSPRNKERVFNDNHTEFEAENQKTSSRSSSSGNKESSVSTSPMSRESWHGKFYRGGGEHIRSLRLTAKLRDFHRFAKVDAESNKELEQWNEMLKNDVIRLCHDNNFNTGFFEGNDSHTVVDAYELKVRLEHILERIALISEAANTERPSLVLSMLFIGGALAARSMYTLQHLGITHILCLCSNEIGQSDSQFPDLFEYRNFSIYDNEDTNISTIFEEACDFIDRVEQIGGKVLVHCFEGRSRSATLVLAYLMLRKNFTLLEAWNTLKRVHRRAQPNDGFAKTLLELDRKLHGEVSMEWQQRKPMMRVCPICGKNAGLSSSSLKLHVQKSHKKLSSGSVDSAMTMEIQKALNALKLSRGGSVSPTHLDLAE 944
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 1750123 1756837 + Conep13aG0026600.1 Cone13ag0255 450642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag0255 944 Gene3D Protein tyrosine phosphatase superfamily 704 876 IPR029021 -
Cone13ag0255 944 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 721 866 IPR029021 -
Cone13ag0255 944 ProSitePatterns Tyrosine specific protein phosphatases active site. 808 818 IPR016130 GO:0016311(InterPro)
Cone13ag0255 944 Pfam Dual specificity phosphatase, catalytic domain 732 862 IPR000340 GO:0016311(InterPro)
Cone13ag0255 944 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 4 939 IPR035010 GO:0004721(InterPro)|GO:0009737(InterPro)|GO:0043622(InterPro)
Cone13ag0255 944 SUPERFAMILY Protein kinase-like (PK-like) 68 449 IPR011009 -
Cone13ag0255 944 Pfam Actin-fragmin kinase, catalytic 118 346 IPR015275 -
Cone13ag0255 944 Gene3D - 285 383 IPR036940 -
Cone13ag0255 944 MobiDBLite consensus disorder prediction 596 620 - -
Cone13ag0255 944 MobiDBLite consensus disorder prediction 96 116 - -
Cone13ag0255 944 FunFam Dual specificity protein phosphatase PHS1 693 867 - -
Cone13ag0255 944 SMART dsp_5 721 863 IPR020422 GO:0006470(InterPro)
Cone13ag0255 944 MobiDBLite consensus disorder prediction 1 24 - -
Cone13ag0255 944 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 790 842 IPR000387 GO:0016311(InterPro)
Cone13ag0255 944 MobiDBLite consensus disorder prediction 550 624 - -
Cone13ag0255 944 CDD DSP 722 859 - -
Cone13ag0255 944 MobiDBLite consensus disorder prediction 581 595 - -
Cone13ag0255 944 ProSiteProfiles Dual specificity protein phosphatase domain profile. 721 866 IPR020422 GO:0006470(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0255 Cone-Chr13:1750123 Cone14ag0823 Cone-Chr14:5002363 7.24E-25 dispersed
Cone13ag0255 Cone-Chr13:1750123 Cone12ag0682 Cone-Chr12:6241913 1.87E-13 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag0255 K14165 - cit:102630871 1317.75