Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag0285 ATGAATCCCTCATCCAATCACAGCCCGAAGGAACATGTTGAAAATAGCAGCTCAATACCGGCTGTTAATAGCCCTCAAGCCAATTCATCTTTGAACGGTGACTCTTCTTCATTTCGGGGAGAAGGAAAGCAAAAATTCATAGAAGACTTGAAATTTCAACGCCCTTTATGTAATCCGATCATATCGGGTATGATCTCTTTCTTTCTCCAACTGATAATAAAAAGTGAATGTGTTCTGACTTTACTTGATAATTTTTCTAAAGAGCCATCAGGAGTTACATCACCAACTCTTAATCATGTGGGCCATTCATACCATGATGTGTTTCAACTGAAACAAGAACGTTATTTGGATCTTTCGTCTGCTAAAATTTCCGAGATGATGAAAACAAATTGTTTAGATAATGCCCCAACGCAATCACTTTTGAGTGTCGTGAACGGAATTCTGAACGAAAGCATCGAAAGAAAGAATGGGGAAATACCTCATCAAAATACTCTTTATAAGGCTCGTGAAGAGAAGTATCAGTCGAGGATAAGAGTACTCGAGGCTCTTGCTGCCAGTAATAATGAAGAGACTCAGATTGAGAAGATCAAAATTGAAGAAAAAAAGAGGAATGAAGAAAAGGAAAGGATTGAGTTGATGAAAGAAAAAGATCAAAACAATAATCAAGAGATTTCAGCGTTGAAGGAAGAATTGGAAATAGCTAGAAAAACATATGAAGTAAGATGCATACAAATGGAAACAGAATATAAGGGTGCTAAAGCAAAAGTAGAGGAGAGGTTAAAAGAAGTTGAGTCTCTCTTCGAAGATTCGAGGAATAAGGTTCATGAGCTTGAGGCATCTTCCATGTCAAAGTCTCAAAGGTGGAACACCAAAGAGCACACTTTACGAAGTTTAGTGGACTTTCAACTTGGTTCATTGCAGAAATTGAGGTTTTCCTCTGATTCTATCAAACAAGAACTTGTGAAAGCTCAAGTGAAGTATAAAAGTGAATATAATCTCTTAGAAATGAAGTTTAAGTCCTTAGGGGGTGCGGTTGAGAACTATAATGTACTTCTAGCCGAAAACAGGAAGATGTTAAATGAACTTCAAGAGTTGAAAGGGAATATTAGGGTATATTGTCGTATAAGACCCTTTTTGCCTGGGCAGCAAGAGAAAAAGACAATCATAGAACATATAGGTGAAAATGGAGATTTAGTTGTTGCAAATCCCTCCAAGCTAGGGAGAGATGGTCAGCGGTCGTTCAAGTTTAATAAGGTGTTTGGTCCGGCTGCCACTCAAGGAGAGGTATTTTCTGATACTCAACCCTTGATTCAATCAGTACTTGATGGGTACAATGTCTGCATATTTGCTTATGGACAAACTGGTTCGGGAAAGACATACACAATGACCGGTCCTAGTGCGTCCTCTAAAGAAGATTGGGGAGTTAATTATCGAGCACTAAATGATCTCTTTAGTATCTCTAAAAGCAGATGTAGCTCCATCATGTACAATATCGGTGTTCAAATGGTTGAAATATACAATGAACAAACCATAGTTTTCCTTAATTTGCACACACTTGGGATTTTGACTCACTCTCAACCTAATGGTCTAGCCGTACCAGATGCTAGCATGAACCCAGTCAAATCAACAGCAGATGTTATAGAACTAATGGAAATTGGTCTAAAGAATAGATCAGTTGGTGCGACTGCCATGAACGAAAGAAGTAGCCGTTCACATAGTATCGTCACAGTTCATGTTCGTGGGACGGATTTGAAGACGGGTACCGCCTTGCATGGTAATCTTCATTTGGTAGATCTTGCAGGAAGTGAGAGGGTTGATCGCTCCGAGGTAACCGGAGATAGGCTTAAGGAAGCACAACATATTAACAAATCACTATCTGCCCTTGGAGATGTGATTTTTGCTCTGGCACAAAAGAACTCTCATGTACCATACAGAAATAGCAAGCTCACTCAAATTCTTCAAAGCTCCTTAGGGGGTCAAGCAAAGACACTAATGTTTGTACAACTTAATCCTGATATGAATTCATTTTCCGAATCTCTAAGTACATTAAAATTTGCCGAAAGGGTCTCCGGCGTTGAGCTTGGTGCTGCCCGAAGCAGTCGAGAAGGACGAGATGTGAGGGAGTTAATGGAGAAGGTGGCCTCTCTCAAAGAAGCTATTTCAAGAAAGGACGAGGAAATCGAGCGGTTGCAATTACTTAAAGATCTAAAATACGTCTATCCAGGTGAGAAGCATGGGGCTGGCTCATTGGGGTCGGGATCTTCCTCTCCAGGCATAGACATGGGAAGTGGAATTCCTCGAATTCAAAATCCATCACCTGGGAAAGGCTTTGGAAATAACATGAAATTTATTTTCGATAACTGTTCAGAGATTAGTGACATGATTTCAGAAGCCGATTCCCAACATTCTAAAAGTGGTCTTGCGGATGAGGAGAACACAGGAATATTCAAATCCCCAGATGAGGAGAGATTAAGTTATATATCTGACACTGACCATTCAGATCGGTCAAAATCACTACCAACTACACCTAGACCCTTAAAAACACCAGGAAAATCAGCATCAGCTACTTCTTTAAAAGGGTCAGCAAGTAGGAAAAATGTTGTAGCCGAACCTAATAGTAAGTCTGGTCGACGGTGGCAGTAA 2643 40.03 MNPSSNHSPKEHVENSSSIPAVNSPQANSSLNGDSSSFRGEGKQKFIEDLKFQRPLCNPIISGMISFFLQLIIKSECVLTLLDNFSKEPSGVTSPTLNHVGHSYHDVFQLKQERYLDLSSAKISEMMKTNCLDNAPTQSLLSVVNGILNESIERKNGEIPHQNTLYKAREEKYQSRIRVLEALAASNNEETQIEKIKIEEKKRNEEKERIELMKEKDQNNNQEISALKEELEIARKTYEVRCIQMETEYKGAKAKVEERLKEVESLFEDSRNKVHELEASSMSKSQRWNTKEHTLRSLVDFQLGSLQKLRFSSDSIKQELVKAQVKYKSEYNLLEMKFKSLGGAVENYNVLLAENRKMLNELQELKGNIRVYCRIRPFLPGQQEKKTIIEHIGENGDLVVANPSKLGRDGQRSFKFNKVFGPAATQGEVFSDTQPLIQSVLDGYNVCIFAYGQTGSGKTYTMTGPSASSKEDWGVNYRALNDLFSISKSRCSSIMYNIGVQMVEIYNEQTIVFLNLHTLGILTHSQPNGLAVPDASMNPVKSTADVIELMEIGLKNRSVGATAMNERSSRSHSIVTVHVRGTDLKTGTALHGNLHLVDLAGSERVDRSEVTGDRLKEAQHINKSLSALGDVIFALAQKNSHVPYRNSKLTQILQSSLGGQAKTLMFVQLNPDMNSFSESLSTLKFAERVSGVELGAARSSREGRDVRELMEKVASLKEAISRKDEEIERLQLLKDLKYVYPGEKHGAGSLGSGSSSPGIDMGSGIPRIQNPSPGKGFGNNMKFIFDNCSEISDMISEADSQHSKSGLADEENTGIFKSPDEERLSYISDTDHSDRSKSLPTTPRPLKTPGKSASATSLKGSASRKNVVAEPNSKSGRRWQ 880
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 2125706 2131093 - Conep13aG0030300.1 Cone13ag0285 450672

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag0285 880 Gene3D - 203 246 - -
Cone13ag0285 880 PANTHER KINESIN-LIKE PROTEIN KLP-3 248 817 IPR027640 GO:0003777(InterPro)|GO:0007017(PANTHER)|GO:0007018(InterPro)|GO:0008017(PANTHER)|GO:0015630(PANTHER)
Cone13ag0285 880 Coils Coil 188 248 - -
Cone13ag0285 880 Coils Coil 345 368 - -
Cone13ag0285 880 Coils Coil 706 736 - -
Cone13ag0285 880 Gene3D Kinesin motor domain 310 694 IPR036961 -
Cone13ag0285 880 ProSiteProfiles Kinesin motor domain profile. 368 692 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone13ag0285 880 SMART kinesin_4 366 700 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone13ag0285 880 MobiDBLite consensus disorder prediction 1 39 - -
Cone13ag0285 880 Pfam Kinesin motor domain 374 690 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone13ag0285 880 PRINTS Kinesin heavy chain signature 642 663 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone13ag0285 880 PRINTS Kinesin heavy chain signature 593 611 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone13ag0285 880 PRINTS Kinesin heavy chain signature 443 464 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone13ag0285 880 PRINTS Kinesin heavy chain signature 562 579 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone13ag0285 880 Coils Coil 253 280 - -
Cone13ag0285 880 MobiDBLite consensus disorder prediction 796 880 - -
Cone13ag0285 880 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein with CH (Calponin Homology) domain 310 520 - -
Cone13ag0285 880 MobiDBLite consensus disorder prediction 814 838 - -
Cone13ag0285 880 FunFam Kinesin-related protein3 529 734 - -
Cone13ag0285 880 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 368 730 IPR027417 -
Cone13ag0285 880 MobiDBLite consensus disorder prediction 839 870 - -
Cone13ag0285 880 MobiDBLite consensus disorder prediction 746 776 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag0285 K27887 - - cit:102626520 912.524
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0307 Cone-Chr12:1672115 Cone13ag0285 Cone-Chr13:2125706 2.94E-255 dispersed
Cone13ag0285 Cone-Chr13:2125706 Cone15ag1267 Cone-Chr15:9978720 3.82E-157 dispersed
Cone13ag0285 Cone-Chr13:2125706 Cone8ag0301 Cone-Chr8:1741996 3.01E-255 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g325 . . Bda06g00804 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone13ag0285 . . . . . . Blo15g00073 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002869 5 3 4 3 3 1 2 1 1 1 1 1 2 1 1 2 1 3 2 1 1 1 1 1 1 1 1 5 1 2 54