Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag0286 ATGCGGATGAGTTGTAATGGATGCAGAGTACTTCGCAAAGGCTGCAATGAAAATTGCTCCATTAGACCCTGTCTTCAGTGGATCAAAACATCTCAATCCCAAGCAAACGCCACCGTTTTTCTCGCCAAGTTTTATGGCCGAGCCGGCCTAATTAACCTCATCAATGCCGGACCAGAACCTCACCGACCTGCGATATTTAAATCGTTGCTATACGAAGCATGCGGCCGGATAGTGAACCCGATTTACGGTTCATCTGGGTTGTTGTGGACAGGAAGCTGGCAGATCTGCCAAGCCGCCGTGGAAGCCGTTCTAAAAGGTGCGTCCATAATGCCTATTTCTTCCGAATCGGCTGGGAGCCATATGAGCCCACCTCTGAAAGCATGTGATATTCGGCACGTTTCAAAGGATGATAACTTTGGACCATCTCATAAGATTCGTAAGGTGAACAAATCTCGCAACCGGTTCAAGCGATCGGGTGTGAAAAAGCTGAAACCGCGGAAAGCTGTGCCGGGGATGGCTACCGAGTTGAGATTTGACGAGTCGAGCAGGATTGAATGGCCAAAGTGTTGTAAAATCGAGATAGATGGGTCGGCGAGTCATGATGAGTCGGAGAAGACTCATCCTCGTCCGAGTCGAGGTGGTGAAAGCGGCGGCGAGGCTGATTGCGTGTCCGTTGAGACAGTCGAAGTTTCGGCTGTCAAATCGGCGGAGGAGCGAGATGATTGCAGTGACGTGGAGCTGGAGCTAACGCTGGGCCGACACTGGAATAGTAGCCCATATCCAGAAGGGCATGAAACCGTGGACGGTGCGGATGATGACACGTATCATCTACGAACGGGGATTGATCTTCCTCCTGTTCGAAGTTCATAG 870 50.92 MRMSCNGCRVLRKGCNENCSIRPCLQWIKTSQSQANATVFLAKFYGRAGLINLINAGPEPHRPAIFKSLLYEACGRIVNPIYGSSGLLWTGSWQICQAAVEAVLKGASIMPISSESAGSHMSPPLKACDIRHVSKDDNFGPSHKIRKVNKSRNRFKRSGVKKLKPRKAVPGMATELRFDESSRIEWPKCCKIEIDGSASHDESEKTHPRPSRGGESGGEADCVSVETVEVSAVKSAEERDDCSDVELELTLGRHWNSSPYPEGHETVDGADDDTYHLRTGIDLPPVRSS 289
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 2136062 2137309 + Conep13aG0030400.1 Cone13ag0286 450673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag0286 289 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Cone13ag0286 289 MobiDBLite consensus disorder prediction 195 222 - -
Cone13ag0286 289 MobiDBLite consensus disorder prediction 195 214 - -
Cone13ag0286 289 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 252 - GO:0010468(PANTHER)
Cone13ag0286 289 Pfam Lateral organ boundaries (LOB) domain 4 102 IPR004883 -
Cone13ag0286 289 MobiDBLite consensus disorder prediction 254 289 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0286 Cone-Chr13:2136062 Cone19ag0834 Cone-Chr19:6592100 1.33E-53 dispersed
Cone13ag0286 Cone-Chr13:2136062 Cone19ag0280 Cone-Chr19:2004222 7.03E-174 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44585 PF03081 Exo70 5.70E-128 CL0295 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag0286 - - - 0.0