Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag0319 ATGAGTTCTCTTTTTTCTTCCTCTGCTCATGCCGGCGGCGGCCACGGCGACAGCAAGGGTCGATCGTTAATGGAGAATCTTCTTGGCCTTCTCAGAATTCGAGTTAAACGTGGCGTTAATCTCGCCGTTCGTGATGTTCGCACCAGCGATCCTTACGTCGTCGTTAAGATGGGGAGACAGAAACTGAAGACGCGTGTGATTAAGAAGGATGTTAATCCCGAGTGGAACGAAGACCTGACTCTTTCTGTTCTAGATCCAGATCTTCCCGTTAAGCTCACTGTATATGATCACGATACATTCAGCAAGGATGACAAAATGGGGGAAGCAGAGTTTGACATTAGACCATACATAGAGGCTTTGAAGATGCATCTGGAAGAGCTCCCAAGTGGGGTCACAATCACGAGAATAACACCCGACAGGAAGAACTGCTTGGCGGAAGAGAGCCGTATTGTCTGGGCAGAGGGTAAGGTGATCCAAGATCTCTGCCTTAGATTGAAAAATGTTGAATGTGGTGAAGTGGAAATCCAATTGCAATGGATTGACCTTCCTGGATCTAAGGGGTTATGA 567 47.27 MSSLFSSSAHAGGGHGDSKGRSLMENLLGLLRIRVKRGVNLAVRDVRTSDPYVVVKMGRQKLKTRVIKKDVNPEWNEDLTLSVLDPDLPVKLTVYDHDTFSKDDKMGEAEFDIRPYIEALKMHLEELPSGVTITRITPDRKNCLAEESRIVWAEGKVIQDLCLRLKNVECGEVEIQLQWIDLPGSKGL 188
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
13 2629010 2630900 + Conep13aG0033800.1 Cone13ag0319 450706
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag0319 188 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 25 180 IPR035892 -
Cone13ag0319 188 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 24 186 IPR044562 -
Cone13ag0319 188 Pfam C2 domain 29 115 IPR000008 -
Cone13ag0319 188 SMART C2_3c 30 136 IPR000008 -
Cone13ag0319 188 Gene3D C2 domain 25 186 IPR035892 -
Cone13ag0319 188 CDD C2_ArfGAP 28 171 - -
Cone13ag0319 188 ProSiteProfiles C2 domain profile. 15 127 IPR000008 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0281 Cone-Chr11:1364173 Cone13ag0319 Cone-Chr13:2629010 2.44E-72 dispersed
Cone13ag0319 Cone-Chr13:2629010 Cone2ag0473 Cone-Chr2:2544059 5.69E-81 dispersed
Cone13ag0319 Cone-Chr13:2629010 Cone16ag0530 Cone-Chr16:7333253 7.18E-82 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag0319 - - - 0.0