Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone13ag0433 | ATGGCTTCTGGTGCTCGCTTAGTTGTATCGGATTTTACCATGTCTTTCATGTGGGTTTGGTCGAGTGTTCTGATTAAGCTGTTTGTGGTCAACGTTTGTGGATTTGGTGTTCATGAACCAAGGGGTGAGATTATCAAGGCTTCTCTCTCTATTGCCAACATGTTTTTCTTTGCTTTCTTGGTCAAGATTACTAAAGGCGGTAGTTATAATCCTCTCACCCTCCTGTCTTCTGCTCTTTCTGGCGATTTCAGCCGCTTCCTTTTCACTTTTGGGGCCAGAATCCCTGCTCAGGTAATTGGATCTATAAGTGGGGTGAGACTGATCATAGAGACATTTCCTCAGATAAAACGAGGGCCGAGTTTGAACGTCGATATTCATCAAGGTGCCTTAACAGAAGGGTTGTTGACTTTCGCAATTGTTTTAATCTCACAAGGACTTTCCAGAAAAATCCCTCATCAGGACTCCTTCATGAAGACTTGGATTTCTAGTATCTCTAAATTTACTCTTCATATCCTTGGCTCCGATCTCACTGGTGGTTGTATGAACCCCGCCTCTGTGATGGGATGGGCTTATGCACGTGGGGAACACATAACAAAGGAGCATATACTTGTGTACTGGCTTGCCCCAGTAGAAGGAACTCTACTAGCAGTGTGGACTTTTAGGTTACTGATTCGGCAAACCAAAGAGGACAAACTCATGAGTTTAAAGAGTAAATCAGAATGA | 723 | 43.43 | MASGARLVVSDFTMSFMWVWSSVLIKLFVVNVCGFGVHEPRGEIIKASLSIANMFFFAFLVKITKGGSYNPLTLLSSALSGDFSRFLFTFGARIPAQVIGSISGVRLIIETFPQIKRGPSLNVDIHQGALTEGLLTFAIVLISQGLSRKIPHQDSFMKTWISSISKFTLHILGSDLTGGCMNPASVMGWAYARGEHITKEHILVYWLAPVEGTLLAVWTFRLLIRQTKEDKLMSLKSKSE | 240 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 3995528 | 3997415 | + | Conep13aG0045300.1 | Cone13ag0433 | 450820 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone13ag0433 | 240 | PRINTS | Major intrinsic protein family signature | 89 | 108 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone13ag0433 | 240 | PRINTS | Major intrinsic protein family signature | 163 | 185 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone13ag0433 | 240 | PRINTS | Major intrinsic protein family signature | 131 | 149 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone13ag0433 | 240 | PRINTS | Major intrinsic protein family signature | 6 | 25 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone13ag0433 | 240 | PRINTS | Major intrinsic protein family signature | 203 | 223 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone13ag0433 | 240 | Gene3D | Glycerol uptake facilitator protein. | 2 | 239 | IPR023271 | - | |
Cone13ag0433 | 240 | SUPERFAMILY | Aquaporin-like | 9 | 231 | IPR023271 | - | |
Cone13ag0433 | 240 | Pfam | Major intrinsic protein | 6 | 219 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone13ag0433 | 240 | PANTHER | AQUAPORIN SIP2-1-RELATED | 3 | 238 | IPR044226 | GO:0015267(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone12ag0696 | Cone-Chr12:6370067 | Cone13ag0433 | Cone-Chr13:3995528 | 1.43E-31 | dispersed | |
Cone13ag0433 | Cone-Chr13:3995528 | Cone8ag0723 | Cone-Chr8:7278339 | 6.65E-37 | dispersed | |
Cone10ag0486 | Cone-Chr10:2255023 | Cone13ag0433 | Cone-Chr13:3995528 | 3.11E-103 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone13ag0433 | K09875 | - | rcu:8289527 | 348.977 |