Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone13ag0453 ATGGAGTTGGTTGCGGAGAAGAAGGAATCGGAGAGTCCGAACGGTGAGAACAATGGAAATAGTGTACAAACAGTTGTCGATTCTTCTTCTCAGTCAGGCGTTGCTCATAATAGCAGTAGCGATAGCAATACTAACTTTAAAGAAGCCGACGATTTTCGTGAGCGCGTAGGTCACGTCCTCAAAGCTGGACTCCATCCCCTCAAGCAAAAGTTTGTATTTTGGTACACTCGTCGAACTCCTGGCCTTCGAACTCAAACTTCATATGAGGACAATATAAAGAAGATTGTAGACTTCAGTACGGTTGAAGGGTTTTGGGTAAGCTATTGCCACCTGGCCCGTCCTTCTTCTTTGCCGAGCCCAACAGATTTGCATCTTTTCAGGGATGGAATCCGCCCATTATGGGAGGACTCAGCTAACTGCAATGGTGGAAAGTGGATAATACGATTCAAAAAGGTTGTCTCGGGCCGCTTCTGGGAGGATCTGGTTCTTGCTTTAGTGGGTGACCAGCTAGATTATGGAGACAACATATGTGGTGCTGTGCTAAGCATCCGTTTCAATGAAGACATTGTGAGCGTGTGGAACTGTAATGCCTCGGACCATCAGGCAGTCATGGCTTTGAGAGATGCAATCAAACGGCACTTAAAGCTTCCTCACAGCTATGTGATGGAATACAAGCCCCATGATGCTTCTCTGCGTGACAACTCATCTTACAGGAACACATGGTTACGTGGCTAG 735 46.67 MELVAEKKESESPNGENNGNSVQTVVDSSSQSGVAHNSSSDSNTNFKEADDFRERVGHVLKAGLHPLKQKFVFWYTRRTPGLRTQTSYEDNIKKIVDFSTVEGFWVSYCHLARPSSLPSPTDLHLFRDGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDIVSVWNCNASDHQAVMALRDAIKRHLKLPHSYVMEYKPHDASLRDNSSYRNTWLRG 244
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 4772963 4783195 - Conep13aG0047300.1 Cone13ag0453 450840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone13ag0453 244 Pfam Eukaryotic initiation factor 4E 66 224 IPR001040 GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0006413(InterPro)
Cone13ag0453 244 ProSitePatterns Eukaryotic initiation factor 4E signature. 122 145 IPR019770 GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0006413(InterPro)
Cone13ag0453 244 SUPERFAMILY eIF4e-like 41 240 IPR023398 -
Cone13ag0453 244 Gene3D RNA Cap, Translation Initiation Factor Eif4e 24 238 IPR023398 -
Cone13ag0453 244 MobiDBLite consensus disorder prediction 14 45 - -
Cone13ag0453 244 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 33 232 IPR001040 GO:0000340(PANTHER)|GO:0003723(InterPro)|GO:0003743(PANTHER)|GO:0003743(InterPro)|GO:0006413(InterPro)|GO:0016281(PANTHER)
Cone13ag0453 244 MobiDBLite consensus disorder prediction 1 46 - -
Cone13ag0453 244 FunFam Eukaryotic translation initiation factor NCBP 36 237 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0453 Cone-Chr13:4772963 Cone19ag0360 Cone-Chr19:2988873 3.27E-173 dispersed
Cone13ag0453 Cone-Chr13:4772963 Cone9ag0931 Cone-Chr9:4570020 2.20E-34 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone13ag0453 K03259 - csv:101204290 392.504