Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone13ag0373 | ATGAGGGATGTTTTTGGTGGATATTTCTCATTAGGGATCACTACATTATGTTTCATTGCTTTTCTAGCATATCTTATAAGAGATCAGAAAAAGAATGCATCAGATAGAATACCTCCAGGAAGAAGAGGATGGCCGATAATTGGTGACAGCATAAGCTGGTACAAAGCGGTTGCTGGGCCTCACCCTCCTCGCTTTGTCGAACAACAAGTCAAAAGGTATGGGAAGATATTTTCATGTAGTCTGTTCGGTAAGTGGGCAGTGGTATCAGCCGACCCGAGCTTTAACCGTTTCGTGATGCAAAATGAAGGAAAGTTGTTCCAATCAAGCTATCCAAAATCTTTTAAGGATTTGGTTGGAAAAAACGGTGTTATCACTGCACAAGGAGAACAGCAGAGGAAGCTCCATTCCATTGCCTCTAATATGATGCGCATGGAGAAACTCAAGCTTCACTTCTTGGACCGTATCCAATCAGTTATGGTTCATACCTTGACCAATTTCCATGACAATCAAGTCATACTCTTACAAGATGTTTGTCGAAAGGTTGCAATTAATCTAATGGTTAATCAACTATTGGGAGTGTCAAGCGAATCAGATGTCAACGAGATGGCTCAATTGTTCTCTTACTTCGTTGATGGCTGTCTCTCTTTTCCCATCAATTTTCCGGGCTCTGCATACCACACTGCTATGAAGGCAAGGGAGAAAATAAAAGGCAAGATAAATTATACAATTGAGAATCATAGGCAGCAGCAAGGGGCAAAGGATATAGAAGGCAATGGGCTACTTGGTAGATTGATAGAGGAAGGCAGCTTGGTTGATGAAGCAGTAGCTGATTTCATAATAAATCTTTTGTTTGCCGGGAATGAAACGACGGCTAAAACTATGCTTTTTGCACTCTATTTTCTAACTCATTGTCCCGAGGCAATGAAGCAAGTGCAGGATGAACAAGACAGTCTTGTAGGAGACGGCAAACTTTCATGGGACGATTACAAAGCGATGTCATTCACTCAGTGTGTTATTGATGAAACCCTTCGGCTTGCCGGCATTGCAATTTGGTTGATAAGAGAGGCAAAAGAAGATGTTAAATACCAAGAGTATGTAATTCCCAAAGGATGGTTCGTGGTACCGTTTCTTTCGGCCGTTCACCTGGACGAGAATTTGTATGAGGAAGCTCTCGAATTCAACCCTTGGAGATGGATGAACCCTCAAAATAAGGAGAAGAGAAATTGGAGGAGCAGTCCATTCTATTCCCCATTTGGAGGAGGCACCCGATTTTGTCCGGGAGCCGACTTGGCTCGCCTTCAGATTGCTTTGTTTCTCCATTCCTTTGTTACTAGATACAGGTGGACCCAAGTTAAAGAAGATAGAATATCCTTCTTTCCATCTGCTCGGCTCTTGAATGGTTTCCAAGTTTGCTTGACTAGGCGATGA | 1428 | 42.51 | MRDVFGGYFSLGITTLCFIAFLAYLIRDQKKNASDRIPPGRRGWPIIGDSISWYKAVAGPHPPRFVEQQVKRYGKIFSCSLFGKWAVVSADPSFNRFVMQNEGKLFQSSYPKSFKDLVGKNGVITAQGEQQRKLHSIASNMMRMEKLKLHFLDRIQSVMVHTLTNFHDNQVILLQDVCRKVAINLMVNQLLGVSSESDVNEMAQLFSYFVDGCLSFPINFPGSAYHTAMKAREKIKGKINYTIENHRQQQGAKDIEGNGLLGRLIEEGSLVDEAVADFIINLLFAGNETTAKTMLFALYFLTHCPEAMKQVQDEQDSLVGDGKLSWDDYKAMSFTQCVIDETLRLAGIAIWLIREAKEDVKYQEYVIPKGWFVVPFLSAVHLDENLYEEALEFNPWRWMNPQNKEKRNWRSSPFYSPFGGGTRFCPGADLARLQIALFLHSFVTRYRWTQVKEDRISFFPSARLLNGFQVCLTRR | 475 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 13 | 3396909 | 3399223 | - | Conep13aG0039300.1 | Cone13ag0373 | 450760 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone13ag0373 | 475 | PRINTS | P450 superfamily signature | 416 | 425 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0373 | 475 | PRINTS | P450 superfamily signature | 425 | 436 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0373 | 475 | PRINTS | P450 superfamily signature | 285 | 302 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0373 | 475 | PRINTS | P450 superfamily signature | 337 | 348 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0373 | 475 | Gene3D | Cytochrome P450 | 26 | 473 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0373 | 475 | Pfam | Cytochrome P450 | 38 | 455 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0373 | 475 | CDD | CYP90-like | 69 | 474 | - | - | |
| Cone13ag0373 | 475 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 418 | 427 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone13ag0373 | 475 | PANTHER | CYTOCHROME P450 26 | 36 | 446 | - | GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER) | |
| Cone13ag0373 | 475 | SUPERFAMILY | Cytochrome P450 | 36 | 475 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0373 | 475 | PRINTS | E-class P450 group I signature | 415 | 425 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0373 | 475 | PRINTS | E-class P450 group I signature | 425 | 448 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0373 | 475 | PRINTS | E-class P450 group I signature | 376 | 400 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0373 | 475 | PRINTS | E-class P450 group I signature | 274 | 291 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0373 | 475 | PRINTS | E-class P450 group I signature | 70 | 89 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0373 | 475 | PRINTS | E-class P450 group I signature | 294 | 320 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone13ag0373 | 475 | PRINTS | E-class P450 group I signature | 336 | 354 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone13ag0373 | Cone-Chr13:3396909 | Cone8ag0806 | Cone-Chr8:8116467 | 2.48E-102 | dispersed | |
| Cone13ag0373 | Cone-Chr13:3396909 | Cone1ag1219 | Cone-Chr1:55977119 | 9.27E-94 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone13ag0373 | - | - | - | 0.0 |