Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag0367 ATGGCTTCTGCTTATGCTTCTTCTGCCATTGCAGCTGTGGCAGTCTCTTCTATCAGTTCCGGCCAGAAGAGTAAGACTTCTTTCCTGAGTGGGAAGATCTTAAGAGTGAAAAACTACACAGCACCACCGGCGGCAGCCACACGTTCGCCGGCTTTATGTGCGGCGGCTGACCCTGATAGACCAATCTGGTTCCCCGGCAGCACTCCTCCTCCATGGCTCGACGGTAGCCTCCCCGGAGACTTTGGTTTCGATCCTCTTGGTCTTGGATCCGACCCGGAAAGCCTAAGGTGGAACCAGCAAGCGGAGCTAGTGCACTGCAGGTGGGCCATGTTAGGAGCAGCTGGAATTTTCATTCCAGAATTTCTCACAAAGATCGGAATTCTAAACACTCCGTCATGGTACACAGCTGGAGAACTGGAATATTTCACCGACACAACCACCCTTTTTGTAATTGAGCTGGTTTTGATCGGTTGGGCCGAGGGGAGAAGATGGGCCGATATTCTTAAGCCCGGAAGTGTGAACACGGACCCGATCTTCCCTAACAACAAGCTCACGGGGACTGATGTGGGCTACCCGGGTGGGCTTTGGTTCGACCCGCTTGGATGGGGAAGCGGGTCACCCGAAAAGATCAAGGAGTTGAGAACCAAGGAGATTAAGAACGGGAGATTGGCCATGTTGGCTGTTATCGGTGCCTGGTTCCAACACATTTATACTGGGACTGGTCCCATTGATAATCTCTTTGCCCACCTTGCCGATCCGGGTCATGCTACCATTTTCGCGGCTTTCACTCCAAAATGA 798 52.51 MASAYASSAIAAVAVSSISSGQKSKTSFLSGKILRVKNYTAPPAAATRSPALCAAADPDRPIWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFVIELVLIGWAEGRRWADILKPGSVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVIGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFTPK 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 3363953 3365448 + Conep13aG0038700.1 Cone13ag0367 450754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag0367 265 Gene3D Chlorophyll a/b binding protein domain 70 255 - -
Cone13ag0367 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 14 260 IPR001344 GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0016020(InterPro)
Cone13ag0367 265 SUPERFAMILY Chlorophyll a-b binding protein 55 263 - -
Cone13ag0367 265 FunFam Chlorophyll a-b binding protein, chloroplastic 70 255 - -
Cone13ag0367 265 Pfam Chlorophyll A-B binding protein 69 235 IPR022796 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0808 Cone-Chr12:7362530 Cone13ag0367 Cone-Chr13:3363953 1.07E-168 dispersed
Cone13ag0367 Cone-Chr13:3363953 Cone8ag0754 Cone-Chr8:7634588 2.14E-168 dispersed
Cone4ag0830 Cone-Chr4:5333628 Cone13ag0367 Cone-Chr13:3363953 1.03E-109 transposed
Cone13ag0367 Cone-Chr13:3363953 Cone3ag0950 Cone-Chr3:4942721 2.56E-38 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag0367 K08908 - csv:101214055 465.307